Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:15:23 (3260): wrapper (7.7.26015): starting
13:15:23 (3260): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:15:23] Arguments: --nthreads 8
[2025-06-03 13:15:23] Threads: 8
[2025-06-03 13:15:23] Checking for CVMFS
[2025-06-03 13:15:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:15:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:15:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:15:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:15:23] 2.11.2.0 21479 67805 433324 146749 0 187 16757843 18432001 3656 130560 0 106858151 98.644 312877549 36558 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 13:15:23] CVMFS is ok
[2025-06-03 13:15:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:15:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:15:23] Further information can be found at the LHC@home message board.
[2025-06-03 13:15:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:15:23] Checking for apptainer binary...
[2025-06-03 13:15:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:15:23] Running /usr/bin/apptainer --version
[2025-06-03 13:15:24] apptainer version 1.3.2-1.el7
[2025-06-03 13:15:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:15:24] c-211-24.aglt2.org
[2025-06-03 13:15:24] apptainer works
[2025-06-03 13:15:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:15:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:15:24] Starting ATLAS job with PandaID=6677675356
[2025-06-03 13:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:51:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:51:46] 2025-06-03 23:47:13,212 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:51:46] 2025-06-03 23:47:13,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:51:46] 2025-06-03 23:47:13,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:51:46] 2025-06-03 23:47:13,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:51:46] 2025-06-03 23:47:13,409 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:51:46] 2025-06-03 23:47:13,433 | INFO     | sum of square deviations: 17426581601.984352
[2025-06-03 19:51:46] 2025-06-03 23:47:13,549 | INFO     | sum of deviations: -189692752579.07315
[2025-06-03 19:51:46] 2025-06-03 23:47:13,550 | INFO     | mean x: 1748982612.8746736
[2025-06-03 19:51:46] 2025-06-03 23:47:13,563 | INFO     | mean y: 2458495.415143603
[2025-06-03 19:51:46] 2025-06-03 23:47:13,563 | INFO     | -- intersect: 19040577021.848232
[2025-06-03 19:51:46] 2025-06-03 23:47:13,563 | INFO     | intersect: 19040577021.848232
[2025-06-03 19:51:46] 2025-06-03 23:47:13,576 | INFO     | chi2: 6.603795469229392
[2025-06-03 19:51:46] 2025-06-03 23:47:13,590 | INFO     | sum of square deviations: 16753360180.476254
[2025-06-03 19:51:46] 2025-06-03 23:47:13,679 | INFO     | sum of deviations: -61829570974.71428
[2025-06-03 19:51:46] 2025-06-03 23:47:13,679 | INFO     | mean x: 1748982460.3968253
[2025-06-03 19:51:46] 2025-06-03 23:47:13,679 | INFO     | mean y: 2487455.5714285714
[2025-06-03 19:51:46] 2025-06-03 23:47:13,680 | INFO     | -- intersect: 6457242442.25505
[2025-06-03 19:51:46] 2025-06-03 23:47:13,707 | INFO     | intersect: 6457242442.25505
[2025-06-03 19:51:46] 2025-06-03 23:47:13,735 | INFO     | chi2: 2.4720035540196923
[2025-06-03 19:51:46] 2025-06-03 23:47:13,736 | INFO     | current chi2=2.4720035540196923 (change=62.566927374748715 %)
[2025-06-03 19:51:46] 2025-06-03 23:47:13,747 | INFO     | sum of square deviations: 16097650950.080336
[2025-06-03 19:51:46] 2025-06-03 23:47:13,844 | INFO     | sum of deviations: -34522022375.57371
[2025-06-03 19:51:46] 2025-06-03 23:47:13,845 | INFO     | mean x: 1748982307.911528
[2025-06-03 19:51:46] 2025-06-03 23:47:13,880 | INFO     | mean y: 2493740.831099196
