Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:20:34 (2280396): wrapper (7.7.26015): starting
13:20:34 (2280396): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:20:34] Arguments: --nthreads 8
[2025-06-03 13:20:34] Threads: 8
[2025-06-03 13:20:34] Checking for CVMFS
[2025-06-03 13:20:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:20:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:20:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:20:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:20:35] 2.12.6.0 907015 32230 406708 146750 2 56 19898928 25181184 4521 16776704 1 126966425 99.465 164373197 23024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:20:35] CVMFS is ok
[2025-06-03 13:20:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:20:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:20:35] Further information can be found at the LHC@home message board.
[2025-06-03 13:20:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:20:35] Checking for apptainer binary...
[2025-06-03 13:20:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:20:35] Running /usr/bin/apptainer --version
[2025-06-03 13:20:35] apptainer version 1.4.1-1.el9
[2025-06-03 13:20:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:20:35] c-16-38.aglt2.org
[2025-06-03 13:20:35] apptainer works
[2025-06-03 13:20:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:20:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:20:35] Starting ATLAS job with PandaID=6677675639
[2025-06-03 13:20:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:34:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:34:10] 2025-06-03 20:14:13,083 | INFO     | extracted standard info from prmon json
[2025-06-03 17:34:10] 2025-06-03 20:14:13,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:34:10] 2025-06-03 20:14:13,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:34:10] 2025-06-03 20:14:13,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:34:10] 2025-06-03 20:14:13,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:34:10] 2025-06-03 20:14:13,153 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:34:10] 2025-06-03 20:14:13,154 | INFO     | sum of square deviations: 1496775923.6686432
[2025-06-03 17:34:10] 2025-06-03 20:14:13,155 | INFO     | sum of deviations: -15986110221.408298
[2025-06-03 17:34:10] 2025-06-03 20:14:13,155 | INFO     | mean x: 1748976395.0887575
[2025-06-03 17:34:10] 2025-06-03 20:14:13,155 | INFO     | mean y: 2117492.6272189347
[2025-06-03 17:34:10] 2025-06-03 20:14:13,156 | INFO     | -- intersect: 18681820302.117275
[2025-06-03 17:34:10] 2025-06-03 20:14:13,156 | INFO     | intersect: 18681820302.117275
[2025-06-03 17:34:10] 2025-06-03 20:14:13,226 | INFO     | chi2: 4.344441100422136
[2025-06-03 17:34:10] 2025-06-03 20:14:13,226 | INFO     | sum of square deviations: 1367808745.969508
[2025-06-03 17:34:10] 2025-06-03 20:14:13,227 | INFO     | sum of deviations: -4729668083.475616
[2025-06-03 17:34:10] 2025-06-03 20:14:13,227 | INFO     | mean x: 1748976242.5792682
[2025-06-03 17:34:10] 2025-06-03 20:14:13,227 | INFO     | mean y: 2130570.036585366
[2025-06-03 17:34:10] 2025-06-03 20:14:13,228 | INFO     | -- intersect: 6049816065.292718
[2025-06-03 17:34:10] 2025-06-03 20:14:13,228 | INFO     | intersect: 6049816065.292718
[2025-06-03 17:34:10] 2025-06-03 20:14:13,300 | INFO     | chi2: 3.7350133973407473
[2025-06-03 17:34:10] 2025-06-03 20:14:13,301 | INFO     | current chi2=3.7350133973407473 (change=14.027758438759191 %)
[2025-06-03 17:34:10] 2025-06-03 20:14:13,301 | INFO     | right removable region: 163
[2025-06-03 17:34:10] 2025-06-03 20:14:13,301 | INFO     | sum of square deviations: 1367820093.6280463
[2025-06-03 17:34:10] 2025-06-03 20:14:13,302 | INFO     | sum of deviations: -48341399258.585365
