Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:10:26 (18476): wrapper (7.7.26015): starting
06:10:26 (18476): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:10:26] Arguments: --nthreads 8
[2025-06-04 06:10:26] Threads: 8
[2025-06-04 06:10:26] Checking for CVMFS
[2025-06-04 06:10:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:10:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:10:28] 2.11.2.0 16729 32822 88800 146767 2 114 17170227 25165825 4008 130560 0 16976803 99.824 19612712 2632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:10:28] CVMFS is ok
[2025-06-04 06:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:10:28] Checking for apptainer binary...
[2025-06-04 06:10:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:10:28] Running /usr/bin/apptainer --version
[2025-06-04 06:10:28] apptainer version 1.3.2-1.el7
[2025-06-04 06:10:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:10:29] cg-vwn332.simple-grid.lan
[2025-06-04 06:10:29] apptainer works
[2025-06-04 06:10:29] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:10:29] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:10:29] Starting ATLAS job with PandaID=6677675467
[2025-06-04 06:10:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:46:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:46:58] 2025-06-04 07:49:03,525 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6677675467/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,526 | INFO     | extracted standard info from prmon json
[2025-06-04 12:46:58] 2025-06-04 07:49:03,526 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:46:58] 2025-06-04 07:49:03,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:46:58] 2025-06-04 07:49:03,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:46:58] 2025-06-04 07:49:03,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:46:58] 2025-06-04 07:49:03,531 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:46:58] 2025-06-04 07:49:03,532 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | sum of deviations: -18111991839.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | mean x: 1749016772.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | mean y: 2494621.61971831
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | -- intersect: 10574381957.981432
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | intersect: 10574381957.981432
[2025-06-04 12:46:58] 2025-06-04 07:49:03,534 | INFO     | chi2: 2.4865391848489455
[2025-06-04 12:46:58] 2025-06-04 07:49:03,535 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,537 | INFO     | sum of deviations: -3946509466.5000014
[2025-06-04 12:46:58] 2025-06-04 07:49:03,537 | INFO     | mean x: 1749016619.5
[2025-06-04 12:46:58] 2025-06-04 07:49:03,537 | INFO     | mean y: 2504906.4759615385
[2025-06-04 12:46:58] 2025-06-04 07:49:03,537 | INFO     | -- intersect: 2476214393.3904715
[2025-06-04 12:46:58] 2025-06-04 07:49:03,537 | INFO     | intersect: 2476214393.3904715
[2025-06-04 12:46:58] 2025-06-04 07:49:03,538 | INFO     | chi2: 1.7247435321916307
[2025-06-04 12:46:58] 2025-06-04 07:49:03,538 | INFO     | current chi2=1.7247435321916307 (change=30.636784543718864 %)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,538 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | sum of deviations: -3903463383.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | mean x: 1749016467.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | mean y: 2504939.906403941
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | -- intersect: 2634517814.8983274
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | intersect: 2634517814.8983274
[2025-06-04 12:46:58] 2025-06-04 07:49:03,540 | INFO     | chi2: 1.7242121557335033
[2025-06-04 12:46:58] 2025-06-04 07:49:03,541 | INFO     | current chi2=1.7242121557335033 (change=0.030809012946532252 %)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,541 | INFO     | right removable region: 202
[2025-06-04 12:46:58] 2025-06-04 07:49:03,541 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | sum of deviations: -51899683280.000015
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | mean x: 1749016924.5
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | mean y: 2519378.326923077
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | -- intersect: 32533737756.38904
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | intersect: 32533737756.38904
[2025-06-04 12:46:58] 2025-06-04 07:49:03,543 | INFO     | chi2: 0.98009092498503
[2025-06-04 12:46:58] 2025-06-04 07:49:03,544 | INFO     | current chi2=0.98009092498503 (change=60.58413513219703 %)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,544 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,545 | INFO     | sum of deviations: -49738034941.99999
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | mean x: 1749017077.0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | mean y: 2517658.2413793104
