Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:47:46 (2386219): wrapper (7.7.26015): starting
10:47:46 (2386219): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:47:46] Arguments: --nthreads 4
[2025-06-05 10:47:46] Threads: 4
[2025-06-05 10:47:46] Checking for CVMFS
[2025-06-05 10:47:46] No cvmfs_config command found, will try listing directly
[2025-06-05 10:47:46] CVMFS is ok
[2025-06-05 10:47:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:47:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:47:46] Further information can be found at the LHC@home message board.
[2025-06-05 10:47:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:47:46] Checking for apptainer binary...
[2025-06-05 10:47:46] which: no apptainer in ((null))
[2025-06-05 10:47:46] apptainer is not installed, using version from CVMFS
[2025-06-05 10:47:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:47:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 10:47:46] apptainer works
[2025-06-05 10:47:46] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:47:46] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:47:46] Starting ATLAS job with PandaID=6677675461
[2025-06-05 10:47:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:06:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:06:24] 2025-06-05 11:04:20,845 | WARNING  | process 2398087 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 13:06:24] 2025-06-05 11:04:20,845 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6677675461/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:06:24] 2025-06-05 11:04:21,879 | INFO     | number of running child processes to parent process 2398087: 1
[2025-06-05 13:06:24] 2025-06-05 11:04:21,879 | INFO     | maximum number of monitored processes: 6
[2025-06-05 13:06:24] 2025-06-05 11:04:22,464 | INFO     | PID=2390177 has CPU usage=22.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 13:06:24] 2025-06-05 11:04:22,464 | INFO     | .. there are 13 such processes running
[2025-06-05 13:06:24] 2025-06-05 11:04:24,382 | INFO     | monitor loop #567: job 0:6677675461 is in state 'finished'
[2025-06-05 13:06:24] 2025-06-05 11:04:24,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,527 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 13:06:24] 2025-06-05 11:04:25,528 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6677675461/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,528 | INFO     | extracted standard info from prmon json
[2025-06-05 13:06:24] 2025-06-05 11:04:25,528 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:06:24] 2025-06-05 11:04:25,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:06:24] 2025-06-05 11:04:25,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:06:24] 2025-06-05 11:04:25,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:06:24] 2025-06-05 11:04:25,532 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:06:24] 2025-06-05 11:04:25,532 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | sum of deviations: 15776312819.000002
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | mean x: 1749117367.5
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | mean y: 2295463.223880597
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | -- intersect: -36985277024.15328
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | intersect: -36985277024.15328
[2025-06-05 13:06:24] 2025-06-05 11:04:25,533 | INFO     | chi2: 1.5608945665446734
[2025-06-05 13:06:24] 2025-06-05 11:04:25,534 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,535 | INFO     | sum of deviations: 15110822705.000002
[2025-06-05 13:06:24] 2025-06-05 11:04:25,535 | INFO     | mean x: 1749117215.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,535 | INFO     | mean y: 2294201.8759689922
[2025-06-05 13:06:24] 2025-06-05 11:04:25,535 | INFO     | -- intersect: -39706396545.822105
[2025-06-05 13:06:24] 2025-06-05 11:04:25,535 | INFO     | intersect: -39706396545.822105
[2025-06-05 13:06:24] 2025-06-05 11:04:25,536 | INFO     | chi2: 1.5632258737192926
[2025-06-05 13:06:24] 2025-06-05 11:04:25,536 | INFO     | current chi2=1.5632258737192926 (change=-0.14935712024290876 %)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,536 | INFO     | right removable region: 128
[2025-06-05 13:06:24] 2025-06-05 11:04:25,536 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | sum of deviations: -3901235663.000001
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | mean x: 1749117520.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | mean y: 2332144.8527131784
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | -- intersect: 10254122567.715754
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | intersect: 10254122567.715754
[2025-06-05 13:06:24] 2025-06-05 11:04:25,537 | INFO     | chi2: 0.013207513538155673
[2025-06-05 13:06:24] 2025-06-05 11:04:25,538 | INFO     | current chi2=0.013207513538155673 (change=99.15384973327231 %)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,538 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,538 | INFO     | sum of deviations: -3387633261.5000005
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | mean x: 1749117672.5
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | mean y: 2331058.4919354836
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | -- intersect: 10025387651.847765
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | intersect: 10025387651.847765
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | chi2: 0.011148490329685857
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | current chi2=0.011148490329685857 (change=15.589786847625998 %)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,539 | INFO     | left removable region: 20
[2025-06-05 13:06:24] 2025-06-05 11:04:25,540 | INFO     | sum of square deviations: 390582207.0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,540 | INFO     | sum of deviations: -1067762361.0000006
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | mean x: 1749117794.5
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | mean y: 2325501.777777778
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | -- intersect: 4784013229.612328
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | intersect: 4784013229.612328
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | chi2: 0.006430269268596084
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | -- intersect: 4784013229.612328
[2025-06-05 13:06:24] 2025-06-05 11:04:25,541 | INFO     | current memory leak: -2.73 B/s (using 108 data points, chi2=0.01)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | ..............................
