Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:08:51 (716741): wrapper (7.7.26015): starting
13:08:51 (716741): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:08:51] Arguments: --nthreads 8
[2025-06-03 13:08:51] Threads: 8
[2025-06-03 13:08:51] Checking for CVMFS
[2025-06-03 13:08:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:08:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:08:52] 2.12.6.0 3733875 171363 396180 146749 0 187 23610525 32935936 3416 130560 1 380837950 99.638 384266293 25463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:08:52] CVMFS is ok
[2025-06-03 13:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:08:52] Further information can be found at the LHC@home message board.
[2025-06-03 13:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:08:52] Checking for apptainer binary...
[2025-06-03 13:08:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:08:52] Running /usr/bin/apptainer --version
[2025-06-03 13:08:52] apptainer version 1.4.1-1.el9
[2025-06-03 13:08:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:08:52] c-6-2.aglt2.org
[2025-06-03 13:08:52] apptainer works
[2025-06-03 13:08:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:08:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:08:52] Starting ATLAS job with PandaID=6677660586
[2025-06-03 13:08:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:46:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:46:25] 2025-06-03 19:45:54,848 | INFO     | -- intersect: -18202930976.54629
[2025-06-03 17:46:25] 2025-06-03 19:45:54,848 | INFO     | intersect: -18202930976.54629
[2025-06-03 17:46:25] 2025-06-03 19:45:54,848 | INFO     | chi2: 5.213709944293299
[2025-06-03 17:46:25] 2025-06-03 19:45:54,848 | INFO     | sum of square deviations: 1025903564.3087271
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | sum of deviations: 29728272344.241592
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | mean x: 1748975081.2550335
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | mean y: 2051271.677852349
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | -- intersect: -50679132952.37369
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | intersect: -50679132952.37369
[2025-06-03 17:46:25] 2025-06-03 19:45:54,855 | INFO     | chi2: 3.8589015559205424
[2025-06-03 17:46:25] 2025-06-03 19:45:54,856 | INFO     | current chi2=3.8589015559205424 (change=25.985495987471865 %)
[2025-06-03 17:46:25] 2025-06-03 19:45:54,856 | INFO     | sum of square deviations: 926080723.97222
[2025-06-03 17:46:25] 2025-06-03 19:45:54,857 | INFO     | sum of deviations: 33200997296.73609
[2025-06-03 17:46:25] 2025-06-03 19:45:54,857 | INFO     | mean x: 1748974928.7638888
[2025-06-03 17:46:25] 2025-06-03 19:45:54,857 | INFO     | mean y: 2056574.2569444445
[2025-06-03 17:46:25] 2025-06-03 19:45:54,857 | INFO     | -- intersect: -62700589511.367615
[2025-06-03 17:46:25] 2025-06-03 19:45:54,857 | INFO     | intersect: -62700589511.367615
[2025-06-03 17:46:25] 2025-06-03 19:45:54,885 | INFO     | chi2: 3.7940403874583635
[2025-06-03 17:46:25] 2025-06-03 19:45:54,888 | INFO     | current chi2=3.7940403874583635 (change=1.680819464354184 %)
[2025-06-03 17:46:25] 2025-06-03 19:45:54,888 | INFO     | right removable region: 143
[2025-06-03 17:46:25] 2025-06-03 19:45:54,888 | INFO     | sum of square deviations: 1025889412.7919439
[2025-06-03 17:46:25] 2025-06-03 19:45:54,921 | INFO     | sum of deviations: -19125390607.825497
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | mean x: 1748975386.261745
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | mean y: 2070013.3288590603
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | -- intersect: 32607765138.59102
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | intersect: 32607765138.59102
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | chi2: 2.6585575997390904
[2025-06-03 17:46:25] 2025-06-03 19:45:54,922 | INFO     | current chi2=2.6585575997390904 (change=49.008333257030685 %)
[2025-06-03 17:46:25] 2025-06-03 19:45:54,923 | INFO     | sum of square deviations: 926043087.4375019
[2025-06-03 17:46:25] 2025-06-03 19:45:54,923 | INFO     | sum of deviations: -38134145771.375
[2025-06-03 17:46:25] 2025-06-03 19:45:54,923 | INFO     | mean x: 1748975538.7708333
[2025-06-03 17:46:25] 2025-06-03 19:45:54,923 | INFO     | mean y: 2098910.2916666665
[2025-06-03 17:46:25] 2025-06-03 19:45:54,924 | INFO     | -- intersect: 72024328816.0436
[2025-06-03 17:46:25] 2025-06-03 19:45:54,924 | INFO     | intersect: 72024328816.0436
[2025-06-03 17:46:25] 2025-06-03 19:45:54,924 | INFO     | chi2: 1.5976165621772824
[2025-06-03 17:46:25] 2025-06-03 19:45:54,924 | INFO     | current chi2=1.5976165621772824 (change=39.90664101714134 %)
[2025-06-03 17:46:25] 2025-06-03 19:45:54,924 | INFO     | sum of square deviations: 832894562.0575514
[2025-06-03 17:46:25] 2025-06-03 19:45:55,083 | INFO     | sum of deviations: -39247215375.36691
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | mean x: 1748975691.2805755