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | -- intersect: 33539707880.601543
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | intersect: 33539707880.601543
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | chi2: 0.9656259758129786
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | current chi2=0.9656259758129786 (change=1.4758782887692152 %)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,546 | INFO     | left removable region: 20
[2025-06-04 12:46:58] 2025-06-04 07:49:03,547 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 12:46:58] 2025-06-04 07:49:03,548 | INFO     | sum of deviations: -22062681849.000004
[2025-06-04 12:46:58] 2025-06-04 07:49:03,548 | INFO     | mean x: 1749017046.5
[2025-06-04 12:46:58] 2025-06-04 07:49:03,548 | INFO     | mean y: 2518070.813186813
[2025-06-04 12:46:58] 2025-06-04 07:49:03,548 | INFO     | -- intersect: 20645520709.771782
[2025-06-04 12:46:58] 2025-06-04 07:49:03,549 | INFO     | intersect: 20645520709.771782
[2025-06-04 12:46:58] 2025-06-04 07:49:03,549 | INFO     | chi2: 0.1461935810728135
[2025-06-04 12:46:58] 2025-06-04 07:49:03,549 | INFO     | -- intersect: 20645520709.771782
[2025-06-04 12:46:58] 2025-06-04 07:49:03,549 | INFO     | current memory leak: -11.80 B/s (using 182 data points, chi2=0.15)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | ..............................
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . Timing measurements:
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . get job = 0 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . initial setup = 2 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . payload setup = 15 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . stage-in = 0 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . payload execution = 12962 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,550 | INFO     | . stage-out = 6 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,551 | INFO     | . log creation = 1 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,551 | INFO     | ..............................
[2025-06-04 12:46:58] 2025-06-04 07:49:03,681 | INFO     | 
[2025-06-04 12:46:58] 2025-06-04 07:49:03,681 | INFO     | job summary report
[2025-06-04 12:46:58] 2025-06-04 07:49:03,681 | INFO     | --------------------------------------------------
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | PanDA job id: 6677675467
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | task id: 45006595
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | errors: (none)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | pilot state: finished 
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | transexitcode: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | exeerrorcode: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | exeerrordiag: 
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | exitcode: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | exitmsg: OK
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | cpuconsumptiontime: 49599 s
[2025-06-04 12:46:58] 2025-06-04 07:49:03,682 | INFO     | nevents: 400
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | neventsw: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | pid: 30677
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | pgrp: 30677
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | corecount: 8
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | event service: False
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | sizes: {0: 2405185, 1: 2405185, 10: 2405419, 11: 2405447, 12981: 2434680, 12982: 2434679, 12988: 2443806, 12991: 2443862, 13074: 2444032}
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | --------------------------------------------------
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | 
[2025-06-04 12:46:58] 2025-06-04 07:49:03,683 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-04 12:46:58] 2025-06-04 07:49:03,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:46:58] 2025-06-04 07:49:03,888 | INFO     | job 6677675467 has completed (purged errors)
[2025-06-04 12:46:58] 2025-06-04 07:49:03,888 | INFO     | overall cleanup function is called
[2025-06-04 12:46:58] 2025-06-04 07:49:04,897 | INFO     | --- collectZombieJob: --- 10, [30677]
[2025-06-04 12:46:58] 2025-06-04 07:49:04,897 | INFO     | zombie collector waiting for pid 30677
[2025-06-04 12:46:58] 2025-06-04 07:49:04,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:46:58] 2025-06-04 07:49:04,898 | INFO     | collected zombie processes
[2025-06-04 12:46:58] 2025-06-04 07:49:04,898 | INFO     | will attempt to kill all subprocesses of pid=30677
[2025-06-04 12:46:58] 2025-06-04 07:49:05,007 | INFO     | process IDs to be killed: [30677] (in reverse order)
[2025-06-04 12:46:58] 2025-06-04 07:49:05,438 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:46:58] 2025-06-04 07:49:05,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:46:58] 2025-06-04 07:49:05,444 | INFO     | did not find any defunct processes belonging to 30677
