Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:14 (18541): wrapper (7.7.26015): starting
04:42:14 (18541): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:42:14] Arguments: --nthreads 8
[2025-06-04 04:42:14] Threads: 8
[2025-06-04 04:42:14] Checking for CVMFS
[2025-06-04 04:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:42:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:42:15] 2.11.2.0 13500 32734 89108 146763 2 155 18294305 25165824 4134 130560 0 16429415 99.834 18960469 2577 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 04:42:15] CVMFS is ok
[2025-06-04 04:42:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:42:15] Checking for apptainer binary...
[2025-06-04 04:42:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:42:15] Running /usr/bin/apptainer --version
[2025-06-04 04:42:16] apptainer version 1.3.2-1.el7
[2025-06-04 04:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:42:17] cg-vwn363.simple-grid.lan
[2025-06-04 04:42:17] apptainer works
[2025-06-04 04:42:17] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:42:17] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:42:17] Starting ATLAS job with PandaID=6677675347
[2025-06-04 04:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:17:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:17:55] 2025-06-04 06:21:54,188 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6677675347/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,188 | INFO     | extracted standard info from prmon json
[2025-06-04 12:17:55] 2025-06-04 06:21:54,188 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:17:55] 2025-06-04 06:21:54,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:17:55] 2025-06-04 06:21:54,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:17:55] 2025-06-04 06:21:54,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:17:55] 2025-06-04 06:21:54,194 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:17:55] 2025-06-04 06:21:54,195 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,197 | INFO     | sum of deviations: 31163897343.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,197 | INFO     | mean x: 1749011512.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,197 | INFO     | mean y: 2447726.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,197 | INFO     | -- intersect: -18187722840.428947
[2025-06-04 12:17:55] 2025-06-04 06:21:54,197 | INFO     | intersect: -18187722840.428947
[2025-06-04 12:17:55] 2025-06-04 06:21:54,198 | INFO     | chi2: 2.5157198896397035
[2025-06-04 12:17:55] 2025-06-04 06:21:54,198 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,200 | INFO     | sum of deviations: 44241714213.50001
[2025-06-04 12:17:55] 2025-06-04 06:21:54,200 | INFO     | mean x: 1749011359.5
[2025-06-04 12:17:55] 2025-06-04 06:21:54,200 | INFO     | mean y: 2457204.985576923
[2025-06-04 12:17:55] 2025-06-04 06:21:54,201 | INFO     | -- intersect: -27728584608.675873
[2025-06-04 12:17:55] 2025-06-04 06:21:54,201 | INFO     | intersect: -27728584608.675873
[2025-06-04 12:17:55] 2025-06-04 06:21:54,201 | INFO     | chi2: 1.7435513321972067
[2025-06-04 12:17:55] 2025-06-04 06:21:54,201 | INFO     | current chi2=1.7435513321972067 (change=30.69374140668281 %)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,202 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,203 | INFO     | sum of deviations: 43062066232.00001
[2025-06-04 12:17:55] 2025-06-04 06:21:54,203 | INFO     | mean x: 1749011207.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,203 | INFO     | mean y: 2456289.0443349755
[2025-06-04 12:17:55] 2025-06-04 06:21:54,204 | INFO     | -- intersect: -29033187386.01122
[2025-06-04 12:17:55] 2025-06-04 06:21:54,204 | INFO     | intersect: -29033187386.01122
[2025-06-04 12:17:55] 2025-06-04 06:21:54,209 | INFO     | chi2: 1.7441699975145557
[2025-06-04 12:17:55] 2025-06-04 06:21:54,210 | INFO     | current chi2=1.7441699975145557 (change=-0.03548305724783924 %)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,210 | INFO     | right removable region: 202
[2025-06-04 12:17:55] 2025-06-04 06:21:54,210 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,212 | INFO     | sum of deviations: -7446048021.000001
[2025-06-04 12:17:55] 2025-06-04 06:21:54,212 | INFO     | mean x: 1749011664.5
[2025-06-04 12:17:55] 2025-06-04 06:21:54,212 | INFO     | mean y: 2476053.701923077
[2025-06-04 12:17:55] 2025-06-04 06:21:54,212 | INFO     | -- intersect: 4669716206.930282
[2025-06-04 12:17:55] 2025-06-04 06:21:54,212 | INFO     | intersect: 4669716206.930282
[2025-06-04 12:17:55] 2025-06-04 06:21:54,213 | INFO     | chi2: 0.8112700223421958
[2025-06-04 12:17:55] 2025-06-04 06:21:54,213 | INFO     | current chi2=0.8112700223421958 (change=67.75197327479951 %)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,213 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,215 | INFO     | sum of deviations: -6417856909.000001