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | . Timing measurements:
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | . get job = 0 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | . initial setup = 1 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | . payload setup = 9 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,542 | INFO     | . stage-in = 0 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,543 | INFO     | . payload execution = 8147 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,543 | INFO     | . stage-out = 0 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,543 | INFO     | . log creation = 0 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,543 | INFO     | ..............................
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | 
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | job summary report
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | --------------------------------------------------
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | PanDA job id: 6677675461
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | task id: 45006595
[2025-06-05 13:06:24] 2025-06-05 11:04:25,651 | INFO     | errors: (none)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | pilot state: finished 
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | transexitcode: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | exeerrorcode: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | exeerrordiag: 
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | exitcode: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | exitmsg: OK
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | cpuconsumptiontime: 30695 s
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | nevents: 400
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | neventsw: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | pid: 2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | pgrp: 2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | corecount: 4
[2025-06-05 13:06:24] 2025-06-05 11:04:25,652 | INFO     | event service: False
[2025-06-05 13:06:24] 2025-06-05 11:04:25,653 | INFO     | sizes: {0: 2397183, 1: 2397382, 7: 2397588, 11: 2397616, 8160: 2425631, 8162: 2434780, 8170: 2434894}
[2025-06-05 13:06:24] 2025-06-05 11:04:25,653 | INFO     | --------------------------------------------------
[2025-06-05 13:06:24] 2025-06-05 11:04:25,653 | INFO     | 
[2025-06-05 13:06:24] 2025-06-05 11:04:25,653 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-05 13:06:24] 2025-06-05 11:04:25,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:06:24] 2025-06-05 11:04:25,685 | INFO     | job 6677675461 has completed (purged errors)
[2025-06-05 13:06:24] 2025-06-05 11:04:25,685 | INFO     | overall cleanup function is called
[2025-06-05 13:06:24] 2025-06-05 11:04:26,695 | INFO     | --- collectZombieJob: --- 10, [2398087]
[2025-06-05 13:06:24] 2025-06-05 11:04:26,695 | INFO     | zombie collector waiting for pid 2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:26,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:06:24] 2025-06-05 11:04:26,696 | INFO     | collected zombie processes
[2025-06-05 13:06:24] 2025-06-05 11:04:26,696 | INFO     | will attempt to kill all subprocesses of pid=2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:27,468 | INFO     | process IDs to be killed: [2398087] (in reverse order)
[2025-06-05 13:06:24] 2025-06-05 11:04:27,712 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:06:24] 2025-06-05 11:04:27,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:06:24] 2025-06-05 11:04:27,742 | INFO     | did not find any defunct processes belonging to 2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:27,770 | INFO     | did not find any defunct processes belonging to 2398087
[2025-06-05 13:06:24] 2025-06-05 11:04:27,771 | INFO     | ready for new job
[2025-06-05 13:06:24] 2025-06-05 11:04:27,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:06:24] 2025-06-05 11:04:27,773 | INFO     | **************************************
[2025-06-05 13:06:24] 2025-06-05 11:04:27,773 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:06:24] 2025-06-05 11:04:27,773 | INFO     | **************************************
[2025-06-05 13:06:24] 2025-06-05 11:04:27,773 | INFO     | 
[2025-06-05 13:06:24] 2025-06-05 11:04:27,782 | INFO     | architecture information:
