Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:35 (25986): wrapper (7.7.26015): starting
05:13:35 (25986): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:13:36] Arguments: --nthreads 8
[2025-06-04 05:13:36] Threads: 8
[2025-06-04 05:13:36] Checking for CVMFS
[2025-06-04 05:13:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:13:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:13:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:13:38] 2.11.2.0 31527 32795 88100 146765 0 69 24709559 25165824 4293 130560 0 16994104 99.852 18212493 1985 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:13:38] CVMFS is ok
[2025-06-04 05:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:13:38] Checking for apptainer binary...
[2025-06-04 05:13:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:13:38] Running /usr/bin/apptainer --version
[2025-06-04 05:13:38] apptainer version 1.3.2-1.el7
[2025-06-04 05:13:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:23:45] cg-vwn469.simple-grid.lan
[2025-06-04 05:23:45] apptainer works
[2025-06-04 05:23:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:23:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:23:45] Starting ATLAS job with PandaID=6677660694
[2025-06-04 05:23:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:38:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:38:51] 2025-06-04 06:59:13,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:38:51] 2025-06-04 06:59:13,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:38:51] 2025-06-04 06:59:13,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:38:51] 2025-06-04 06:59:13,474 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:38:51] 2025-06-04 06:59:13,474 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,476 | INFO     | sum of deviations: 60566719013.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,476 | INFO     | mean x: 1749014150.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,476 | INFO     | mean y: 2413877.4673366835
[2025-06-04 11:38:51] 2025-06-04 06:59:13,476 | INFO     | -- intersect: -43348742306.083725
[2025-06-04 11:38:51] 2025-06-04 06:59:13,477 | INFO     | intersect: -43348742306.083725
[2025-06-04 11:38:51] 2025-06-04 06:59:13,477 | INFO     | chi2: 5.5881925260087835
[2025-06-04 11:38:51] 2025-06-04 06:59:13,477 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 11:38:51] 2025-06-04 06:59:13,479 | INFO     | sum of deviations: 72371142187.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,479 | INFO     | mean x: 1749013997.5
[2025-06-04 11:38:51] 2025-06-04 06:59:13,479 | INFO     | mean y: 2423665.175257732
[2025-06-04 11:38:51] 2025-06-04 06:59:13,479 | INFO     | -- intersect: -55907208857.66969
[2025-06-04 11:38:51] 2025-06-04 06:59:13,479 | INFO     | intersect: -55907208857.66969
[2025-06-04 11:38:51] 2025-06-04 06:59:13,480 | INFO     | chi2: 4.8051453486877485
[2025-06-04 11:38:51] 2025-06-04 06:59:13,480 | INFO     | current chi2=4.8051453486877485 (change=14.012530414379002 %)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,480 | INFO     | right removable region: 193
[2025-06-04 11:38:51] 2025-06-04 06:59:13,480 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | sum of deviations: -2202948144.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | mean x: 1749014302.5
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | mean y: 2467065.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | -- intersect: 1704333844.411242
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | intersect: 1704333844.411242
[2025-06-04 11:38:51] 2025-06-04 06:59:13,482 | INFO     | chi2: 1.5025681124233514
[2025-06-04 11:38:51] 2025-06-04 06:59:13,483 | INFO     | current chi2=1.5025681124233514 (change=73.11173325847238 %)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,483 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,485 | INFO     | sum of deviations: -21521206626.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,485 | INFO     | mean x: 1749014455.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,485 | INFO     | mean y: 2484149.1164021166
[2025-06-04 11:38:51] 2025-06-04 06:59:13,485 | INFO     | -- intersect: 17983256293.82409
[2025-06-04 11:38:51] 2025-06-04 06:59:13,485 | INFO     | intersect: 17983256293.82409
[2025-06-04 11:38:51] 2025-06-04 06:59:13,486 | INFO     | chi2: 0.9319780490171016
[2025-06-04 11:38:51] 2025-06-04 06:59:13,486 | INFO     | current chi2=0.9319780490171016 (change=37.97432267386525 %)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,486 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,487 | INFO     | sum of deviations: -15521142377.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,487 | INFO     | mean x: 1749014607.5
[2025-06-04 11:38:51] 2025-06-04 06:59:13,487 | INFO     | mean y: 2478484.2065217393
[2025-06-04 11:38:51] 2025-06-04 06:59:13,487 | INFO     | -- intersect: 14056417164.176414