[2025-06-03 19:51:46] 2025-06-03 23:47:13,880 | INFO     | -- intersect: 3753252566.1678476
[2025-06-03 19:51:46] 2025-06-03 23:47:13,881 | INFO     | intersect: 3753252566.1678476
[2025-06-03 19:51:46] 2025-06-03 23:47:13,881 | INFO     | chi2: 1.596759725561032
[2025-06-03 19:51:46] 2025-06-03 23:47:13,882 | INFO     | current chi2=1.596759725561032 (change=35.40625283630511 %)
[2025-06-03 19:51:46] 2025-06-03 23:47:13,936 | INFO     | sum of square deviations: 15459177589.21736
[2025-06-03 19:51:46] 2025-06-03 23:47:14,084 | INFO     | sum of deviations: -33839916176.06523
[2025-06-03 19:51:46] 2025-06-03 23:47:14,084 | INFO     | mean x: 1748982155.4130435
[2025-06-03 19:51:46] 2025-06-03 23:47:14,085 | INFO     | mean y: 2493903.7635869565
[2025-06-03 19:51:46] 2025-06-03 23:47:14,085 | INFO     | -- intersect: 3830990548.6234393
[2025-06-03 19:51:46] 2025-06-03 23:47:14,085 | INFO     | intersect: 3830990548.6234393
[2025-06-03 19:51:46] 2025-06-03 23:47:14,085 | INFO     | chi2: 1.5962284380257514
[2025-06-03 19:51:46] 2025-06-03 23:47:14,086 | INFO     | current chi2=1.5962284380257514 (change=0.033272854191876755 %)
[2025-06-03 19:51:46] 2025-06-03 23:47:14,086 | INFO     | right removable region: 367
[2025-06-03 19:51:46] 2025-06-03 23:47:14,086 | INFO     | sum of square deviations: 16752945316.679981
[2025-06-03 19:51:46] 2025-06-03 23:47:14,209 | INFO     | sum of deviations: -243614756539.5344
[2025-06-03 19:51:46] 2025-06-03 23:47:14,270 | INFO     | mean x: 1748982765.3994708
[2025-06-03 19:51:46] 2025-06-03 23:47:14,270 | INFO     | mean y: 2470625.328042328
[2025-06-03 19:51:46] 2025-06-03 23:47:14,271 | INFO     | -- intersect: 25435491657.182743
[2025-06-03 19:51:46] 2025-06-03 23:47:14,281 | INFO     | intersect: 25435491657.182743
[2025-06-03 19:51:46] 2025-06-03 23:47:14,282 | INFO     | chi2: 5.279655731365975
[2025-06-03 19:51:46] 2025-06-03 23:47:14,282 | INFO     | current chi2=5.279655731365975 (change=20.05119243976121 %)
[2025-06-03 19:51:46] 2025-06-03 23:47:14,282 | INFO     | left removable region: 10
[2025-06-03 19:51:46] 2025-06-03 23:47:14,354 | INFO     | sum of square deviations: 14114000305.596642
[2025-06-03 19:51:46] 2025-06-03 23:47:14,428 | INFO     | sum of deviations: -81939436265.05885
[2025-06-03 19:51:46] 2025-06-03 23:47:14,428 | INFO     | mean x: 1748982429.9663866
[2025-06-03 19:51:46] 2025-06-03 23:47:14,428 | INFO     | mean y: 2505703.411764706
[2025-06-03 19:51:46] 2025-06-03 23:47:14,428 | INFO     | -- intersect: 10156298479.802122
[2025-06-03 19:51:46] 2025-06-03 23:47:14,429 | INFO     | intersect: 10156298479.802122
[2025-06-03 19:51:46] 2025-06-03 23:47:14,450 | INFO     | chi2: 0.18506726766481393
[2025-06-03 19:51:46] 2025-06-03 23:47:14,451 | INFO     | -- intersect: 10156298479.802122
[2025-06-03 19:51:46] 2025-06-03 23:47:14,451 | INFO     | current memory leak: -5.81 B/s (using 357 data points, chi2=0.19)
[2025-06-03 19:51:46] 2025-06-03 23:47:14,459 | INFO     | ..............................
[2025-06-03 19:51:46] 2025-06-03 23:47:14,459 | INFO     | . Timing measurements:
[2025-06-03 19:51:46] 2025-06-03 23:47:14,459 | INFO     | . get job = 0 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,459 | INFO     | . initial setup = 2 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | . payload setup = 7 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | . stage-in = 0 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | . payload execution = 23360 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | . stage-out = 9 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | . log creation = 1 s
[2025-06-03 19:51:46] 2025-06-03 23:47:14,460 | INFO     | ..............................