[2025-06-04 12:46:58] 2025-06-04 07:49:05,447 | INFO     | did not find any defunct processes belonging to 30677
[2025-06-04 12:46:58] 2025-06-04 07:49:05,447 | INFO     | ready for new job
[2025-06-04 12:46:58] 2025-06-04 07:49:05,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:46:58] 2025-06-04 07:49:05,450 | INFO     | **************************************
[2025-06-04 12:46:58] 2025-06-04 07:49:05,450 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:46:58] 2025-06-04 07:49:05,450 | INFO     | **************************************
[2025-06-04 12:46:58] 2025-06-04 07:49:05,450 | INFO     | 
[2025-06-04 12:46:58] 2025-06-04 07:49:05,451 | INFO     | pilot is running in a VM
[2025-06-04 12:46:58] 2025-06-04 07:49:05,451 | INFO     | architecture information:
[2025-06-04 12:46:58] 2025-06-04 07:49:05,467 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:46:58] 2025-06-04 07:49:05,611 | INFO     | cat /etc/os-release:
[2025-06-04 12:46:58] NAME="CentOS Linux"
[2025-06-04 12:46:58] VERSION="7 (Core)"
[2025-06-04 12:46:58] ID="centos"
[2025-06-04 12:46:58] ID_LIKE="rhel fedora"
[2025-06-04 12:46:58] VERSION_ID="7"
[2025-06-04 12:46:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:46:58] ANSI_COLOR="0;31"
[2025-06-04 12:46:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:46:58] HOME_URL="https://www.centos.org/"
[2025-06-04 12:46:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:46:58] 
[2025-06-04 12:46:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:46:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:46:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:46:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:46:58] 
[2025-06-04 12:46:58] 2025-06-04 07:49:05,612 | INFO     | **************************************
[2025-06-04 12:46:58] 2025-06-04 07:49:06,115 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-04 12:46:58] 2025-06-04 07:49:06,178 | INFO     | sufficient remaining disk space (496706256896 B)
[2025-06-04 12:46:58] 2025-06-04 07:49:06,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:46:58] 2025-06-04 07:49:06,179 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:46:58] 2025-06-04 07:49:06,179 | INFO     | update_server=False
[2025-06-04 12:46:58] 2025-06-04 07:49:06,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:46:58] 2025-06-04 07:49:06,405 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:46:58] 2025-06-04 07:49:06,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:46:58] 2025-06-04 07:49:06,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:46:58] 2025-06-04 07:49:06,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:46:58] 2025-06-04 07:49:06,655 | INFO     | all payload control threads have been joined
[2025-06-04 12:46:58] 2025-06-04 07:49:07,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:46:58] 2025-06-04 07:49:07,010 | INFO     | aborting loop
[2025-06-04 12:46:58] 2025-06-04 07:49:07,042 | INFO     | all data control threads have been joined
[2025-06-04 12:46:58] 2025-06-04 07:49:07,185 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,360 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,446 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,580 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,584 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,661 | INFO     | [payload] control thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,778 | INFO     | [job] validate thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,790 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:07,814 | INFO     | all job control threads have been joined
[2025-06-04 12:46:58] 2025-06-04 07:49:08,018 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:08,048 | INFO     | [data] control thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:08,500 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:08,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:46:58] 2025-06-04 07:49:08,639 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:08,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:46:58] 2025-06-04 07:49:08,820 | INFO     | [job] control thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:09,701 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:12,597 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:46:58] 2025-06-04 07:49:13,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451709060928)>', '<ExcThread(monitor, started 140451109652224)>']
[2025-06-04 12:46:58] 2025-06-04 07:49:14,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:46:58] 2025-06-04 07:49:14,456 | INFO     | [monitor] control thread has ended
[2025-06-04 12:46:58] 2025-06-04 07:49:18,983 | INFO     | all workflow threads have been joined
