Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:20:38 (1360224): wrapper (7.7.26015): starting
13:20:38 (1360224): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:20:38] Arguments: --nthreads 8
[2025-06-03 13:20:38] Threads: 8
[2025-06-03 13:20:38] Checking for CVMFS
[2025-06-03 13:20:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:20:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:20:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:20:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:20:38] 2.12.6.0 814677 89495 881420 146750 2 66 17357098 21551105 4192 16776704 1 293541822 99.329 535928190 27517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:20:38] CVMFS is ok
[2025-06-03 13:20:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:20:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:20:38] Further information can be found at the LHC@home message board.
[2025-06-03 13:20:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:20:38] Checking for apptainer binary...
[2025-06-03 13:20:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:20:38] Running /usr/bin/apptainer --version
[2025-06-03 13:20:38] apptainer version 1.4.1-1.el9
[2025-06-03 13:20:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:20:38] c-16-30.aglt2.org
[2025-06-03 13:20:38] apptainer works
[2025-06-03 13:20:38] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:20:38] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:20:38] Starting ATLAS job with PandaID=6677675321
[2025-06-03 13:20:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:33:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:33:10] 2025-06-03 21:32:31,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:33:10] 2025-06-03 21:32:31,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:33:10] 2025-06-03 21:32:31,433 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:33:10] 2025-06-03 21:32:31,434 | INFO     | sum of square deviations: 4672949540.437219
[2025-06-03 17:33:10] 2025-06-03 21:32:31,436 | INFO     | sum of deviations: -38524479360.33602
[2025-06-03 17:33:10] 2025-06-03 21:32:31,436 | INFO     | mean x: 1748978781.251012
[2025-06-03 17:33:10] 2025-06-03 21:32:31,480 | INFO     | mean y: 2060945.3441295547
[2025-06-03 17:33:10] 2025-06-03 21:32:31,480 | INFO     | -- intersect: 14420897779.962738
[2025-06-03 17:33:10] 2025-06-03 21:32:31,480 | INFO     | intersect: 14420897779.962738
[2025-06-03 17:33:10] 2025-06-03 21:32:31,481 | INFO     | chi2: 4.9219199529698905
[2025-06-03 17:33:10] 2025-06-03 21:32:31,482 | INFO     | sum of square deviations: 4394892355.123936
[2025-06-03 17:33:10] 2025-06-03 21:32:31,546 | INFO     | sum of deviations: -11309551869.99172
[2025-06-03 17:33:10] 2025-06-03 21:32:31,546 | INFO     | mean x: 1748978628.7520661
[2025-06-03 17:33:10] 2025-06-03 21:32:31,546 | INFO     | mean y: 2075696.9834710744
[2025-06-03 17:33:10] 2025-06-03 21:32:31,547 | INFO     | -- intersect: 4502792193.103587
[2025-06-03 17:33:10] 2025-06-03 21:32:31,547 | INFO     | intersect: 4502792193.103587
[2025-06-03 17:33:10] 2025-06-03 21:32:31,547 | INFO     | chi2: 3.485244266397226
[2025-06-03 17:33:10] 2025-06-03 21:32:31,547 | INFO     | current chi2=3.485244266397226 (change=29.189334655996863 %)
[2025-06-03 17:33:10] 2025-06-03 21:32:31,574 | INFO     | sum of square deviations: 4128046907.291145