[2025-06-03 19:51:46] 2025-06-03 23:47:15,147 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 23:47:15,148 | INFO     | job summary report
[2025-06-03 19:51:46] 2025-06-03 23:47:15,148 | INFO     | --------------------------------------------------
[2025-06-03 19:51:46] 2025-06-03 23:47:15,148 | INFO     | PanDA job id: 6677675356
[2025-06-03 19:51:46] 2025-06-03 23:47:15,148 | INFO     | task id: 45006595
[2025-06-03 19:51:46] 2025-06-03 23:47:15,148 | INFO     | errors: (none)
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | pilot state: finished 
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | transexitcode: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | exeerrorcode: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | exeerrordiag: 
[2025-06-03 19:51:46] 2025-06-03 23:47:15,149 | INFO     | exitcode: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | exitmsg: OK
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | cpuconsumptiontime: 67016 s
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | nevents: 400
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | neventsw: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | pid: 14846
[2025-06-03 19:51:46] 2025-06-03 23:47:15,150 | INFO     | pgrp: 14846
[2025-06-03 19:51:46] 2025-06-03 23:47:15,151 | INFO     | corecount: 8
[2025-06-03 19:51:46] 2025-06-03 23:47:15,151 | INFO     | event service: False
[2025-06-03 19:51:46] 2025-06-03 23:47:15,156 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 23373: 2439476, 23374: 2439475, 23386: 2448628, 23389: 2448684, 23486: 2448854}
[2025-06-03 19:51:46] 2025-06-03 23:47:15,156 | INFO     | --------------------------------------------------
[2025-06-03 19:51:46] 2025-06-03 23:47:15,156 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 23:47:15,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 19:51:46] 2025-06-03 23:47:15,200 | INFO     | PID=8374 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 19:51:46] 2025-06-03 23:47:15,201 | INFO     | .. there are 10 such processes running
[2025-06-03 19:51:46] 2025-06-03 23:47:15,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:51:46] 2025-06-03 23:47:15,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 23:47:15,392 | INFO     | job 6677675356 has completed (purged errors)
[2025-06-03 19:51:46] 2025-06-03 23:47:15,392 | INFO     | overall cleanup function is called
[2025-06-03 19:51:46] 2025-06-03 23:47:16,406 | INFO     | --- collectZombieJob: --- 10, [14846]
[2025-06-03 19:51:46] 2025-06-03 23:47:16,406 | INFO     | zombie collector waiting for pid 14846
[2025-06-03 19:51:46] 2025-06-03 23:47:16,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:51:46] 2025-06-03 23:47:16,407 | INFO     | collected zombie processes
[2025-06-03 19:51:46] 2025-06-03 23:47:16,417 | INFO     | will attempt to kill all subprocesses of pid=14846
[2025-06-03 19:51:46] 2025-06-03 23:47:19,979 | INFO     | process IDs to be killed: [14846] (in reverse order)
[2025-06-03 19:51:46] 2025-06-03 23:47:20,400 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:51:46] 2025-06-03 23:47:20,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:51:46] 2025-06-03 23:47:20,632 | INFO     | did not find any defunct processes belonging to 14846
[2025-06-03 19:51:46] 2025-06-03 23:47:20,775 | INFO     | did not find any defunct processes belonging to 14846
[2025-06-03 19:51:46] 2025-06-03 23:47:20,776 | INFO     | ready for new job
[2025-06-03 19:51:46] 2025-06-03 23:47:20,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:51:46] 2025-06-03 23:47:20,801 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 23:47:20,807 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:51:46] 2025-06-03 23:47:20,807 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 23:47:20,807 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 23:47:20,810 | INFO     | architecture information:
[2025-06-03 19:51:46] 2025-06-03 23:47:20,811 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:51:46] 2025-06-03 23:47:21,101 | INFO     | cat /etc/os-release:
[2025-06-03 19:51:46] NAME="CentOS Linux"
[2025-06-03 19:51:46] VERSION="7 (Core)"
[2025-06-03 19:51:46] ID="centos"
[2025-06-03 19:51:46] ID_LIKE="rhel fedora"
[2025-06-03 19:51:46] VERSION_ID="7"
[2025-06-03 19:51:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:51:46] ANSI_COLOR="0;31"
[2025-06-03 19:51:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:51:46] HOME_URL="https://www.centos.org/"
[2025-06-03 19:51:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:51:46] 
[2025-06-03 19:51:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:51:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:51:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:51:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:51:46] 
[2025-06-03 19:51:46] 2025-06-03 23:47:21,102 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 23:47:21,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 19:51:46] 2025-06-03 23:47:21,878 | INFO     | sufficient remaining disk space (55232692224 B)
[2025-06-03 19:51:46] 2025-06-03 23:47:21,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:51:46] 2025-06-03 23:47:21,879 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:51:46] 2025-06-03 23:47:21,879 | INFO     | update_server=False
[2025-06-03 19:51:46] 2025-06-03 23:47:21,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:51:46] 2025-06-03 23:47:21,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 23:47:21,903 | INFO     | aborting loop