[2025-06-05 13:06:24] 2025-06-05 11:04:27,782 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:06:24] 2025-06-05 11:04:27,803 | INFO     | cat /etc/os-release:
[2025-06-05 13:06:24] NAME="CentOS Linux"
[2025-06-05 13:06:24] VERSION="7 (Core)"
[2025-06-05 13:06:24] ID="centos"
[2025-06-05 13:06:24] ID_LIKE="rhel fedora"
[2025-06-05 13:06:24] VERSION_ID="7"
[2025-06-05 13:06:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:06:24] ANSI_COLOR="0;31"
[2025-06-05 13:06:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:06:24] HOME_URL="https://www.centos.org/"
[2025-06-05 13:06:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:06:24] 
[2025-06-05 13:06:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:06:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:06:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:06:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:06:24] 
[2025-06-05 13:06:24] 2025-06-05 11:04:27,803 | INFO     | **************************************
[2025-06-05 13:06:24] 2025-06-05 11:04:28,306 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | INFO     | sufficient remaining disk space (3281985208320 B)
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | INFO     | update_server=False
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:06:24] 2025-06-05 11:04:28,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:06:24] 2025-06-05 11:04:28,334 | INFO     | aborting loop
[2025-06-05 13:06:24] 2025-06-05 11:04:28,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:06:24] 2025-06-05 11:04:28,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:06:24] 2025-06-05 11:04:28,481 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:06:24] 2025-06-05 11:04:28,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:06:24] 2025-06-05 11:04:28,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:06:24] 2025-06-05 11:04:29,208 | INFO     | all job control threads have been joined
[2025-06-05 13:06:24] 2025-06-05 11:04:29,338 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:29,339 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:29,394 | INFO     | all data control threads have been joined
[2025-06-05 13:06:24] 2025-06-05 11:04:29,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:29,622 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:29,623 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:29,758 | INFO     | all payload control threads have been joined
[2025-06-05 13:06:24] 2025-06-05 11:04:29,955 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,214 | INFO     | [job] control thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,339 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,400 | INFO     | [data] control thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,566 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:06:24] 2025-06-05 11:04:30,665 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,745 | INFO     | [job] validate thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,764 | INFO     | [payload] control thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:30,812 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:31,665 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:32,340 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:06:24] 2025-06-05 11:04:33,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22415835240256)>', '<ExcThread(monitor, started 22415593662208)>']
[2025-06-05 13:06:24] 2025-06-05 11:04:34,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:06:24] 2025-06-05 11:04:34,511 | INFO     | [monitor] control thread has ended
[2025-06-05 13:06:24] 2025-06-05 11:04:39,005 | INFO     | all workflow threads have been joined
[2025-06-05 13:06:24] 2025-06-05 11:04:39,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:06:24] 2025-06-05 11:04:39,005 | INFO     | traces error code: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:39,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:06:24] 2025-06-05 11:04:39,144 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:06:24] 2025-06-05 11:04:39,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:06:24] 2025-06-05 11:04:39,151 [wrapper] pilotpid: 2390177
[2025-06-05 13:06:24] 2025-06-05 11:04:39,155 [wrapper] Pilot exit status: 0
[2025-06-05 13:06:24] 2025-06-05 11:04:39,170 [wrapper] pandaids: 6677675461