[2025-06-03 17:33:10] 2025-06-03 21:32:31,630 | INFO     | sum of deviations: -12105240852.417728
[2025-06-03 17:33:10] 2025-06-03 21:32:31,630 | INFO     | mean x: 1748978476.2405064
[2025-06-03 17:33:10] 2025-06-03 21:32:31,630 | INFO     | mean y: 2075246.4810126582
[2025-06-03 17:33:10] 2025-06-03 21:32:31,631 | INFO     | -- intersect: 5130845867.5685005
[2025-06-03 17:33:10] 2025-06-03 21:32:31,631 | INFO     | intersect: 5130845867.5685005
[2025-06-03 17:33:10] 2025-06-03 21:32:31,631 | INFO     | chi2: 3.4768192716851796
[2025-06-03 17:33:10] 2025-06-03 21:32:31,631 | INFO     | current chi2=3.4768192716851796 (change=0.2417332636703647 %)
[2025-06-03 17:33:10] 2025-06-03 21:32:31,632 | INFO     | right removable region: 236
[2025-06-03 17:33:10] 2025-06-03 21:32:31,632 | INFO     | sum of square deviations: 4394869602.615695
[2025-06-03 17:33:10] 2025-06-03 21:32:31,646 | INFO     | sum of deviations: -82843701295.42145
[2025-06-03 17:33:10] 2025-06-03 21:32:31,647 | INFO     | mean x: 1748978933.7561984
[2025-06-03 17:33:10] 2025-06-03 21:32:31,647 | INFO     | mean y: 2085159.2809917356
[2025-06-03 17:33:10] 2025-06-03 21:32:31,647 | INFO     | -- intersect: 32970500939.773746
[2025-06-03 17:33:10] 2025-06-03 21:32:31,647 | INFO     | intersect: 32970500939.773746
[2025-06-03 17:33:10] 2025-06-03 21:32:31,648 | INFO     | chi2: 2.8296039871057013
[2025-06-03 17:33:10] 2025-06-03 21:32:31,648 | INFO     | current chi2=2.8296039871057013 (change=42.510158349927735 %)
[2025-06-03 17:33:10] 2025-06-03 21:32:31,648 | INFO     | sum of square deviations: 4128045689.7805862
[2025-06-03 17:33:10] 2025-06-03 21:32:31,658 | INFO     | sum of deviations: -106599999967.45573
[2025-06-03 17:33:10] 2025-06-03 21:32:31,658 | INFO     | mean x: 1748979086.2616034
[2025-06-03 17:33:10] 2025-06-03 21:32:31,658 | INFO     | mean y: 2098693.620253165
[2025-06-03 17:33:10] 2025-06-03 21:32:31,659 | INFO     | -- intersect: 45166611043.888695
[2025-06-03 17:33:10] 2025-06-03 21:32:31,659 | INFO     | intersect: 45166611043.888695
[2025-06-03 17:33:10] 2025-06-03 21:32:31,659 | INFO     | chi2: 2.160748493432317
[2025-06-03 17:33:10] 2025-06-03 21:32:31,659 | INFO     | current chi2=2.160748493432317 (change=23.637777467140626 %)
[2025-06-03 17:33:10] 2025-06-03 21:32:31,660 | INFO     | left removable region: 20
[2025-06-03 17:33:10] 2025-06-03 21:32:31,660 | INFO     | sum of square deviations: 3125053917.4814987
[2025-06-03 17:33:10] 2025-06-03 21:32:31,673 | INFO     | sum of deviations: -63733546812.90739
[2025-06-03 17:33:10] 2025-06-03 21:32:31,673 | INFO     | mean x: 1748979055.7592592
[2025-06-03 17:33:10] 2025-06-03 21:32:31,673 | INFO     | mean y: 2105004.078703704
[2025-06-03 17:33:10] 2025-06-03 21:32:31,674 | INFO     | -- intersect: 35671453907.62038
[2025-06-03 17:33:10] 2025-06-03 21:32:31,674 | INFO     | intersect: 35671453907.62038
[2025-06-03 17:33:10] 2025-06-03 21:32:31,674 | INFO     | chi2: 0.5235953974641161
[2025-06-03 17:33:10] 2025-06-03 21:32:31,674 | INFO     | -- intersect: 35671453907.62038
[2025-06-03 17:33:10] 2025-06-03 21:32:31,675 | INFO     | current memory leak: -20.39 B/s (using 216 data points, chi2=0.52)
[2025-06-03 17:33:10] 2025-06-03 21:32:31,675 | INFO     | ..............................