[2025-06-03 17:34:10] 2025-06-03 20:14:13,302 | INFO     | mean x: 1748976547.5914633
[2025-06-03 17:34:10] 2025-06-03 20:14:13,302 | INFO     | mean y: 2155574.43902439
[2025-06-03 17:34:10] 2025-06-03 20:14:13,302 | INFO     | -- intersect: 61814358783.68099
[2025-06-03 17:34:10] 2025-06-03 20:14:13,302 | INFO     | intersect: 61814358783.68099
[2025-06-03 17:34:10] 2025-06-03 20:14:13,303 | INFO     | chi2: 1.9667634952536466
[2025-06-03 17:34:10] 2025-06-03 20:14:13,303 | INFO     | current chi2=1.9667634952536466 (change=54.729194163489936 %)
[2025-06-03 17:34:10] 2025-06-03 20:14:13,303 | INFO     | sum of square deviations: 1246492313.584902
[2025-06-03 17:34:10] 2025-06-03 20:14:13,352 | INFO     | sum of deviations: -67707289250.886765
[2025-06-03 17:34:10] 2025-06-03 20:14:13,353 | INFO     | mean x: 1748976700.0943396
[2025-06-03 17:34:10] 2025-06-03 20:14:13,353 | INFO     | mean y: 2179850.1257861634
[2025-06-03 17:34:10] 2025-06-03 20:14:13,353 | INFO     | -- intersect: 95003544909.312
[2025-06-03 17:34:10] 2025-06-03 20:14:13,353 | INFO     | intersect: 95003544909.312
[2025-06-03 17:34:10] 2025-06-03 20:14:13,353 | INFO     | chi2: 1.0303247500792683
[2025-06-03 17:34:10] 2025-06-03 20:14:13,354 | INFO     | current chi2=1.0303247500792683 (change=47.61318518643794 %)
[2025-06-03 17:34:10] 2025-06-03 20:14:13,373 | INFO     | sum of square deviations: 1132560021.0389621
[2025-06-03 17:34:10] 2025-06-03 20:14:13,374 | INFO     | sum of deviations: -64204325693.96104
[2025-06-03 17:34:10] 2025-06-03 20:14:13,374 | INFO     | mean x: 1748976852.5974026
[2025-06-03 17:34:10] 2025-06-03 20:14:13,374 | INFO     | mean y: 2175079.5974025973
[2025-06-03 17:34:10] 2025-06-03 20:14:13,375 | INFO     | -- intersect: 99150897786.8944
[2025-06-03 17:34:10] 2025-06-03 20:14:13,375 | INFO     | intersect: 99150897786.8944
[2025-06-03 17:34:10] 2025-06-03 20:14:13,375 | INFO     | chi2: 1.0009208938248522
[2025-06-03 17:34:10] 2025-06-03 20:14:13,375 | INFO     | current chi2=1.0009208938248522 (change=2.8538435335222134 %)
[2025-06-03 17:34:10] 2025-06-03 20:14:13,375 | INFO     | left removable region: 30
[2025-06-03 17:34:10] 2025-06-03 20:14:13,376 | INFO     | sum of square deviations: 729540490.917293
[2025-06-03 17:34:10] 2025-06-03 20:14:13,377 | INFO     | sum of deviations: -30326121155.94737
[2025-06-03 17:34:10] 2025-06-03 20:14:13,377 | INFO     | mean x: 1748977127.0902255
[2025-06-03 17:34:10] 2025-06-03 20:14:13,389 | INFO     | mean y: 2155400.5789473685
[2025-06-03 17:34:10] 2025-06-03 20:14:13,389 | INFO     | -- intersect: 72705031958.43677
[2025-06-03 17:34:10] 2025-06-03 20:14:13,390 | INFO     | intersect: 72705031958.43677
[2025-06-03 17:34:10] 2025-06-03 20:14:13,390 | INFO     | chi2: 0.28104295678944846
[2025-06-03 17:34:10] 2025-06-03 20:14:13,390 | INFO     | -- intersect: 72705031958.43677
[2025-06-03 17:34:10] 2025-06-03 20:14:13,390 | INFO     | current memory leak: -41.57 B/s (using 133 data points, chi2=0.28)
[2025-06-03 17:34:10] 2025-06-03 20:14:13,391 | INFO     | ..............................
[2025-06-03 17:34:10] 2025-06-03 20:14:13,391 | INFO     | . Timing measurements:
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . get job = 0 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . initial setup = 2 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . payload setup = 6 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . stage-in = 0 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . payload execution = 10311 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . stage-out = 6 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,392 | INFO     | . log creation = 0 s
[2025-06-03 17:34:10] 2025-06-03 20:14:13,393 | INFO     | ..............................