[2025-06-04 12:17:55] 2025-06-04 06:21:54,215 | INFO     | mean x: 1749011817.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,215 | INFO     | mean y: 2475244.300492611
[2025-06-04 12:17:55] 2025-06-04 06:21:54,215 | INFO     | -- intersect: 4329872595.72079
[2025-06-04 12:17:55] 2025-06-04 06:21:54,216 | INFO     | intersect: 4329872595.72079
[2025-06-04 12:17:55] 2025-06-04 06:21:54,216 | INFO     | chi2: 0.797867222487186
[2025-06-04 12:17:55] 2025-06-04 06:21:54,216 | INFO     | current chi2=0.797867222487186 (change=1.6520763107103285 %)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,216 | INFO     | left removable region: 20
[2025-06-04 12:17:55] 2025-06-04 06:21:54,217 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 12:17:55] 2025-06-04 06:21:54,218 | INFO     | sum of deviations: 3960759402.0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,218 | INFO     | mean x: 1749011786.5
[2025-06-04 12:17:55] 2025-06-04 06:21:54,218 | INFO     | mean y: 2488179.4725274723
[2025-06-04 12:17:55] 2025-06-04 06:21:54,218 | INFO     | -- intersect: -3703394970.007156
[2025-06-04 12:17:55] 2025-06-04 06:21:54,219 | INFO     | intersect: -3703394970.007156
[2025-06-04 12:17:55] 2025-06-04 06:21:54,219 | INFO     | chi2: 0.001231056467965766
[2025-06-04 12:17:55] 2025-06-04 06:21:54,219 | INFO     | -- intersect: -3703394970.007156
[2025-06-04 12:17:55] 2025-06-04 06:21:54,219 | INFO     | current memory leak: 2.12 B/s (using 182 data points, chi2=0.00)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,220 | INFO     | ..............................
[2025-06-04 12:17:55] 2025-06-04 06:21:54,220 | INFO     | . Timing measurements:
[2025-06-04 12:17:55] 2025-06-04 06:21:54,220 | INFO     | . get job = 0 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,220 | INFO     | . initial setup = 2 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | . payload setup = 17 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | . stage-in = 0 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | . payload execution = 13005 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | . stage-out = 5 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | . log creation = 1 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,221 | INFO     | ..............................
[2025-06-04 12:17:55] 2025-06-04 06:21:54,499 | INFO     | 
[2025-06-04 12:17:55] 2025-06-04 06:21:54,499 | INFO     | job summary report
[2025-06-04 12:17:55] 2025-06-04 06:21:54,499 | INFO     | --------------------------------------------------
[2025-06-04 12:17:55] 2025-06-04 06:21:54,499 | INFO     | PanDA job id: 6677675347
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | task id: 45006595
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | errors: (none)
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | pilot state: finished 
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | transexitcode: 0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | exeerrorcode: 0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | exeerrordiag: 
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | exitcode: 0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | exitmsg: OK
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | cpuconsumptiontime: 49201 s
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | nevents: 400
[2025-06-04 12:17:55] 2025-06-04 06:21:54,500 | INFO     | neventsw: 0
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | pid: 30812
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | pgrp: 30812
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | corecount: 8
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | event service: False
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | sizes: {0: 2405013, 1: 2405212, 2: 2405212, 12: 2405240, 13: 2405474, 23: 2405530, 13023: 2434997, 13030: 2443938, 13033: 2443994, 13118: 2444164}
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | --------------------------------------------------
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | 
[2025-06-04 12:17:55] 2025-06-04 06:21:54,501 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 12:17:55] 2025-06-04 06:21:55,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:17:55] 2025-06-04 06:21:55,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:17:55] 2025-06-04 06:21:55,054 | INFO     | job 6677675347 has completed (purged errors)
[2025-06-04 12:17:55] 2025-06-04 06:21:55,054 | INFO     | overall cleanup function is called
[2025-06-04 12:17:55] 2025-06-04 06:21:56,067 | INFO     | --- collectZombieJob: --- 10, [30812]
[2025-06-04 12:17:55] 2025-06-04 06:21:56,067 | INFO     | zombie collector waiting for pid 30812
[2025-06-04 12:17:55] 2025-06-04 06:21:56,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:17:55] 2025-06-04 06:21:56,067 | INFO     | collected zombie processes
[2025-06-04 12:17:55] 2025-06-04 06:21:56,068 | INFO     | will attempt to kill all subprocesses of pid=30812
[2025-06-04 12:17:55] 2025-06-04 06:21:56,193 | INFO     | process IDs to be killed: [30812] (in reverse order)