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | mean y: 2100649.0863309354
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | -- intersect: 82416404654.62373
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | intersect: 82416404654.62373
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | chi2: 1.538628429580627
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | current chi2=1.538628429580627 (change=3.692258455074137 %)
[2025-06-03 17:46:25] 2025-06-03 19:45:55,084 | INFO     | left removable region: 30
[2025-06-03 17:46:25] 2025-06-03 19:45:55,085 | INFO     | sum of square deviations: 447537551.2212397
[2025-06-03 17:46:25] 2025-06-03 19:45:55,085 | INFO     | sum of deviations: -14578920014.0708
[2025-06-03 17:46:25] 2025-06-03 19:45:55,085 | INFO     | mean x: 1748975813.3362832
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | mean y: 2136732.2123893807
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | -- intersect: 56976525628.95348
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | intersect: 56976525628.95348
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | chi2: 0.11477196209128188
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | -- intersect: 56976525628.95348
[2025-06-03 17:46:25] 2025-06-03 19:45:55,086 | INFO     | current memory leak: -32.58 B/s (using 113 data points, chi2=0.11)
[2025-06-03 17:46:25] 2025-06-03 19:45:55,156 | INFO     | ..............................
[2025-06-03 17:46:25] 2025-06-03 19:45:55,156 | INFO     | . Timing measurements:
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . get job = 0 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . initial setup = 2 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . payload setup = 6 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . stage-in = 0 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . payload execution = 9340 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . stage-out = 3 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,161 | INFO     | . log creation = 0 s
[2025-06-03 17:46:25] 2025-06-03 19:45:55,162 | INFO     | ..............................
[2025-06-03 17:46:25] 2025-06-03 19:45:55,194 | INFO     | monitor loop #651: job 0:6677660586 is in state 'finished'
[2025-06-03 17:46:25] 2025-06-03 19:45:55,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:46:25] 2025-06-03 19:45:56,248 | INFO     | 
[2025-06-03 17:46:25] 2025-06-03 19:45:56,248 | INFO     | job summary report
[2025-06-03 17:46:25] 2025-06-03 19:45:56,248 | INFO     | --------------------------------------------------
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | PanDA job id: 6677660586
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | task id: 45006595
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | errors: (none)
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | pilot state: finished 
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | transexitcode: 0
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | exeerrorcode: 0
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | exeerrordiag: 
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | exitcode: 0
[2025-06-03 17:46:25] 2025-06-03 19:45:56,249 | INFO     | exitmsg: OK
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | cpuconsumptiontime: 39550 s
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | nevents: 400
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | neventsw: 0
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | pid: 727364
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | pgrp: 727364
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | corecount: 8
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | event service: False
[2025-06-03 17:46:25] 2025-06-03 19:45:56,250 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 9352: 2433722, 9353: 2433721, 9358: 2442902, 9400: 2443016}
[2025-06-03 17:46:25] 2025-06-03 19:45:56,259 | INFO     | --------------------------------------------------
[2025-06-03 17:46:25] 2025-06-03 19:45:56,259 | INFO     | 
[2025-06-03 17:46:25] 2025-06-03 19:45:56,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 17:46:25] 2025-06-03 19:45:56,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:46:25] 2025-06-03 19:45:56,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:46:25] 2025-06-03 19:45:56,348 | INFO     | job 6677660586 has completed (purged errors)
[2025-06-03 17:46:25] 2025-06-03 19:45:56,348 | INFO     | overall cleanup function is called
[2025-06-03 17:46:25] 2025-06-03 19:45:57,362 | INFO     | --- collectZombieJob: --- 10, [727364]
[2025-06-03 17:46:25] 2025-06-03 19:45:57,362 | INFO     | zombie collector waiting for pid 727364
[2025-06-03 17:46:25] 2025-06-03 19:45:57,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:46:25] 2025-06-03 19:45:57,362 | INFO     | collected zombie processes
[2025-06-03 17:46:25] 2025-06-03 19:45:57,362 | INFO     | will attempt to kill all subprocesses of pid=727364