[2025-06-03 17:34:10] 2025-06-03 20:14:14,000 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 20:14:14,000 | INFO     | job summary report
[2025-06-03 17:34:10] 2025-06-03 20:14:14,000 | INFO     | --------------------------------------------------
[2025-06-03 17:34:10] 2025-06-03 20:14:14,000 | INFO     | PanDA job id: 6677675639
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | task id: 45006595
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | errors: (none)
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | pilot state: finished 
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | transexitcode: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | exeerrorcode: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | exeerrordiag: 
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | exitcode: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:14,001 | INFO     | exitmsg: OK
[2025-06-03 17:34:10] 2025-06-03 20:14:14,002 | INFO     | cpuconsumptiontime: 46186 s
[2025-06-03 17:34:10] 2025-06-03 20:14:14,002 | INFO     | nevents: 400
[2025-06-03 17:34:10] 2025-06-03 20:14:14,002 | INFO     | neventsw: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | pid: 2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | pgrp: 2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | corecount: 8
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | event service: False
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 10323: 2433977, 10324: 2433976, 10331: 2442973, 10333: 2443157, 10393: 2443327}
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | --------------------------------------------------
[2025-06-03 17:34:10] 2025-06-03 20:14:14,005 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 20:14:14,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 17:34:10] 2025-06-03 20:14:14,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:34:10] 2025-06-03 20:14:14,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 20:14:14,531 | INFO     | job 6677675639 has completed (purged errors)
[2025-06-03 17:34:10] 2025-06-03 20:14:14,531 | INFO     | overall cleanup function is called
[2025-06-03 17:34:10] 2025-06-03 20:14:15,548 | INFO     | --- collectZombieJob: --- 10, [2290984]
[2025-06-03 17:34:10] 2025-06-03 20:14:15,548 | INFO     | zombie collector waiting for pid 2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:15,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:34:10] 2025-06-03 20:14:15,549 | INFO     | collected zombie processes
[2025-06-03 17:34:10] 2025-06-03 20:14:15,549 | INFO     | will attempt to kill all subprocesses of pid=2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:16,872 | INFO     | process IDs to be killed: [2290984] (in reverse order)
[2025-06-03 17:34:10] 2025-06-03 20:14:17,316 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:34:10] 2025-06-03 20:14:17,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:34:10] 2025-06-03 20:14:17,399 | INFO     | did not find any defunct processes belonging to 2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:17,522 | INFO     | did not find any defunct processes belonging to 2290984
[2025-06-03 17:34:10] 2025-06-03 20:14:17,522 | INFO     | ready for new job
[2025-06-03 17:34:10] 2025-06-03 20:14:17,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:34:10] 2025-06-03 20:14:17,524 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 20:14:17,524 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:34:10] 2025-06-03 20:14:17,524 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 20:14:17,525 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 20:14:17,531 | INFO     | architecture information:
[2025-06-03 17:34:10] 2025-06-03 20:14:17,535 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:34:10] 2025-06-03 20:14:17,655 | INFO     | cat /etc/os-release:
[2025-06-03 17:34:10] NAME="CentOS Linux"
[2025-06-03 17:34:10] VERSION="7 (Core)"
[2025-06-03 17:34:10] ID="centos"
[2025-06-03 17:34:10] ID_LIKE="rhel fedora"
[2025-06-03 17:34:10] VERSION_ID="7"
[2025-06-03 17:34:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:34:10] ANSI_COLOR="0;31"
[2025-06-03 17:34:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:34:10] HOME_URL="https://www.centos.org/"
[2025-06-03 17:34:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:34:10] 
[2025-06-03 17:34:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:34:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:34:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:34:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:34:10] 
[2025-06-03 17:34:10] 2025-06-03 20:14:17,656 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 20:14:18,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 17:34:10] 2025-06-03 20:14:18,325 | INFO     | sufficient remaining disk space (61932044288 B)
[2025-06-03 17:34:10] 2025-06-03 20:14:18,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:34:10] 2025-06-03 20:14:18,326 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:34:10] 2025-06-03 20:14:18,326 | INFO     | update_server=False
[2025-06-03 17:34:10] 2025-06-03 20:14:18,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:34:10] 2025-06-03 20:14:18,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 20:14:18,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 20:14:18,345 | INFO     | aborting loop
[2025-06-03 17:34:10] 2025-06-03 20:14:18,622 | INFO     | all job control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 20:14:19,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 20:14:19,327 | INFO     | all data control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 20:14:19,353 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:19,357 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:19,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 20:14:19,438 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:19,630 | INFO     | [job] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:19,797 | INFO     | all payload control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 20:14:19,801 | INFO     | PID=2284030 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 17:34:10] 2025-06-03 20:14:19,802 | INFO     | .. there are 35 such processes running