[2025-06-04 11:38:51] 2025-06-04 06:59:13,488 | INFO     | intersect: 14056417164.176414
[2025-06-04 11:38:51] 2025-06-04 06:59:13,488 | INFO     | chi2: 0.9067245731284433
[2025-06-04 11:38:51] 2025-06-04 06:59:13,488 | INFO     | current chi2=0.9067245731284433 (change=2.7096642367587385 %)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,488 | INFO     | left removable region: 30
[2025-06-04 11:38:51] 2025-06-04 06:59:13,488 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | sum of deviations: 2393073676.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | mean x: 1749014882.0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | mean y: 2485484.226993865
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | -- intersect: -3114427537.681512
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | intersect: -3114427537.681512
[2025-06-04 11:38:51] 2025-06-04 06:59:13,490 | INFO     | chi2: 0.00018840447161727435
[2025-06-04 11:38:51] 2025-06-04 06:59:13,491 | INFO     | -- intersect: -3114427537.681512
[2025-06-04 11:38:51] 2025-06-04 06:59:13,491 | INFO     | current memory leak: 1.78 B/s (using 163 data points, chi2=0.00)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | ..............................
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . Timing measurements:
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . get job = 0 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . initial setup = 5 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . payload setup = 182 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . stage-in = 0 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,492 | INFO     | . payload execution = 12295 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,493 | INFO     | . stage-out = 4 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,493 | INFO     | . log creation = 1 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,493 | INFO     | ..............................
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | 
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | job summary report
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | --------------------------------------------------
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | PanDA job id: 6677660694
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | task id: 45006595
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | errors: (none)
[2025-06-04 11:38:51] 2025-06-04 06:59:13,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | pilot state: finished 
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | transexitcode: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | exeerrorcode: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | exeerrordiag: 
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | exitcode: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | exitmsg: OK
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | cpuconsumptiontime: 44997 s
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | nevents: 400
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | neventsw: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | pid: 14258
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | pgrp: 14258
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | corecount: 8
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | event service: False
[2025-06-04 11:38:51] 2025-06-04 06:59:13,671 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 81: 2405770, 87: 2405798, 12481: 2435137
[2025-06-04 11:38:51] 2025-06-04 06:59:13,672 | INFO     | --------------------------------------------------
[2025-06-04 11:38:51] 2025-06-04 06:59:13,672 | INFO     | 
[2025-06-04 11:38:51] 2025-06-04 06:59:13,672 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:38:51] 2025-06-04 06:59:14,206 | INFO     | job 6677660694 has completed (purged errors)
[2025-06-04 11:38:51] 2025-06-04 06:59:14,206 | INFO     | overall cleanup function is called
[2025-06-04 11:38:51] 2025-06-04 06:59:15,215 | INFO     | --- collectZombieJob: --- 10, [14258]
[2025-06-04 11:38:51] 2025-06-04 06:59:15,215 | INFO     | zombie collector waiting for pid 14258
[2025-06-04 11:38:51] 2025-06-04 06:59:15,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:38:51] 2025-06-04 06:59:15,215 | INFO     | collected zombie processes
[2025-06-04 11:38:51] 2025-06-04 06:59:15,215 | INFO     | will attempt to kill all subprocesses of pid=14258
[2025-06-04 11:38:51] 2025-06-04 06:59:15,331 | INFO     | process IDs to be killed: [14258] (in reverse order)
[2025-06-04 11:38:51] 2025-06-04 06:59:16,164 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:38:51] 2025-06-04 06:59:16,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:38:51] 2025-06-04 06:59:16,173 | INFO     | did not find any defunct processes belonging to 14258
[2025-06-04 11:38:51] 2025-06-04 06:59:16,176 | INFO     | did not find any defunct processes belonging to 14258