[2025-06-05 13:06:24] 2025-06-05 11:04:39,326 [wrapper] cleanup supervisor_pilot 2888032 2390178
[2025-06-05 13:06:24] 2025-06-05 11:04:39,330 [wrapper] Test setup, not cleaning
[2025-06-05 13:06:24] 2025-06-05 11:04:39,334 [wrapper] apfmon messages muted
[2025-06-05 13:06:24] 2025-06-05 11:04:39,338 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:06:24] 2025-06-05 11:04:39,346 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:06:24]  *** Error codes and diagnostics ***
[2025-06-05 13:06:24]     "exeErrorCode": 0,
[2025-06-05 13:06:24]     "exeErrorDiag": "",
[2025-06-05 13:06:24]     "pilotErrorCode": 0,
[2025-06-05 13:06:24]     "pilotErrorDiag": "",
[2025-06-05 13:06:24]  *** Listing of results directory ***
[2025-06-05 13:06:24] total 387188
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:41 queuedata.json
[2025-06-05 13:06:24] -rwx------ 1 boinc boinc     37140 Jun  3 16:43 runpilot2-wrapper.sh
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:06:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:47 run_atlas
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:47 job.xml
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc 213424764 Jun  5 10:47 EVNT.45006593._001439.pool.root.1
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc      6687 Jun  5 10:47 init_data.xml
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:47 start_atlas.sh
[2025-06-05 13:06:24] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:47 shared
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc    508885 Jun  5 10:47 input.tar.gz
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:47 boinc_lockfile
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc      2525 Jun  5 10:47 pandaJob.out
[2025-06-05 13:06:24] -rw------- 1 boinc boinc    983281 Jun  5 10:47 agis_schedconf.cvmfs.json
[2025-06-05 13:06:24] -rw------- 1 boinc boinc   1598969 Jun  5 10:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:06:24] drwx------ 4 boinc boinc      4096 Jun  5 10:47 pilot3
[2025-06-05 13:06:24] -rw------- 1 boinc boinc 177109256 Jun  5 13:03 HITS.45006595._035818.pool.root.1
[2025-06-05 13:06:24] -rw------- 1 boinc boinc        95 Jun  5 13:03 pilot_heartbeat.json
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc       529 Jun  5 13:04 boinc_task_state.xml
[2025-06-05 13:06:24] -rw------- 1 boinc boinc      1029 Jun  5 13:04 memory_monitor_summary.json
[2025-06-05 13:06:24] -rw------- 1 boinc boinc    284102 Jun  5 13:04 log.45006595._035818.job.log.tgz.1
[2025-06-05 13:06:24] -rw------- 1 boinc boinc      7697 Jun  5 13:04 heartbeat.json
[2025-06-05 13:06:24] -rw------- 1 boinc boinc      4365 Jun  5 13:04 pilotlog.txt
[2025-06-05 13:06:24] -rw------- 1 boinc boinc    772544 Jun  5 13:04 log.45006595._035818.job.log.1
[2025-06-05 13:06:24] -rw------- 1 boinc boinc       357 Jun  5 13:04 output.list
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:04 runtime_log
[2025-06-05 13:06:24] -rw------- 1 boinc boinc   1075200 Jun  5 13:04 result.tar.gz
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc      9040 Jun  5 13:04 runtime_log.err
[2025-06-05 13:06:24] -rw------- 1 boinc boinc       662 Jun  5 13:04 r5iMDmH2hg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmabkKDmXDmtQn.diag
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc        26 Jun  5 13:06 wrapper_checkpoint.txt
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:06 boinc_mmap_file
[2025-06-05 13:06:24] -rw-r--r-- 1 boinc boinc     20978 Jun  5 13:06 stderr.txt
[2025-06-05 13:06:24] HITS file was successfully produced:
[2025-06-05 13:06:24] -rw------- 1 boinc boinc 177109256 Jun  5 13:03 shared/HITS.pool.root.1
[2025-06-05 13:06:24]  *** Contents of shared directory: ***
[2025-06-05 13:06:24] total 382960
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc 213424764 Jun  5 10:47 ATLAS.root_0
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:47 start_atlas.sh
[2025-06-05 13:06:24] -rw-r--r-- 2 boinc boinc    508885 Jun  5 10:47 input.tar.gz
[2025-06-05 13:06:24] -rw------- 1 boinc boinc 177109256 Jun  5 13:03 HITS.pool.root.1
[2025-06-05 13:06:24] -rw------- 1 boinc boinc   1075200 Jun  5 13:04 result.tar.gz
13:06:25 (2386219): run_atlas exited; CPU time 31176.458875
13:06:25 (2386219): called boinc_finish(0)

</stderr_txt>
]]>

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