[2025-06-03 17:46:25] 2025-06-03 19:45:59,480 | INFO     | process IDs to be killed: [727364] (in reverse order)
[2025-06-03 17:46:25] 2025-06-03 19:45:59,738 | INFO     | PID=720357 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 17:46:25] 2025-06-03 19:45:59,738 | INFO     | .. there are 32 such processes running
[2025-06-03 17:46:25] 2025-06-03 19:46:00,026 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:46:25] 2025-06-03 19:46:00,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:46:25] 2025-06-03 19:46:00,079 | INFO     | did not find any defunct processes belonging to 727364
[2025-06-03 17:46:25] 2025-06-03 19:46:00,132 | INFO     | did not find any defunct processes belonging to 727364
[2025-06-03 17:46:25] 2025-06-03 19:46:00,132 | INFO     | ready for new job
[2025-06-03 17:46:25] 2025-06-03 19:46:00,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:46:25] 2025-06-03 19:46:00,134 | INFO     | **************************************
[2025-06-03 17:46:25] 2025-06-03 19:46:00,135 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:46:25] 2025-06-03 19:46:00,135 | INFO     | **************************************
[2025-06-03 17:46:25] 2025-06-03 19:46:00,135 | INFO     | 
[2025-06-03 17:46:25] 2025-06-03 19:46:00,137 | INFO     | architecture information:
[2025-06-03 17:46:25] 2025-06-03 19:46:00,137 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:46:25] 2025-06-03 19:46:00,179 | INFO     | cat /etc/os-release:
[2025-06-03 17:46:25] NAME="CentOS Linux"
[2025-06-03 17:46:25] VERSION="7 (Core)"
[2025-06-03 17:46:25] ID="centos"
[2025-06-03 17:46:25] ID_LIKE="rhel fedora"
[2025-06-03 17:46:25] VERSION_ID="7"
[2025-06-03 17:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:46:25] ANSI_COLOR="0;31"
[2025-06-03 17:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:46:25] HOME_URL="https://www.centos.org/"
[2025-06-03 17:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:46:25] 
[2025-06-03 17:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:46:25] 
[2025-06-03 17:46:25] 2025-06-03 19:46:00,179 | INFO     | **************************************
[2025-06-03 17:46:25] 2025-06-03 19:46:00,683 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 17:46:25] 2025-06-03 19:46:00,929 | INFO     | sufficient remaining disk space (74314678272 B)
[2025-06-03 17:46:25] 2025-06-03 19:46:00,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:46:25] 2025-06-03 19:46:00,930 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:46:25] 2025-06-03 19:46:00,930 | INFO     | update_server=False
[2025-06-03 17:46:25] 2025-06-03 19:46:00,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:46:25] 2025-06-03 19:46:01,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:46:25] 2025-06-03 19:46:01,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:46:25] 2025-06-03 19:46:01,280 | INFO     | aborting loop
[2025-06-03 17:46:25] 2025-06-03 19:46:01,296 | INFO     | all data control threads have been joined
[2025-06-03 17:46:25] 2025-06-03 19:46:01,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:46:25] 2025-06-03 19:46:01,389 | INFO     | all job control threads have been joined
[2025-06-03 17:46:25] 2025-06-03 19:46:01,489 | INFO     | all payload control threads have been joined
[2025-06-03 17:46:25] 2025-06-03 19:46:01,837 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:46:25] 2025-06-03 19:46:01,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:46:25] 2025-06-03 19:46:01,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:46:25] 2025-06-03 19:46:01,936 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:01,944 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:01,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,087 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,092 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,286 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,299 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,302 | INFO     | [data] control thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,311 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,326 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:46:25] 2025-06-03 19:46:02,422 | INFO     | [job] control thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,520 | INFO     | [payload] control thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:02,857 | INFO     | [job] validate thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:03,306 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:04,363 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:05,207 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:46:25] 2025-06-03 19:46:05,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562512934720)>', '<ExcThread(monitor, started 140561864455936)>']
[2025-06-03 17:46:25] 2025-06-03 19:46:05,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:46:25] 2025-06-03 19:46:05,885 | INFO     | [monitor] control thread has ended
[2025-06-03 17:46:25] 2025-06-03 19:46:10,836 | INFO     | all workflow threads have been joined