[2025-06-04 12:17:55] 2025-06-04 06:21:57,109 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:17:55] 2025-06-04 06:21:57,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:17:55] 2025-06-04 06:21:57,113 | INFO     | did not find any defunct processes belonging to 30812
[2025-06-04 12:17:55] 2025-06-04 06:21:57,116 | INFO     | did not find any defunct processes belonging to 30812
[2025-06-04 12:17:55] 2025-06-04 06:21:57,116 | INFO     | ready for new job
[2025-06-04 12:17:55] 2025-06-04 06:21:57,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:17:55] 2025-06-04 06:21:57,118 | INFO     | **************************************
[2025-06-04 12:17:55] 2025-06-04 06:21:57,119 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:17:55] 2025-06-04 06:21:57,119 | INFO     | **************************************
[2025-06-04 12:17:55] 2025-06-04 06:21:57,119 | INFO     | 
[2025-06-04 12:17:55] 2025-06-04 06:21:57,119 | INFO     | pilot is running in a VM
[2025-06-04 12:17:55] 2025-06-04 06:21:57,119 | INFO     | architecture information:
[2025-06-04 12:17:55] 2025-06-04 06:21:57,133 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:17:55] 2025-06-04 06:21:57,447 | INFO     | cat /etc/os-release:
[2025-06-04 12:17:55] NAME="CentOS Linux"
[2025-06-04 12:17:55] VERSION="7 (Core)"
[2025-06-04 12:17:55] ID="centos"
[2025-06-04 12:17:55] ID_LIKE="rhel fedora"
[2025-06-04 12:17:55] VERSION_ID="7"
[2025-06-04 12:17:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:17:55] ANSI_COLOR="0;31"
[2025-06-04 12:17:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:17:55] HOME_URL="https://www.centos.org/"
[2025-06-04 12:17:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:17:55] 
[2025-06-04 12:17:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:17:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:17:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:17:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:17:55] 
[2025-06-04 12:17:55] 2025-06-04 06:21:57,447 | INFO     | **************************************
[2025-06-04 12:17:55] 2025-06-04 06:21:57,949 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 12:17:55] 2025-06-04 06:21:58,189 | INFO     | sufficient remaining disk space (496656973824 B)
[2025-06-04 12:17:55] 2025-06-04 06:21:58,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:17:55] 2025-06-04 06:21:58,189 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:17:55] 2025-06-04 06:21:58,189 | INFO     | update_server=False
[2025-06-04 12:17:55] 2025-06-04 06:21:58,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:17:55] 2025-06-04 06:21:58,292 | INFO     | all job control threads have been joined
[2025-06-04 12:17:55] 2025-06-04 06:21:58,626 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:17:55] 2025-06-04 06:21:58,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:17:55] 2025-06-04 06:21:58,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:17:55] 2025-06-04 06:21:58,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:55] 2025-06-04 06:21:58,647 | INFO     | aborting loop
[2025-06-04 12:17:55] 2025-06-04 06:21:59,004 | INFO     | all payload control threads have been joined
[2025-06-04 12:17:55] 2025-06-04 06:21:59,195 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,214 | INFO     | all data control threads have been joined
[2025-06-04 12:17:55] 2025-06-04 06:21:59,267 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,284 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,298 | INFO     | [job] control thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:55] 2025-06-04 06:21:59,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:17:55] 2025-06-04 06:21:59,600 | INFO     | [job] validate thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,653 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:21:59,986 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,009 | INFO     | [payload] control thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,154 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,156 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,220 | INFO     | [data] control thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,383 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:00,594 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:01,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:17:55] 2025-06-04 06:22:01,413 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:05,263 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:17:55] 2025-06-04 06:22:06,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249261164352)>', '<ExcThread(monitor, started 140248952575744)>']
[2025-06-04 12:17:55] 2025-06-04 06:22:06,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:17:55] 2025-06-04 06:22:06,672 | INFO     | [monitor] control thread has ended
[2025-06-04 12:17:55] 2025-06-04 06:22:11,265 | INFO     | all workflow threads have been joined