[2025-06-04 12:46:58] 2025-06-04 07:49:18,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:46:58] 2025-06-04 07:49:18,984 | INFO     | traces error code: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:18,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:46:58] 2025-06-04 07:49:19,392 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:46:58] 2025-06-04 07:49:19,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:46:58] 2025-06-04 07:49:19,562 [wrapper] pilotpid: 22142
[2025-06-04 12:46:58] 2025-06-04 07:49:19,652 [wrapper] Pilot exit status: 0
[2025-06-04 12:46:58] 2025-06-04 07:49:20,212 [wrapper] pandaids: 6677675467
[2025-06-04 12:46:58] 2025-06-04 07:49:21,132 [wrapper] cleanup supervisor_pilot 13828 22143
[2025-06-04 12:46:58] 2025-06-04 07:49:21,179 [wrapper] Test setup, not cleaning
[2025-06-04 12:46:58] 2025-06-04 07:49:21,273 [wrapper] apfmon messages muted
[2025-06-04 12:46:58] 2025-06-04 07:49:21,365 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:46:58] 2025-06-04 07:49:21,421 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:46:58]  *** Error codes and diagnostics ***
[2025-06-04 12:46:58]     "exeErrorCode": 0,
[2025-06-04 12:46:58]     "exeErrorDiag": "",
[2025-06-04 12:46:58]     "pilotErrorCode": 0,
[2025-06-04 12:46:58]     "pilotErrorDiag": "",
[2025-06-04 12:46:58]  *** Listing of results directory ***
[2025-06-04 12:46:58] total 389172
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:41 queuedata.json
[2025-06-04 12:46:58] -rwx------. 1 boinc boinc     37140 Jun  3 16:43 runpilot2-wrapper.sh
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:46:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:10 run_atlas
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:10 job.xml
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc 213424764 Jun  4 06:10 EVNT.45006593._001439.pool.root.1
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:10 start_atlas.sh
[2025-06-04 12:46:58] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:10 shared
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc    508887 Jun  4 06:10 input.tar.gz
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc      6391 Jun  4 06:10 init_data.xml
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:10 boinc_lockfile
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc      2525 Jun  4 06:10 pandaJob.out
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc    986077 Jun  4 06:10 agis_schedconf.cvmfs.json
[2025-06-04 12:46:58] drwx------. 4 boinc boinc      4096 Jun  4 06:10 pilot3
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc 178211163 Jun  4 09:46 HITS.45006595._035824.pool.root.1
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc       531 Jun  4 09:46 boinc_task_state.xml
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc      1018 Jun  4 09:47 memory_monitor_summary.json
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc   1603667 Jun  4 09:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc    390574 Jun  4 09:47 log.45006595._035824.job.log.tgz.1
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc        95 Jun  4 09:49 pilot_heartbeat.json
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc      7690 Jun  4 09:49 heartbeat.json
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc      4417 Jun  4 09:49 pilotlog.txt
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc   1138393 Jun  4 09:49 log.45006595._035824.job.log.1
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc       357 Jun  4 09:49 output.list
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:49 runtime_log
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc   1546240 Jun  4 09:49 result.tar.gz
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc      8673 Jun  4 09:49 runtime_log.err
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc       657 Jun  4 09:49 B7rMDmH2hg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgbkKDmBATYpn.diag
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:46 boinc_mmap_file
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:46 wrapper_checkpoint.txt
[2025-06-04 12:46:58] -rw-r--r--. 1 boinc boinc     20512 Jun  4 12:46 stderr.txt
[2025-06-04 12:46:58] HITS file was successfully produced:
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc 178211163 Jun  4 09:46 shared/HITS.pool.root.1
[2025-06-04 12:46:58]  *** Contents of shared directory: ***
[2025-06-04 12:46:58] total 384488
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc 213424764 Jun  4 06:10 ATLAS.root_0
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:10 start_atlas.sh
[2025-06-04 12:46:58] -rw-r--r--. 2 boinc boinc    508887 Jun  4 06:10 input.tar.gz
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc 178211163 Jun  4 09:46 HITS.pool.root.1
[2025-06-04 12:46:58] -rw-------. 1 boinc boinc   1546240 Jun  4 09:49 result.tar.gz
12:47:00 (18476): run_atlas exited; CPU time 49761.797661
12:47:00 (18476): called boinc_finish(0)

</stderr_txt>
]]>

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