[2025-06-04 11:38:51] 2025-06-04 06:59:16,176 | INFO     | ready for new job
[2025-06-04 11:38:51] 2025-06-04 06:59:16,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:38:51] 2025-06-04 06:59:16,178 | INFO     | **************************************
[2025-06-04 11:38:51] 2025-06-04 06:59:16,179 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:38:51] 2025-06-04 06:59:16,179 | INFO     | **************************************
[2025-06-04 11:38:51] 2025-06-04 06:59:16,179 | INFO     | 
[2025-06-04 11:38:51] 2025-06-04 06:59:16,179 | INFO     | pilot is running in a VM
[2025-06-04 11:38:51] 2025-06-04 06:59:16,179 | INFO     | architecture information:
[2025-06-04 11:38:51] 2025-06-04 06:59:16,195 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:38:51] 2025-06-04 06:59:16,364 | INFO     | cat /etc/os-release:
[2025-06-04 11:38:51] NAME="CentOS Linux"
[2025-06-04 11:38:51] VERSION="7 (Core)"
[2025-06-04 11:38:51] ID="centos"
[2025-06-04 11:38:51] ID_LIKE="rhel fedora"
[2025-06-04 11:38:51] VERSION_ID="7"
[2025-06-04 11:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:38:51] ANSI_COLOR="0;31"
[2025-06-04 11:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:38:51] HOME_URL="https://www.centos.org/"
[2025-06-04 11:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:38:51] 
[2025-06-04 11:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:38:51] 
[2025-06-04 11:38:51] 2025-06-04 06:59:16,365 | INFO     | **************************************
[2025-06-04 11:38:51] 2025-06-04 06:59:16,722 | INFO     | PID=366 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 11:38:51] 2025-06-04 06:59:16,722 | INFO     | .. there are 9 such processes running
[2025-06-04 11:38:51] 2025-06-04 06:59:16,868 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 11:38:51] 2025-06-04 06:59:17,109 | INFO     | sufficient remaining disk space (496452501504 B)
[2025-06-04 11:38:51] 2025-06-04 06:59:17,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:38:51] 2025-06-04 06:59:17,110 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:38:51] 2025-06-04 06:59:17,110 | INFO     | update_server=False
[2025-06-04 11:38:51] 2025-06-04 06:59:17,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:38:51] 2025-06-04 06:59:17,115 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:38:51] 2025-06-04 06:59:17,115 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:38:51] 2025-06-04 06:59:17,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:38:51] 2025-06-04 06:59:17,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:38:51] 2025-06-04 06:59:17,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:38:51] 2025-06-04 06:59:17,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:51] 2025-06-04 06:59:17,123 | INFO     | aborting loop
[2025-06-04 11:38:51] 2025-06-04 06:59:17,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:38:51] 2025-06-04 06:59:17,399 | INFO     | all payload control threads have been joined
[2025-06-04 11:38:51] 2025-06-04 06:59:17,495 | INFO     | all data control threads have been joined
[2025-06-04 11:38:51] 2025-06-04 06:59:17,822 | INFO     | all job control threads have been joined
[2025-06-04 11:38:51] 2025-06-04 06:59:18,116 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,129 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,139 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,366 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,405 | INFO     | [payload] control thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,501 | INFO     | [data] control thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,566 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,566 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:51] 2025-06-04 06:59:18,715 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,721 | INFO     | [job] validate thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:18,828 | INFO     | [job] control thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:19,130 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:19,228 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:19,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:19,647 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:21,127 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:38:51] 2025-06-04 06:59:22,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688374363968)>', '<ExcThread(monitor, started 139688056690432)>']
[2025-06-04 11:38:51] 2025-06-04 06:59:23,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:38:51] 2025-06-04 06:59:23,157 | INFO     | [monitor] control thread has ended
[2025-06-04 11:38:51] 2025-06-04 06:59:27,938 | INFO     | all workflow threads have been joined