[2025-06-03 17:33:10] 2025-06-03 21:32:31,696 | INFO     | . Timing measurements:
[2025-06-03 17:33:10] 2025-06-03 21:32:31,696 | INFO     | . get job = 0 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . initial setup = 2 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . payload setup = 6 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . stage-in = 0 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . payload execution = 15014 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . stage-out = 9 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | . log creation = 0 s
[2025-06-03 17:33:10] 2025-06-03 21:32:31,697 | INFO     | ..............................
[2025-06-03 17:33:10] 2025-06-03 21:32:31,696 | INFO     | monitor loop #923: job 0:6677675321 is in state 'finished'
[2025-06-03 17:33:10] 2025-06-03 21:32:31,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:33:10] 2025-06-03 21:32:32,519 | INFO     | 
[2025-06-03 17:33:10] 2025-06-03 21:32:32,519 | INFO     | job summary report
[2025-06-03 17:33:10] 2025-06-03 21:32:32,519 | INFO     | --------------------------------------------------
[2025-06-03 17:33:10] 2025-06-03 21:32:32,519 | INFO     | PanDA job id: 6677675321
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | task id: 45006595
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | errors: (none)
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | pilot state: finished 
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | transexitcode: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | exeerrorcode: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:32,520 | INFO     | exeerrordiag: 
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | exitcode: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | exitmsg: OK
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | cpuconsumptiontime: 63328 s
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | nevents: 400
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | neventsw: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | pid: 1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:32,521 | INFO     | pgrp: 1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:32,522 | INFO     | corecount: 8
[2025-06-03 17:33:10] 2025-06-03 21:32:32,522 | INFO     | event service: False
[2025-06-03 17:33:10] 2025-06-03 21:32:32,522 | INFO     | sizes: {0: 2405079, 1: 2405221, 5: 2405427, 12: 2405483, 15024: 2436024, 15026: 2436023, 15038: 2445170, 15039: 2445226, 15086: 2445396}
[2025-06-03 17:33:10] 2025-06-03 21:32:32,522 | INFO     | --------------------------------------------------
[2025-06-03 17:33:10] 2025-06-03 21:32:32,522 | INFO     | 
[2025-06-03 17:33:10] 2025-06-03 21:32:32,527 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-06-03 17:33:10] 2025-06-03 21:32:32,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:33:10] 2025-06-03 21:32:32,758 | INFO     | job 6677675321 has completed (purged errors)
[2025-06-03 17:33:10] 2025-06-03 21:32:32,758 | INFO     | overall cleanup function is called
[2025-06-03 17:33:10] 2025-06-03 21:32:32,914 | INFO     | PID=1363786 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 17:33:10] 2025-06-03 21:32:32,915 | INFO     | .. there are 33 such processes running
[2025-06-03 17:33:10] 2025-06-03 21:32:33,788 | INFO     | --- collectZombieJob: --- 10, [1370226]
[2025-06-03 17:33:10] 2025-06-03 21:32:33,788 | INFO     | zombie collector waiting for pid 1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:33,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:33:10] 2025-06-03 21:32:33,788 | INFO     | collected zombie processes
[2025-06-03 17:33:10] 2025-06-03 21:32:33,788 | INFO     | will attempt to kill all subprocesses of pid=1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:35,611 | INFO     | process IDs to be killed: [1370226] (in reverse order)
[2025-06-03 17:33:10] 2025-06-03 21:32:36,488 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:33:10] 2025-06-03 21:32:36,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:33:10] 2025-06-03 21:32:36,528 | INFO     | did not find any defunct processes belonging to 1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:36,601 | INFO     | did not find any defunct processes belonging to 1370226
[2025-06-03 17:33:10] 2025-06-03 21:32:36,602 | INFO     | ready for new job
[2025-06-03 17:33:10] 2025-06-03 21:32:36,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:33:10] 2025-06-03 21:32:36,604 | INFO     | **************************************