[2025-06-03 17:34:10] 2025-06-03 20:14:19,802 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:34:10] 2025-06-03 20:14:19,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:34:10] 2025-06-03 20:14:19,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:34:10] 2025-06-03 20:14:20,030 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,288 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,312 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,382 | INFO     | [data] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,393 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,405 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,461 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,534 | INFO     | [job] validate thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,855 | INFO     | [payload] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:20,864 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:23,443 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 20:14:24,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436269561664)>', '<ExcThread(monitor, started 140435414570752)>']
[2025-06-03 17:34:10] 2025-06-03 20:14:24,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:34:10] 2025-06-03 20:14:24,910 | INFO     | [monitor] control thread has ended
[2025-06-03 17:34:10] 2025-06-03 20:14:29,138 | INFO     | all workflow threads have been joined
[2025-06-03 17:34:10] 2025-06-03 20:14:29,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:34:10] 2025-06-03 20:14:29,139 | INFO     | traces error code: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:29,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:34:10] 2025-06-03 20:14:38,393 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:34:10] 2025-06-03 20:14:38,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:34:10] 2025-06-03 20:14:38,465 [wrapper] pilotpid: 2284030
[2025-06-03 17:34:10] 2025-06-03 20:14:38,498 [wrapper] Pilot exit status: 0
[2025-06-03 17:34:10] 2025-06-03 20:14:38,679 [wrapper] pandaids: 6677675639
[2025-06-03 17:34:10] 2025-06-03 20:14:39,649 [wrapper] cleanup supervisor_pilot  465239 2284031
[2025-06-03 17:34:10] 2025-06-03 20:14:39,819 [wrapper] Test setup, not cleaning
[2025-06-03 17:34:10] 2025-06-03 20:14:39,929 [wrapper] apfmon messages muted
[2025-06-03 17:34:10] 2025-06-03 20:14:40,008 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:34:10] 2025-06-03 20:14:40,039 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:34:10]  *** Error codes and diagnostics ***
[2025-06-03 17:34:10]     "exeErrorCode": 0,
[2025-06-03 17:34:10]     "exeErrorDiag": "",
[2025-06-03 17:34:10]     "pilotErrorCode": 0,
[2025-06-03 17:34:10]     "pilotErrorDiag": "",
[2025-06-03 17:34:10]  *** Listing of results directory ***
[2025-06-03 17:34:10] total 391556
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:47 pilot3.tar.gz
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:51 queuedata.json
[2025-06-03 17:34:10] -rwx------. 1 boincer umatlas     37140 Jun  3 10:51 runpilot2-wrapper.sh
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:34:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:20 run_atlas
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:20 job.xml
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas 216096826 Jun  3 13:20 EVNT.45006593._001444.pool.root.1
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:34:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:20 shared
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:20 input.tar.gz
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:20 boinc_lockfile
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:20 pandaJob.out
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas    985078 Jun  3 13:20 agis_schedconf.cvmfs.json
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:34:10] drwx------. 4 boincer umatlas      4096 Jun  3 13:20 pilot3
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas 178575024 Jun  3 16:11 HITS.45006595._035939.pool.root.1
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas       529 Jun  3 16:11 boinc_task_state.xml
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas      1039 Jun  3 16:12 memory_monitor_summary.json
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas    357286 Jun  3 16:13 log.45006595._035939.job.log.tgz.1
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas        95 Jun  3 16:13 pilot_heartbeat.json
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas      7721 Jun  3 16:14 heartbeat.json
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas      4748 Jun  3 16:14 pilotlog.txt
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas    862865 Jun  3 16:14 log.45006595._035939.job.log.1
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas       357 Jun  3 16:14 output.list
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas       620 Jun  3 16:14 runtime_log
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas   1239040 Jun  3 16:14 result.tar.gz
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas       654 Jun  3 16:14 tZqMDmHAig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1dkKDmqzpTPn.diag
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas      8655 Jun  3 16:14 runtime_log.err
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas      6612 Jun  3 17:30 init_data.xml
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:34 wrapper_checkpoint.txt
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:34 boinc_mmap_file
[2025-06-03 17:34:10] -rw-r--r--. 1 boincer umatlas     20960 Jun  3 17:34 stderr.txt
[2025-06-03 17:34:10] HITS file was successfully produced:
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas 178575024 Jun  3 16:11 shared/HITS.pool.root.1
[2025-06-03 17:34:10]  *** Contents of shared directory: ***
[2025-06-03 17:34:10] total 387164
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas 216096826 Jun  3 13:20 ATLAS.root_0
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:34:10] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:20 input.tar.gz
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas 178575024 Jun  3 16:11 HITS.pool.root.1
[2025-06-03 17:34:10] -rw-------. 1 boincer umatlas   1239040 Jun  3 16:14 result.tar.gz
17:34:12 (2280396): run_atlas exited; CPU time 46653.395864
17:34:12 (2280396): called boinc_finish(0)

</stderr_txt>
]]>

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