Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:31 (2961789): wrapper (7.7.26015): starting
13:30:31 (2961789): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:30:31] Arguments: --nthreads 8
[2025-06-03 13:30:31] Threads: 8
[2025-06-03 13:30:31] Checking for CVMFS
[2025-06-03 13:30:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:30:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:30:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:30:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:30:31] 2.12.6.0 4122838 22150 426724 146750 0 197 22556992 32935937 5069 16776704 0 61825023 99.624 74454731 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:30:31] CVMFS is ok
[2025-06-03 13:30:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:30:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:30:31] Further information can be found at the LHC@home message board.
[2025-06-03 13:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:30:31] Checking for apptainer binary...
[2025-06-03 13:30:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:30:31] Running /usr/bin/apptainer --version
[2025-06-03 13:30:31] apptainer version 1.4.1-1.el9
[2025-06-03 13:30:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:30:31] c6-6-39-3.aglt2.org
[2025-06-03 13:30:31] apptainer works
[2025-06-03 13:30:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:30:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:30:31] Starting ATLAS job with PandaID=6677676426
[2025-06-03 13:30:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:37:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:37:29]  guid=74953222-8027-4b49-9d51-293daf619d70
[2025-06-03 14:37:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 14:37:29]  is_altstaged=None
[2025-06-03 14:37:29]  is_tar=False
[2025-06-03 14:37:29]  lfn=log.45006595._036550.job.log.tgz.1
[2025-06-03 14:37:29]  mtime=0
[2025-06-03 14:37:29]  protocol_id=None
[2025-06-03 14:37:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:37:29]  replicas=None
[2025-06-03 14:37:29]  scope=mc23_13p6TeV
[2025-06-03 14:37:29]  status=None
[2025-06-03 14:37:29]  status_code=0
[2025-06-03 14:37:29]  storage_token=
[2025-06-03 14:37:29]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677676426/log.45006595._036550.job.log.tgz.1
[2025-06-03 14:37:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/fc/log.45006595._036550.job.log.tgz.1
[2025-06-03 14:37:29]  workdir=None
[2025-06-03 14:37:29] ]
[2025-06-03 14:37:29] 2025-06-03 18:37:11,607 | INFO     | transferring file log.45006595._036550.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677676426/log.45006595._036550.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:37:29] 2025-06-03 18:37:11,607 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677676426/log.45006595._036550.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._036550.job
[2025-06-03 14:37:29] 2025-06-03 18:37:11,625 | INFO     | adding to output.list: log.45006595._036550.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/fc/log.45006595._036550.job.log.tg
[2025-06-03 14:37:29] 2025-06-03 18:37:11,626 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:37:29] 2025-06-03 18:37:11,626 | INFO     | summary of transferred files:
[2025-06-03 14:37:29] 2025-06-03 18:37:11,626 | INFO     |  -- lfn=log.45006595._036550.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:37:29] 2025-06-03 18:37:11,626 | INFO     | stage-out finished correctly
[2025-06-03 14:37:29] 2025-06-03 18:37:12,437 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:37:29] 2025-06-03 18:37:12,521 | INFO     | job 6677676426 has state=finished
[2025-06-03 14:37:29] 2025-06-03 18:37:12,521 | INFO     | preparing for final server update for job 6677676426 in state='finished'
[2025-06-03 14:37:29] 2025-06-03 18:37:12,522 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:37:29] 2025-06-03 18:37:12,522 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:37:29] 2025-06-03 18:37:12,522 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:37:29] 2025-06-03 18:37:12,522 | INFO     | job 6677676426 has finished - writing final server update
[2025-06-03 14:37:29] 2025-06-03 18:37:12,522 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:37:29] 2025-06-03 18:37:12,537 | INFO     | executing command: lscpu
[2025-06-03 14:37:29] 2025-06-03 18:37:12,612 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:37:29] 2025-06-03 18:37:13,254 | INFO     | monitor loop #299: job 0:6677676426 is in state 'finished'
[2025-06-03 14:37:29] 2025-06-03 18:37:13,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:37:29] 2025-06-03 18:37:15,757 | INFO     | monitor loop #300: job 0:6677676426 is in state 'finished'
[2025-06-03 14:37:29] 2025-06-03 18:37:15,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,189 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:37:29] 2025-06-03 18:37:16,189 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677676426/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,190 | INFO     | extracted standard info from prmon json
[2025-06-03 14:37:29] 2025-06-03 18:37:16,190 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:37:29] 2025-06-03 18:37:16,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:37:29] 2025-06-03 18:37:16,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:37:29] 2025-06-03 18:37:16,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:37:29] 2025-06-03 18:37:16,192 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:37:29] 2025-06-03 18:37:16,192 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | sum of deviations: 5094273297.0
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | mean x: 1748973908.5
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | mean y: 2131233.7586206896
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | -- intersect: -147307887935.7002
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | intersect: -147307887935.7002
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | chi2: 0.822465198502246
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | -- intersect: -147307887935.7002
[2025-06-03 14:37:29] 2025-06-03 18:37:16,193 | INFO     | current memory leak: 84.23 B/s (using 58 data points, chi2=0.82)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | ..............................