[2025-06-03 17:33:10] 2025-06-03 21:32:36,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:33:10] 2025-06-03 21:32:36,604 | INFO     | **************************************
[2025-06-03 17:33:10] 2025-06-03 21:32:36,611 | INFO     | 
[2025-06-03 17:33:10] 2025-06-03 21:32:36,628 | INFO     | architecture information:
[2025-06-03 17:33:10] 2025-06-03 21:32:36,634 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:33:10] 2025-06-03 21:32:36,725 | INFO     | cat /etc/os-release:
[2025-06-03 17:33:10] NAME="CentOS Linux"
[2025-06-03 17:33:10] VERSION="7 (Core)"
[2025-06-03 17:33:10] ID="centos"
[2025-06-03 17:33:10] ID_LIKE="rhel fedora"
[2025-06-03 17:33:10] VERSION_ID="7"
[2025-06-03 17:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:33:10] ANSI_COLOR="0;31"
[2025-06-03 17:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:33:10] HOME_URL="https://www.centos.org/"
[2025-06-03 17:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:33:10] 
[2025-06-03 17:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:33:10] 
[2025-06-03 17:33:10] 2025-06-03 21:32:36,725 | INFO     | **************************************
[2025-06-03 17:33:10] 2025-06-03 21:32:37,237 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-06-03 17:33:10] 2025-06-03 21:32:37,486 | INFO     | sufficient remaining disk space (1855302139904 B)
[2025-06-03 17:33:10] 2025-06-03 21:32:37,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:33:10] 2025-06-03 21:32:37,487 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:33:10] 2025-06-03 21:32:37,487 | INFO     | update_server=False
[2025-06-03 17:33:10] 2025-06-03 21:32:37,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:33:10] 2025-06-03 21:32:37,511 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:33:10] 2025-06-03 21:32:37,511 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:33:10] 2025-06-03 21:32:37,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:33:10] 2025-06-03 21:32:37,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:33:10] 2025-06-03 21:32:37,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:33:10] 2025-06-03 21:32:37,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:33:10] 2025-06-03 21:32:37,812 | INFO     | all data control threads have been joined
[2025-06-03 17:33:10] 2025-06-03 21:32:37,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:33:10] 2025-06-03 21:32:37,813 | INFO     | aborting loop
[2025-06-03 17:33:10] 2025-06-03 21:32:37,929 | INFO     | all job control threads have been joined
[2025-06-03 17:33:10] 2025-06-03 21:32:38,278 | INFO     | all payload control threads have been joined
[2025-06-03 17:33:10] 2025-06-03 21:32:38,495 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,592 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,754 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,818 | INFO     | [data] control thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,819 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,935 | INFO     | [job] control thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:38,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:33:10] 2025-06-03 21:32:39,000 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,012 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,236 | INFO     | [job] validate thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,284 | INFO     | [payload] control thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,861 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,882 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:39,970 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:41,003 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:41,665 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:33:10] 2025-06-03 21:32:43,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244869687104)>', '<ExcThread(monitor, started 140244229809920)>']
[2025-06-03 17:33:10] 2025-06-03 21:32:43,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:33:10] 2025-06-03 21:32:43,586 | INFO     | [monitor] control thread has ended
[2025-06-03 17:33:10] 2025-06-03 21:32:48,151 | INFO     | all workflow threads have been joined
[2025-06-03 17:33:10] 2025-06-03 21:32:48,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:33:10] 2025-06-03 21:32:48,151 | INFO     | traces error code: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:48,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:33:10] 2025-06-03 21:32:49,782 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:33:10] 2025-06-03 21:32:49,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:33:10] 2025-06-03 21:32:49,836 [wrapper] pilotpid: 1363786