[2025-06-04 12:17:55] 2025-06-04 06:22:11,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:17:55] 2025-06-04 06:22:11,266 | INFO     | traces error code: 0
[2025-06-04 12:17:55] 2025-06-04 06:22:11,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:17:55] 2025-06-04 06:22:11,542 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:17:55] 2025-06-04 06:22:11,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:17:55] 2025-06-04 06:22:11,554 [wrapper] pilotpid: 22439
[2025-06-04 12:17:55] 2025-06-04 06:22:11,560 [wrapper] Pilot exit status: 0
[2025-06-04 12:17:55] 2025-06-04 06:22:11,913 [wrapper] pandaids: 6677675347
[2025-06-04 12:17:55] 2025-06-04 06:22:13,001 [wrapper] cleanup supervisor_pilot  3162 22440
[2025-06-04 12:17:55] 2025-06-04 06:22:13,067 [wrapper] Test setup, not cleaning
[2025-06-04 12:17:55] 2025-06-04 06:22:13,172 [wrapper] apfmon messages muted
[2025-06-04 12:17:55] 2025-06-04 06:22:13,278 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:17:55] 2025-06-04 06:22:13,361 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:17:55]  *** Error codes and diagnostics ***
[2025-06-04 12:17:55]     "exeErrorCode": 0,
[2025-06-04 12:17:55]     "exeErrorDiag": "",
[2025-06-04 12:17:55]     "pilotErrorCode": 0,
[2025-06-04 12:17:55]     "pilotErrorDiag": "",
[2025-06-04 12:17:55]  *** Listing of results directory ***
[2025-06-04 12:17:55] total 387912
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:35 queuedata.json
[2025-06-04 12:17:55] -rwx------. 1 boinc boinc     37140 Jun  3 16:36 runpilot2-wrapper.sh
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:17:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:42 run_atlas
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:42 job.xml
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc 214860573 Jun  4 04:42 EVNT.45006593._001435.pool.root.1
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc      6392 Jun  4 04:42 init_data.xml
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:42 start_atlas.sh
[2025-06-04 12:17:55] drwxrwx--x. 2 boinc boinc        68 Jun  4 04:42 shared
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc    508880 Jun  4 04:42 input.tar.gz
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:42 boinc_lockfile
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:42 pandaJob.out
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc    986077 Jun  4 04:42 agis_schedconf.cvmfs.json
[2025-06-04 12:17:55] drwx------. 4 boinc boinc      4096 Jun  4 04:42 pilot3
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc 175524892 Jun  4 08:19 HITS.45006595._035704.pool.root.1
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc       530 Jun  4 08:19 boinc_task_state.xml
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc      1018 Jun  4 08:20 memory_monitor_summary.json
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc   1603667 Jun  4 08:20 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc    367257 Jun  4 08:20 log.45006595._035704.job.log.tgz.1
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc        95 Jun  4 08:21 pilot_heartbeat.json
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc      7685 Jun  4 08:21 heartbeat.json
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc      4416 Jun  4 08:22 pilotlog.txt
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc   1141722 Jun  4 08:22 log.45006595._035704.job.log.1
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc       357 Jun  4 08:22 output.list
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc       620 Jun  4 08:22 runtime_log
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc   1525760 Jun  4 08:22 result.tar.gz
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc      8659 Jun  4 08:22 runtime_log.err
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc       656 Jun  4 08:22 blYKDm7vhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVakKDmlZihem.diag
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:17 boinc_mmap_file
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:17 wrapper_checkpoint.txt
[2025-06-04 12:17:55] -rw-r--r--. 1 boinc boinc     20504 Jun  4 12:17 stderr.txt
[2025-06-04 12:17:55] HITS file was successfully produced:
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc 175524892 Jun  4 08:19 shared/HITS.pool.root.1
[2025-06-04 12:17:55]  *** Contents of shared directory: ***
[2025-06-04 12:17:55] total 383248
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc 214860573 Jun  4 04:42 ATLAS.root_0
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:42 start_atlas.sh
[2025-06-04 12:17:55] -rw-r--r--. 2 boinc boinc    508880 Jun  4 04:42 input.tar.gz
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc 175524892 Jun  4 08:19 HITS.pool.root.1
[2025-06-04 12:17:55] -rw-------. 1 boinc boinc   1525760 Jun  4 08:22 result.tar.gz
12:17:57 (18541): run_atlas exited; CPU time 49371.550506
12:17:57 (18541): called boinc_finish(0)

</stderr_txt>
]]>

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