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . Timing measurements:
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . get job = 0 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . initial setup = 2 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . payload setup = 5 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . stage-in = 0 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . payload execution = 3966 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . stage-out = 0 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | . log creation = 0 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,194 | INFO     | ..............................
[2025-06-03 14:37:29] 2025-06-03 18:37:16,281 | INFO     | 
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | job summary report
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | --------------------------------------------------
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | PanDA job id: 6677676426
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | task id: 45006595
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | errors: (none)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | pilot state: finished 
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | transexitcode: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | exeerrorcode: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | exeerrordiag: 
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | exitcode: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | exitmsg: OK
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | cpuconsumptiontime: 26960 s
[2025-06-03 14:37:29] 2025-06-03 18:37:16,282 | INFO     | nevents: 400
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | neventsw: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | pid: 2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | pgrp: 2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | corecount: 8
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | event service: False
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 3975: 2431213, 3976: 2431212, 3977: 2440393, 3981: 2440507}
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | --------------------------------------------------
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | 
[2025-06-03 14:37:29] 2025-06-03 18:37:16,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 14:37:29] 2025-06-03 18:37:16,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | job 6677676426 has completed (purged errors)
[2025-06-03 14:37:29] 2025-06-03 18:37:16,302 | INFO     | overall cleanup function is called
[2025-06-03 14:37:29] 2025-06-03 18:37:17,310 | INFO     | --- collectZombieJob: --- 10, [2971873]
[2025-06-03 14:37:29] 2025-06-03 18:37:17,311 | INFO     | zombie collector waiting for pid 2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:17,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:37:29] 2025-06-03 18:37:17,311 | INFO     | collected zombie processes
[2025-06-03 14:37:29] 2025-06-03 18:37:17,311 | INFO     | will attempt to kill all subprocesses of pid=2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:17,550 | INFO     | process IDs to be killed: [2971873] (in reverse order)
[2025-06-03 14:37:29] 2025-06-03 18:37:17,623 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:37:29] 2025-06-03 18:37:17,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:37:29] 2025-06-03 18:37:17,632 | INFO     | did not find any defunct processes belonging to 2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:17,640 | INFO     | did not find any defunct processes belonging to 2971873
[2025-06-03 14:37:29] 2025-06-03 18:37:17,640 | INFO     | ready for new job
[2025-06-03 14:37:29] 2025-06-03 18:37:17,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:37:29] 2025-06-03 18:37:17,641 | INFO     | **************************************
[2025-06-03 14:37:29] 2025-06-03 18:37:17,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:37:29] 2025-06-03 18:37:17,642 | INFO     | **************************************
[2025-06-03 14:37:29] 2025-06-03 18:37:17,642 | INFO     | 
[2025-06-03 14:37:29] 2025-06-03 18:37:17,656 | INFO     | architecture information:
[2025-06-03 14:37:29] 2025-06-03 18:37:17,656 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:37:29] 2025-06-03 18:37:17,669 | INFO     | cat /etc/os-release:
[2025-06-03 14:37:29] NAME="CentOS Linux"
[2025-06-03 14:37:29] VERSION="7 (Core)"
[2025-06-03 14:37:29] ID="centos"
[2025-06-03 14:37:29] ID_LIKE="rhel fedora"
[2025-06-03 14:37:29] VERSION_ID="7"
[2025-06-03 14:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:37:29] ANSI_COLOR="0;31"
[2025-06-03 14:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:37:29] HOME_URL="https://www.centos.org/"
[2025-06-03 14:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:37:29] 
[2025-06-03 14:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:37:29] 
[2025-06-03 14:37:29] 2025-06-03 18:37:17,670 | INFO     | **************************************
[2025-06-03 14:37:29] 2025-06-03 18:37:18,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 14:37:29] 2025-06-03 18:37:18,187 | INFO     | sufficient remaining disk space (73201090560 B)
[2025-06-03 14:37:29] 2025-06-03 18:37:18,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:37:29] 2025-06-03 18:37:18,188 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:37:29] 2025-06-03 18:37:18,188 | INFO     | update_server=False
[2025-06-03 14:37:29] 2025-06-03 18:37:18,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:37:29] 2025-06-03 18:37:18,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:37:29] 2025-06-03 18:37:18,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:37:29] 2025-06-03 18:37:18,189 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:37:29] 2025-06-03 18:37:18,190 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:37:29] 2025-06-03 18:37:18,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:37:29] 2025-06-03 18:37:18,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:37:29] 2025-06-03 18:37:18,260 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:37:29] 2025-06-03 18:37:18,261 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:37:29] 2025-06-03 18:37:18,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:37:29] 2025-06-03 18:37:18,261 | INFO     | will abort loop
[2025-06-03 14:37:29] 2025-06-03 18:37:18,433 | INFO     | all payload control threads have been joined
[2025-06-03 14:37:29] 2025-06-03 18:37:18,523 | INFO     | all data control threads have been joined