[2025-06-03 17:33:10] 2025-06-03 21:32:49,892 [wrapper] Pilot exit status: 0
[2025-06-03 17:33:10] 2025-06-03 21:32:49,971 [wrapper] pandaids: 6677675321
[2025-06-03 17:33:10] 2025-06-03 21:32:50,360 [wrapper] cleanup supervisor_pilot 2764130 1363787
[2025-06-03 17:33:10] 2025-06-03 21:32:50,392 [wrapper] Test setup, not cleaning
[2025-06-03 17:33:10] 2025-06-03 21:32:50,421 [wrapper] apfmon messages muted
[2025-06-03 17:33:10] 2025-06-03 21:32:50,437 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:33:10] 2025-06-03 21:32:50,453 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:33:10]  *** Error codes and diagnostics ***
[2025-06-03 17:33:10]     "exeErrorCode": 0,
[2025-06-03 17:33:10]     "exeErrorDiag": "",
[2025-06-03 17:33:10]     "pilotErrorCode": 0,
[2025-06-03 17:33:10]     "pilotErrorDiag": "",
[2025-06-03 17:33:10]  *** Listing of results directory ***
[2025-06-03 17:33:10] total 385536
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:31 pilot3.tar.gz
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:33 queuedata.json
[2025-06-03 17:33:10] -rwx------. 1 boincer umatlas     37140 Jun  3 10:34 runpilot2-wrapper.sh
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:33:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:20 run_atlas
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:20 job.xml
[2025-06-03 17:33:10] -rw-r--r--. 2 boincer umatlas 214718652 Jun  3 13:20 EVNT.45006593._001434.pool.root.1
[2025-06-03 17:33:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:33:10] drwxrwx--x. 2 boincer umatlas        68 Jun  3 13:20 shared
[2025-06-03 17:33:10] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:20 input.tar.gz
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:20 boinc_lockfile
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 13:20 pandaJob.out
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas    985078 Jun  3 13:20 agis_schedconf.cvmfs.json
[2025-06-03 17:33:10] drwx------. 4 boincer umatlas      4096 Jun  3 13:20 pilot3
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas      6548 Jun  3 17:28 init_data.xml
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas 172978290 Jun  3 17:30 HITS.45006595._035678.pool.root.1
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas       531 Jun  3 17:30 boinc_task_state.xml
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas      1036 Jun  3 17:31 memory_monitor_summary.json
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas    384004 Jun  3 17:31 log.45006595._035678.job.log.tgz.1
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas        95 Jun  3 17:32 pilot_heartbeat.json
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas      7711 Jun  3 17:32 heartbeat.json
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas      4489 Jun  3 17:32 pilotlog.txt
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas   1246246 Jun  3 17:32 log.45006595._035678.job.log.1
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas       357 Jun  3 17:32 output.list
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:32 runtime_log
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas   1648640 Jun  3 17:32 result.tar.gz
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas      8809 Jun  3 17:32 runtime_log.err
[2025-06-03 17:33:10] -rw-------. 1 boincer umatlas       655 Jun  3 17:32 nkiNDm9thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLakKDmOcb5An.diag
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:33 boinc_mmap_file
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas     21111 Jun  3 17:33 stderr.txt
[2025-06-03 17:33:10] -rw-r--r--. 1 boincer umatlas        28 Jun  3 17:33 wrapper_checkpoint.txt
[2025-06-03 17:33:10] HITS file was successfully produced:
[2025-06-03 17:33:11] -rw-------. 1 boincer umatlas 172978290 Jun  3 17:30 shared/HITS.pool.root.1
[2025-06-03 17:33:11]  *** Contents of shared directory: ***
[2025-06-03 17:33:11] total 380748
[2025-06-03 17:33:11] -rw-r--r--. 2 boincer umatlas 214718652 Jun  3 13:20 ATLAS.root_0
[2025-06-03 17:33:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:33:11] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:20 input.tar.gz
[2025-06-03 17:33:11] -rw-------. 1 boincer umatlas 172978290 Jun  3 17:30 HITS.pool.root.1
[2025-06-03 17:33:11] -rw-------. 1 boincer umatlas   1648640 Jun  3 17:32 result.tar.gz
17:33:12 (1360224): run_atlas exited; CPU time 64118.152089
17:33:12 (1360224): called boinc_finish(0)

</stderr_txt>
]]>

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