[2025-06-04 11:38:51] 2025-06-04 06:59:27,938 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:38:51] 2025-06-04 06:59:27,938 | INFO     | traces error code: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:27,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:38:51] 2025-06-04 06:59:28,320 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:38:51] 2025-06-04 06:59:28,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:38:51] 2025-06-04 06:59:28,523 [wrapper] pilotpid: 366
[2025-06-04 11:38:51] 2025-06-04 06:59:28,620 [wrapper] Pilot exit status: 0
[2025-06-04 11:38:51] 2025-06-04 06:59:29,109 [wrapper] pandaids: 6677660694
[2025-06-04 11:38:51] 2025-06-04 06:59:30,021 [wrapper] cleanup supervisor_pilot  2017 367
[2025-06-04 11:38:51] 2025-06-04 06:59:30,147 [wrapper] Test setup, not cleaning
[2025-06-04 11:38:51] 2025-06-04 06:59:30,264 [wrapper] apfmon messages muted
[2025-06-04 11:38:51] 2025-06-04 06:59:30,309 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:38:51] 2025-06-04 06:59:30,394 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:38:51]  *** Error codes and diagnostics ***
[2025-06-04 11:38:51]     "exeErrorCode": 0,
[2025-06-04 11:38:51]     "exeErrorDiag": "",
[2025-06-04 11:38:51]     "pilotErrorCode": 0,
[2025-06-04 11:38:51]     "pilotErrorDiag": "",
[2025-06-04 11:38:51]  *** Listing of results directory ***
[2025-06-04 11:38:51] total 389096
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:31 queuedata.json
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-04 11:38:51] -rwx------. 1 boinc boinc     37140 Jun  3 16:32 runpilot2-wrapper.sh
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:38:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:13 run_atlas
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:13 job.xml
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc      6392 Jun  4 05:13 init_data.xml
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc 215555648 Jun  4 05:13 EVNT.45006593._001432.pool.root.1
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:13 start_atlas.sh
[2025-06-04 11:38:51] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:13 shared
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc    508878 Jun  4 05:13 input.tar.gz
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:13 boinc_lockfile
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:23 pandaJob.out
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc    986077 Jun  4 05:26 agis_schedconf.cvmfs.json
[2025-06-04 11:38:51] drwx------. 4 boinc boinc      4096 Jun  4 05:26 pilot3
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc 176089944 Jun  4 08:56 HITS.45006595._035635.pool.root.1
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc       530 Jun  4 08:56 boinc_task_state.xml
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc      1015 Jun  4 08:57 memory_monitor_summary.json
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc   1603667 Jun  4 08:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc    382443 Jun  4 08:57 log.45006595._035635.job.log.tgz.1
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc        95 Jun  4 08:58 pilot_heartbeat.json
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc      7689 Jun  4 08:59 heartbeat.json
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc      4929 Jun  4 08:59 pilotlog.txt
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc   1099609 Jun  4 08:59 log.45006595._035635.job.log.1
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc       357 Jun  4 08:59 output.list
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc       620 Jun  4 08:59 runtime_log
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc   1505280 Jun  4 08:59 result.tar.gz
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc      8659 Jun  4 08:59 runtime_log.err
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc       657 Jun  4 08:59 dubNDm2rhg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0xYKDmdVhihm.diag
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:38 boinc_mmap_file
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:38 wrapper_checkpoint.txt
[2025-06-04 11:38:51] -rw-r--r--. 1 boinc boinc     20600 Jun  4 11:38 stderr.txt
[2025-06-04 11:38:51] HITS file was successfully produced:
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc 176089944 Jun  4 08:56 shared/HITS.pool.root.1
[2025-06-04 11:38:51]  *** Contents of shared directory: ***
[2025-06-04 11:38:51] total 384456
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc 215555648 Jun  4 05:13 ATLAS.root_0
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:13 start_atlas.sh
[2025-06-04 11:38:51] -rw-r--r--. 2 boinc boinc    508878 Jun  4 05:13 input.tar.gz
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc 176089944 Jun  4 08:56 HITS.pool.root.1
[2025-06-04 11:38:51] -rw-------. 1 boinc boinc   1505280 Jun  4 08:59 result.tar.gz
11:38:53 (25986): run_atlas exited; CPU time 45158.016976
11:38:53 (25986): called boinc_finish(0)

</stderr_txt>
]]>

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