[2025-06-03 14:37:29] 2025-06-03 18:37:18,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:37:29] 2025-06-03 18:37:19,193 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,194 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,266 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,381 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,439 | INFO     | [payload] control thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,528 | INFO     | [data] control thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:19,726 | INFO     | all job control threads have been joined
[2025-06-03 14:37:29] 2025-06-03 18:37:19,891 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,009 | INFO     | [job] validate thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,018 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,195 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,457 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,478 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,518 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:20,731 | INFO     | [job] control thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:22,531 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:37:29] 2025-06-03 18:37:23,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719602304832)>', '<ExcThread(monitor, started 140719251494656)>']
[2025-06-03 14:37:29] 2025-06-03 18:37:24,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:37:29] 2025-06-03 18:37:24,221 | INFO     | [monitor] control thread has ended
[2025-06-03 14:37:29] 2025-06-03 18:37:28,838 | INFO     | all workflow threads have been joined
[2025-06-03 14:37:29] 2025-06-03 18:37:28,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:37:29] 2025-06-03 18:37:28,838 | INFO     | traces error code: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:28,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:37:29] 2025-06-03 18:37:28,956 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:37:29] 2025-06-03 18:37:28,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:37:29] 2025-06-03 18:37:28,961 [wrapper] pilotpid: 2965384
[2025-06-03 14:37:29] 2025-06-03 18:37:28,963 [wrapper] Pilot exit status: 0
[2025-06-03 14:37:29] 2025-06-03 18:37:28,972 [wrapper] pandaids: 6677676426
[2025-06-03 14:37:29] 2025-06-03 18:37:29,024 [wrapper] cleanup supervisor_pilot 3159727 2965385
[2025-06-03 14:37:29] 2025-06-03 18:37:29,027 [wrapper] Test setup, not cleaning
[2025-06-03 14:37:29] 2025-06-03 18:37:29,030 [wrapper] apfmon messages muted
[2025-06-03 14:37:29] 2025-06-03 18:37:29,033 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:37:29] 2025-06-03 18:37:29,035 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:37:29]  *** Error codes and diagnostics ***
[2025-06-03 14:37:29]     "exeErrorCode": 0,
[2025-06-03 14:37:29]     "exeErrorDiag": "",
[2025-06-03 14:37:29]     "pilotErrorCode": 0,
[2025-06-03 14:37:29]     "pilotErrorDiag": "",
[2025-06-03 14:37:29]  *** Listing of results directory ***
[2025-06-03 14:37:29] total 395144
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:06 queuedata.json
[2025-06-03 14:37:29] -rwx------. 1 boincer umatlas     37140 Jun  3 11:07 runpilot2-wrapper.sh
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:37:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:30 run_atlas
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:30 job.xml
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas 217312045 Jun  3 13:30 EVNT.45006593._001468.pool.root.1
[2025-06-03 14:37:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:30 shared
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 13:30 input.tar.gz
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:30 start_atlas.sh
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:30 boinc_lockfile
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:30 pandaJob.out
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas    985078 Jun  3 13:30 agis_schedconf.cvmfs.json
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:30 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:37:29] drwx------. 4 boincer umatlas      4096 Jun  3 13:30 pilot3
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas      6840 Jun  3 14:29 init_data.xml
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas 182048297 Jun  3 14:36 HITS.45006595._036550.pool.root.1
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:36 boinc_task_state.xml
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas        95 Jun  3 14:36 pilot_heartbeat.json
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas      1035 Jun  3 14:37 memory_monitor_summary.json
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas    313049 Jun  3 14:37 log.45006595._036550.job.log.tgz.1
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas      7715 Jun  3 14:37 heartbeat.json
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:37 boinc_mmap_file
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:37 wrapper_checkpoint.txt
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas      4662 Jun  3 14:37 pilotlog.txt
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas    404082 Jun  3 14:37 log.45006595._036550.job.log.1
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas       357 Jun  3 14:37 output.list
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:37 runtime_log
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas    737280 Jun  3 14:37 result.tar.gz
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 14:37 runtime_log.err
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas       652 Jun  3 14:37 hQiNDm6Pig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmc1YKDmoB8yXm.diag
[2025-06-03 14:37:29] -rw-r--r--. 1 boincer umatlas     21303 Jun  3 14:37 stderr.txt
[2025-06-03 14:37:29] HITS file was successfully produced:
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas 182048297 Jun  3 14:36 shared/HITS.pool.root.1
[2025-06-03 14:37:29]  *** Contents of shared directory: ***
[2025-06-03 14:37:29] total 391244
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas 217312045 Jun  3 13:30 ATLAS.root_0
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 13:30 input.tar.gz
[2025-06-03 14:37:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:30 start_atlas.sh
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas 182048297 Jun  3 14:36 HITS.pool.root.1
[2025-06-03 14:37:29] -rw-------. 1 boincer umatlas    737280 Jun  3 14:37 result.tar.gz
14:37:30 (2961789): run_atlas exited; CPU time 27043.290098
14:37:30 (2961789): called boinc_finish(0)

</stderr_txt>
]]>

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