[2025-06-03 19:51:46] 2025-06-03 23:47:21,912 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:51:46] 2025-06-03 23:47:21,912 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:51:46] 2025-06-03 23:47:21,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:51:46] 2025-06-03 23:47:21,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:51:46] 2025-06-03 23:47:22,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 23:47:22,270 | INFO     | all data control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 23:47:22,370 | INFO     | all payload control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 23:47:22,885 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:22,909 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:22,916 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,093 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,094 | INFO     | [job] validate thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,096 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,097 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,178 | INFO     | all job control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 23:47:23,276 | INFO     | [data] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:23,376 | INFO     | [payload] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:24,008 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:24,117 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:24,198 | INFO     | [job] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:24,308 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:24,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 23:47:24,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 23:47:25,445 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:28,774 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 23:47:29,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113813026624)>', '<ExcThread(monitor, started 140113586128640)>']
[2025-06-03 19:51:46] 2025-06-03 23:47:29,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:51:46] 2025-06-03 23:47:29,961 | INFO     | [monitor] control thread has ended
[2025-06-03 19:51:46] 2025-06-03 23:47:34,162 | INFO     | all workflow threads have been joined
[2025-06-03 19:51:46] 2025-06-03 23:47:34,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:51:46] 2025-06-03 23:47:34,165 | INFO     | traces error code: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:34,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:51:46] 2025-06-03 23:47:34,405 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:51:46] 2025-06-03 23:47:34,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:51:46] 2025-06-03 23:47:34,773 [wrapper] pilotpid: 8374
[2025-06-03 19:51:46] 2025-06-03 23:47:34,809 [wrapper] Pilot exit status: 0
[2025-06-03 19:51:46] 2025-06-03 23:47:34,971 [wrapper] pandaids: 6677675356
[2025-06-03 19:51:46] 2025-06-03 23:47:36,621 [wrapper] cleanup supervisor_pilot 15252 8375
[2025-06-03 19:51:46] 2025-06-03 23:47:36,647 [wrapper] Test setup, not cleaning
[2025-06-03 19:51:46] 2025-06-03 23:47:36,683 [wrapper] apfmon messages muted
[2025-06-03 19:51:46] 2025-06-03 23:47:36,701 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:51:46] 2025-06-03 23:47:36,722 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:51:46]  *** Error codes and diagnostics ***
[2025-06-03 19:51:46]     "exeErrorCode": 0,
[2025-06-03 19:51:46]     "exeErrorDiag": "",
[2025-06-03 19:51:46]     "pilotErrorCode": 0,
[2025-06-03 19:51:46]     "pilotErrorDiag": "",
[2025-06-03 19:51:46]  *** Listing of results directory ***
[2025-06-03 19:51:46] total 386664
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:31 pilot3.tar.gz
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 10:35 queuedata.json
[2025-06-03 19:51:46] -rwx------ 1 boincer umatlas     37140 Jun  3 10:36 runpilot2-wrapper.sh
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas       100 Jun  3 13:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:51:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 13:15 run_atlas
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas       105 Jun  3 13:15 job.xml
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas 214860573 Jun  3 13:15 EVNT.45006593._001435.pool.root.1
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:15 start_atlas.sh
[2025-06-03 19:51:46] drwxrwx--x 2 boincer umatlas      4096 Jun  3 13:15 shared
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 13:15 input.tar.gz
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas         0 Jun  3 13:15 boinc_lockfile
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 13:15 pandaJob.out
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas    983734 Jun  3 13:15 agis_schedconf.cvmfs.json
[2025-06-03 19:51:46] drwx------ 4 boincer umatlas      4096 Jun  3 13:15 pilot3
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas 172759758 Jun  3 19:38 HITS.45006595._035713.pool.root.1
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas       530 Jun  3 19:39 boinc_task_state.xml
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas      1056 Jun  3 19:45 memory_monitor_summary.json
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas   1603667 Jun  3 19:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas    457521 Jun  3 19:45 log.45006595._035713.job.log.tgz.1
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas      6034 Jun  3 19:46 init_data.xml
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas        95 Jun  3 19:46 pilot_heartbeat.json
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas      7742 Jun  3 19:47 heartbeat.json
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas      4476 Jun  3 19:47 pilotlog.txt
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas   1788470 Jun  3 19:47 log.45006595._035713.job.log.1
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas       357 Jun  3 19:47 output.list
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:47 runtime_log
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas   2263040 Jun  3 19:47 result.tar.gz
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas      8660 Jun  3 19:47 runtime_log.err
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas       662 Jun  3 19:47 C3FLDm7vhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeakKDmS2xR0n.diag
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:51 wrapper_checkpoint.txt
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:51 boinc_mmap_file
[2025-06-03 19:51:46] -rw-r--r-- 1 boincer umatlas     20995 Jun  3 19:51 stderr.txt
[2025-06-03 19:51:46] HITS file was successfully produced:
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas 172759758 Jun  3 19:38 shared/HITS.pool.root.1
[2025-06-03 19:51:46]  *** Contents of shared directory: ***
[2025-06-03 19:51:46] total 381272
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas 214860573 Jun  3 13:15 ATLAS.root_0
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:15 start_atlas.sh
[2025-06-03 19:51:46] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 13:15 input.tar.gz
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas 172759758 Jun  3 19:38 HITS.pool.root.1
[2025-06-03 19:51:46] -rw------- 1 boincer umatlas   2263040 Jun  3 19:47 result.tar.gz
19:51:47 (3260): run_atlas exited; CPU time 67615.307699
19:51:47 (3260): called boinc_finish(0)

</stderr_txt>
]]>

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