Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 13:40:02 (49829): Detected: vboxwrapper 26206
2025-06-03 13:40:02 (49829): Detected: BOINC client v8.0.3
2025-06-03 13:40:02 (49829): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-03 13:40:02 (49829): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 13:40:02 (49829): Create VM. (boinc_1fdc4100f55400f9, slot#4)
2025-06-03 13:40:02 (49829): Setting Memory Size for VM. (4800MB)
2025-06-03 13:40:02 (49829): Setting CPU Count for VM. (8)
2025-06-03 13:40:02 (49829): Setting Chipset Options for VM.
2025-06-03 13:40:03 (49829): Setting Graphics Controller Options for VM.
2025-06-03 13:40:03 (49829): Setting Boot Options for VM.
2025-06-03 13:40:03 (49829): Setting Network Configuration for NAT.
2025-06-03 13:40:03 (49829): Enabling VM Network Access.
2025-06-03 13:40:03 (49829): Disabling USB Support for VM.
2025-06-03 13:40:03 (49829): Disabling COM Port Support for VM.
2025-06-03 13:40:03 (49829): Disabling LPT Port Support for VM.
2025-06-03 13:40:03 (49829): Disabling Audio Support for VM.
2025-06-03 13:40:04 (49829): Disabling Clipboard Support for VM.
2025-06-03 13:40:04 (49829): Disabling Drag and Drop Support for VM.
2025-06-03 13:40:04 (49829): Adding storage controller(s) to VM.
2025-06-03 13:40:04 (49829): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 13:40:14 (49829): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 13:40:14 (49829): forwarding host port 47021 to guest port 80
2025-06-03 13:40:15 (49829): Enabling remote desktop for VM.
2025-06-03 13:40:15 (49829): Required extension pack not installed, remote desktop not enabled.
2025-06-03 13:40:15 (49829): Enabling shared directory for VM.
2025-06-03 13:40:15 (49829): Starting VM using VBoxManage interface. (boinc_1fdc4100f55400f9, slot#4)
2025-06-03 13:40:16 (49829): Successfully started VM. (PID = '50299')
2025-06-03 13:40:16 (49829): Reporting VM Process ID to BOINC.
2025-06-03 13:40:16 (49829): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-03 13:40:16 (49829): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 13:40:16 (49829): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 13:40:16 (49829): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 13:40:16 (49829): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 13:40:16 (49829): Detected: Web Application Enabled (http://localhost:47021)
2025-06-03 13:40:16 (49829): Preference change detected
2025-06-03 13:40:16 (49829): Setting CPU throttle for VM. (100%)
2025-06-03 13:40:16 (49829): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 13:40:18 (49829): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 13:40:18 (49829): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 13:40:21 (49829): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 13:40:21 (49829): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 13:40:21 (49829): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 13:40:30 (49829): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 13:40:30 (49829): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 13:40:37 (49829): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000078 main     Log opened 2025-06-03T18:40:34.983606000Z
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000131 main     OS Product: Linux
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000144 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000155 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000169 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000169 main     Process ID: 1360
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000169 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 13:40:37 (49829): Guest Log: 00:00:00.000606 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 13:40:54 (49829): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 13:40:54 (49829): Guest Log: [INFO] Mounting shared directory
2025-06-03 13:40:55 (49829): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 13:42:40 (49829): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 13:42:40 (49829): Guest Log: [INFO] Detected branch: prod
2025-06-03 13:42:40 (49829): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 13:42:40 (49829): Guest Log: Copying input files
2025-06-03 13:42:41 (49829): Guest Log: Copied input files into RunAtlas.