[2025-06-03 17:46:25] 2025-06-03 19:46:10,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:46:25] 2025-06-03 19:46:10,840 | INFO     | traces error code: 0
[2025-06-03 17:46:25] 2025-06-03 19:46:10,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:46:25] 2025-06-03 19:46:11,955 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:46:25] 2025-06-03 19:46:11,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:46:25] 2025-06-03 19:46:11,967 [wrapper] pilotpid: 720357
[2025-06-03 17:46:25] 2025-06-03 19:46:11,969 [wrapper] Pilot exit status: 0
[2025-06-03 17:46:25] 2025-06-03 19:46:12,053 [wrapper] pandaids: 6677660586
[2025-06-03 17:46:25] 2025-06-03 19:46:12,205 [wrapper] cleanup supervisor_pilot 2186686 720358
[2025-06-03 17:46:25] 2025-06-03 19:46:12,220 [wrapper] Test setup, not cleaning
[2025-06-03 17:46:25] 2025-06-03 19:46:12,239 [wrapper] apfmon messages muted
[2025-06-03 17:46:25] 2025-06-03 19:46:12,254 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:46:25] 2025-06-03 19:46:12,272 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:46:25]  *** Error codes and diagnostics ***
[2025-06-03 17:46:25]     "exeErrorCode": 0,
[2025-06-03 17:46:25]     "exeErrorDiag": "",
[2025-06-03 17:46:25]     "pilotErrorCode": 0,
[2025-06-03 17:46:25]     "pilotErrorDiag": "",
[2025-06-03 17:46:25]  *** Listing of results directory ***
[2025-06-03 17:46:25] total 386284
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:09 pilot3.tar.gz
[2025-06-03 17:46:25] -rwx------. 1 boincer umatlas     37140 Jun  3 10:27 runpilot2-wrapper.sh
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:27 queuedata.json
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:46:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:08 run_atlas
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:08 job.xml
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas 215357389 Jun  3 13:08 EVNT.45006593._001428.pool.root.1
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:08 start_atlas.sh
[2025-06-03 17:46:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:08 shared
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 13:08 input.tar.gz
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:08 boinc_lockfile
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:08 pandaJob.out
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas    983734 Jun  3 13:08 agis_schedconf.cvmfs.json
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:46:25] drwx------. 4 boincer umatlas      4096 Jun  3 13:09 pilot3
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas 173977647 Jun  3 15:43 HITS.45006595._035527.pool.root.1
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:43 boinc_task_state.xml
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas      1037 Jun  3 15:45 memory_monitor_summary.json
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas        95 Jun  3 15:45 pilot_heartbeat.json
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas    348343 Jun  3 15:45 log.45006595._035527.job.log.tgz.1
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas      7710 Jun  3 15:45 heartbeat.json
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas      4353 Jun  3 15:46 pilotlog.txt
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas    840416 Jun  3 15:46 log.45006595._035527.job.log.1
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas       357 Jun  3 15:46 output.list
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:46 runtime_log
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas   1208320 Jun  3 15:46 result.tar.gz
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas       650 Jun  3 15:46 VPwMDmRnhg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnuYKDm3uixGn.diag
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 15:46 runtime_log.err
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas      6656 Jun  3 17:46 init_data.xml
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:46 boinc_mmap_file
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas     20986 Jun  3 17:46 stderr.txt
[2025-06-03 17:46:25] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:46 wrapper_checkpoint.txt
[2025-06-03 17:46:25] HITS file was successfully produced:
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas 173977647 Jun  3 15:43 shared/HITS.pool.root.1
[2025-06-03 17:46:25]  *** Contents of shared directory: ***
[2025-06-03 17:46:25] total 381920
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas 215357389 Jun  3 13:08 ATLAS.root_0
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:08 start_atlas.sh
[2025-06-03 17:46:25] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 13:08 input.tar.gz
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas 173977647 Jun  3 15:43 HITS.pool.root.1
[2025-06-03 17:46:25] -rw-------. 1 boincer umatlas   1208320 Jun  3 15:46 result.tar.gz
17:46:27 (716741): run_atlas exited; CPU time 39877.991872
17:46:27 (716741): called boinc_finish(0)

</stderr_txt>
]]>

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