2025-06-03 13:42:41 (49829): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 13:42:41 (49829): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 13:42:41 (49829): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 13:42:41 (49829): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 13:44:19 (49829): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 13:44:19 (49829): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 13:44:19 (49829): Guest Log: 2.6.3.0 1686 2 32200 146752 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 13:44:21 (49829): Guest Log: copied the webapp to /var/www
2025-06-03 13:44:21 (49829): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-03 13:44:21 (49829): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-03 13:44:21 (49829): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 13:44:21 (49829): Guest Log:  *** Starting ATLAS job. (PandaID=6677551595 taskID=45006595) ***
2025-06-03 14:09:24 (49829): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 14:09:45 (49829): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 14:35:14 (49829): Guest Log:  *** Job finished ***
2025-06-03 14:35:14 (49829): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:41,910 | INFO     | [payload] control thread has finished
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:42,014 | INFO     | [payload] failed_post thread has finished
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:43,918 | INFO     | [data] queue_monitor thread has finished
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:45,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953393030976)>', '<ExcThread(monitor, started 139952935376640)>']
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:45,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:45,851 | INFO     | [monitor] control thread has ended
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,406 | INFO     | all workflow threads have been joined
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,406 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,406 | INFO     | traces error code: 0
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,885 [wrapper] ==== pilot stdout END ====
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,888 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,890 [wrapper] pilotpid: 6148
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,892 [wrapper] Pilot exit status: 0
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,930 [wrapper] pandaids: 6677551595
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,944 [wrapper] cleanup supervisor_pilot 21375 6149
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,946 [wrapper] Test setup, not cleaning
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,949 [wrapper] apfmon messages muted
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,951 [wrapper] ==== wrapper stdout END ====
2025-06-03 14:35:14 (49829): Guest Log: 2025-06-03 19:34:50,953 [wrapper] ==== wrapper stderr END ====
2025-06-03 14:35:14 (49829): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 14:35:14 (49829): Guest Log:     "exeErrorCode": 0,
2025-06-03 14:35:14 (49829): Guest Log:     "exeErrorDiag": "",
2025-06-03 14:35:14 (49829): Guest Log:     "pilotErrorCode": 0,
2025-06-03 14:35:14 (49829): Guest Log:     "pilotErrorDiag": "",
2025-06-03 14:35:14 (49829): Guest Log:  *** Listing of results directory ***
2025-06-03 14:35:14 (49829): Guest Log: total 182240
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 09:07 pilot3.tar.gz
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 09:32 queuedata.json
2025-06-03 14:35:14 (49829): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 09:33 runpilot2-wrapper.sh
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 18:42 start_atlas.sh
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas    508883 Jun  3 18:42 input.tar.gz
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas      8005 Jun  3 18:42 init_data.xml
2025-06-03 14:35:14 (49829): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 18:42 EVNT.45006593._001094.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  3 18:44 pandaJob.out
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas    986893 Jun  3 18:50 agis_schedconf.cvmfs.json
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 18:50 agis_ddmendpoints.agis.ALL.json
2025-06-03 14:35:14 (49829): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 18:50 pilot3
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas 181831361 Jun  3 19:31 HITS.45006595._027346.pool.root.1
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  3 19:32 memory_monitor_summary.json
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas    265072 Jun  3 19:32 log.45006595._027346.job.log.tgz.1
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 19:34 pilot_heartbeat.json
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas      7676 Jun  3 19:34 heartbeat.json
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  3 19:34 pilotlog.txt
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas    245192 Jun  3 19:34 log.45006595._027346.job.log.1
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 19:34 output.list
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 19:34 runtime_log
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas    532480 Jun  3 19:34 result.tar.gz
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas       659 Jun  3 19:34 ZSxKDmaCdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdDjKDmIFMy8m.diag
2025-06-03 14:35:14 (49829): Guest Log: -rw-r--r--. 1 atlas atlas      8606 Jun  3 19:34 runtime_log.err
2025-06-03 14:35:14 (49829): Guest Log: Looking for outputfile HITS.45006595._027346.pool.root.1
2025-06-03 14:35:14 (49829): Guest Log: HITS file was successfully produced
2025-06-03 14:35:14 (49829): Guest Log: -rw-------. 1 atlas atlas 181831361 Jun  3 19:31 /home/atlas/RunAtlas/HITS.45006595._027346.pool.root.1
2025-06-03 14:35:15 (49829): Guest Log: Successfully finished the ATLAS job!
2025-06-03 14:35:15 (49829): Guest Log: Copying the results back to the shared directory!
2025-06-03 14:35:15 (49829): Guest Log:  *** Contents of shared directory: ***
2025-06-03 14:35:15 (49829): Guest Log: total 214044
2025-06-03 14:35:15 (49829): Guest Log: -rw-r--r--. 1 root root 218110134 Jun  3 18:40 ATLAS.root_0
2025-06-03 14:35:15 (49829): Guest Log: -rw-r--r--. 1 root root      8005 Jun  3 18:40 init_data.xml
2025-06-03 14:35:15 (49829): Guest Log: -rw-r--r--. 1 root root    508883 Jun  3 18:40 input.tar.gz
2025-06-03 14:35:15 (49829): Guest Log: -rw-r--r--. 1 root root    532480 Jun  3  2025 result.tar.gz
2025-06-03 14:35:15 (49829): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 18:40 start_atlas.sh
2025-06-03 14:35:15 (49829): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 14:35:15 (49829): VM Completion File Detected.
2025-06-03 14:35:15 (49829): Powering off VM.
2025-06-03 14:35:16 (49829): Successfully stopped VM.
2025-06-03 14:35:16 (49829): Deregistering VM. (boinc_1fdc4100f55400f9, slot#4)
2025-06-03 14:35:16 (49829): Removing network bandwidth throttle group from VM.
2025-06-03 14:35:16 (49829): Removing VM from VirtualBox.
14:35:21 (49829): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN