Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:30:17 (3188): wrapper (7.7.26015): starting
03:30:17 (3188): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:30:17] Arguments: --nthreads 8
[2025-06-04 03:30:17] Threads: 8
[2025-06-04 03:30:17] Checking for CVMFS
[2025-06-04 03:30:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:30:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:30:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:30:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:30:20] 2.11.2.0 17186 32716 103320 146762 3 59 18259255 25165825 3521 130560 0 17496941 99.853 18844153 2058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:30:20] CVMFS is ok
[2025-06-04 03:30:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:30:20] Checking for apptainer binary...
[2025-06-04 03:30:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:30:20] Running /usr/bin/apptainer --version
[2025-06-04 03:30:20] apptainer version 1.3.2-1.el7
[2025-06-04 03:30:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:30:26] cg-vwn311.simple-grid.lan
[2025-06-04 03:30:26] apptainer works
[2025-06-04 03:30:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:30:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:30:27] Starting ATLAS job with PandaID=6677658249
[2025-06-04 03:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:31:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:31:54] 2025-06-04 05:26:22,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:31:54] 2025-06-04 05:26:22,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:31:54] 2025-06-04 05:26:22,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:31:54] 2025-06-04 05:26:22,277 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:31:54] 2025-06-04 05:26:22,278 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,279 | INFO     | sum of deviations: 94407516870.99997
[2025-06-04 07:31:54] 2025-06-04 05:26:22,280 | INFO     | mean x: 1749007991.5
[2025-06-04 07:31:54] 2025-06-04 05:26:22,280 | INFO     | mean y: 2420884.3636363638
[2025-06-04 07:31:54] 2025-06-04 05:26:22,280 | INFO     | -- intersect: -50008042126.90625
[2025-06-04 07:31:54] 2025-06-04 05:26:22,280 | INFO     | intersect: -50008042126.90625
[2025-06-04 07:31:54] 2025-06-04 05:26:22,280 | INFO     | chi2: 6.704014348770458
[2025-06-04 07:31:54] 2025-06-04 05:26:22,281 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,282 | INFO     | sum of deviations: 106574291329.99998
[2025-06-04 07:31:54] 2025-06-04 05:26:22,283 | INFO     | mean x: 1749007839.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,290 | INFO     | mean y: 2429131.074418605
[2025-06-04 07:31:54] 2025-06-04 05:26:22,290 | INFO     | -- intersect: -60484258320.65155
[2025-06-04 07:31:54] 2025-06-04 05:26:22,290 | INFO     | intersect: -60484258320.65155
[2025-06-04 07:31:54] 2025-06-04 05:26:22,291 | INFO     | chi2: 5.984855741897449
[2025-06-04 07:31:54] 2025-06-04 05:26:22,291 | INFO     | current chi2=5.984855741897449 (change=10.727283228516738 %)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,291 | INFO     | right removable region: 214
[2025-06-04 07:31:54] 2025-06-04 05:26:22,292 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,293 | INFO     | sum of deviations: 20556665536.999992
[2025-06-04 07:31:54] 2025-06-04 05:26:22,293 | INFO     | mean x: 1749008144.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,293 | INFO     | mean y: 2472014.469767442
[2025-06-04 07:31:54] 2025-06-04 05:26:22,293 | INFO     | -- intersect: -11664552037.012394
[2025-06-04 07:31:54] 2025-06-04 05:26:22,294 | INFO     | intersect: -11664552037.012394
[2025-06-04 07:31:54] 2025-06-04 05:26:22,294 | INFO     | chi2: 2.117960178147448
[2025-06-04 07:31:54] 2025-06-04 05:26:22,294 | INFO     | current chi2=2.117960178147448 (change=68.40758286062007 %)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,295 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 07:31:54] 2025-06-04 05:26:22,296 | INFO     | sum of deviations: -15512501208.499998
[2025-06-04 07:31:54] 2025-06-04 05:26:22,296 | INFO     | mean x: 1749008296.5
[2025-06-04 07:31:54] 2025-06-04 05:26:22,296 | INFO     | mean y: 2498045.3952380954
[2025-06-04 07:31:54] 2025-06-04 05:26:22,296 | INFO     | -- intersect: 9450658014.26698
[2025-06-04 07:31:54] 2025-06-04 05:26:22,297 | INFO     | intersect: 9450658014.26698
[2025-06-04 07:31:54] 2025-06-04 05:26:22,297 | INFO     | chi2: 0.8757031071108413
[2025-06-04 07:31:54] 2025-06-04 05:26:22,297 | INFO     | current chi2=0.8757031071108413 (change=58.65346685239346 %)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,297 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,299 | INFO     | sum of deviations: -23593232300.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,299 | INFO     | mean x: 1749008449.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,299 | INFO     | mean y: 2504172.1073170733
[2025-06-04 07:31:54] 2025-06-04 05:26:22,299 | INFO     | -- intersect: 15449700931.463215
[2025-06-04 07:31:54] 2025-06-04 05:26:22,299 | INFO     | intersect: 15449700931.463215
[2025-06-04 07:31:54] 2025-06-04 05:26:22,300 | INFO     | chi2: 0.8043817875070367
[2025-06-04 07:31:54] 2025-06-04 05:26:22,300 | INFO     | current chi2=0.8043817875070367 (change=8.144463463092084 %)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,300 | INFO     | left removable region: 30
[2025-06-04 07:31:54] 2025-06-04 05:26:22,300 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | sum of deviations: -8232103659.000002
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | mean x: 1749008723.5
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | mean y: 2513891.032608696
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | -- intersect: 7456416961.240084
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | intersect: 7456416961.240084
[2025-06-04 07:31:54] 2025-06-04 05:26:22,302 | INFO     | chi2: 0.013086449899471424
[2025-06-04 07:31:54] 2025-06-04 05:26:22,303 | INFO     | -- intersect: 7456416961.240084
[2025-06-04 07:31:54] 2025-06-04 05:26:22,303 | INFO     | current memory leak: -4.26 B/s (using 184 data points, chi2=0.01)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | ..............................
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . Timing measurements:
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . get job = 0 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . initial setup = 8 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . payload setup = 166 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . stage-in = 0 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . payload execution = 13515 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . stage-out = 4 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | . log creation = 1 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,304 | INFO     | ..............................
[2025-06-04 07:31:54] 2025-06-04 05:26:22,720 | INFO     | 
[2025-06-04 07:31:54] 2025-06-04 05:26:22,720 | INFO     | job summary report
[2025-06-04 07:31:54] 2025-06-04 05:26:22,720 | INFO     | --------------------------------------------------
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | PanDA job id: 6677658249
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | task id: 45006595
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | errors: (none)
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | pilot state: finished 
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | transexitcode: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | exeerrorcode: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | exeerrordiag: 
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | exitcode: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | exitmsg: OK
[2025-06-04 07:31:54] 2025-06-04 05:26:22,721 | INFO     | cpuconsumptiontime: 50119 s
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | nevents: 400
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | neventsw: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | pid: 13636
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | pgrp: 13636
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | corecount: 8
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | event service: False
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | sizes: {0: 2404356, 1: 2405212, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 88: 2405620, 96: 2406134, 98
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | --------------------------------------------------
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | 
[2025-06-04 07:31:54] 2025-06-04 05:26:22,722 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 07:31:54] 2025-06-04 05:26:23,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:31:54] 2025-06-04 05:26:23,112 | INFO     | job 6677658249 has completed (purged errors)
[2025-06-04 07:31:54] 2025-06-04 05:26:23,113 | INFO     | overall cleanup function is called
[2025-06-04 07:31:54] 2025-06-04 05:26:24,123 | INFO     | --- collectZombieJob: --- 10, [13636]
[2025-06-04 07:31:54] 2025-06-04 05:26:24,123 | INFO     | zombie collector waiting for pid 13636
[2025-06-04 07:31:54] 2025-06-04 05:26:24,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:31:54] 2025-06-04 05:26:24,124 | INFO     | collected zombie processes
[2025-06-04 07:31:54] 2025-06-04 05:26:24,124 | INFO     | will attempt to kill all subprocesses of pid=13636
[2025-06-04 07:31:54] 2025-06-04 05:26:24,228 | INFO     | process IDs to be killed: [13636] (in reverse order)
[2025-06-04 07:31:54] 2025-06-04 05:26:25,172 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:31:54] 2025-06-04 05:26:25,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:31:54] 2025-06-04 05:26:25,176 | INFO     | did not find any defunct processes belonging to 13636
[2025-06-04 07:31:54] 2025-06-04 05:26:25,179 | INFO     | did not find any defunct processes belonging to 13636
[2025-06-04 07:31:54] 2025-06-04 05:26:25,184 | INFO     | ready for new job
[2025-06-04 07:31:54] 2025-06-04 05:26:25,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:31:54] 2025-06-04 05:26:25,187 | INFO     | **************************************
[2025-06-04 07:31:54] 2025-06-04 05:26:25,187 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:31:54] 2025-06-04 05:26:25,187 | INFO     | **************************************
[2025-06-04 07:31:54] 2025-06-04 05:26:25,187 | INFO     | 
[2025-06-04 07:31:54] 2025-06-04 05:26:25,188 | INFO     | pilot is running in a VM
[2025-06-04 07:31:54] 2025-06-04 05:26:25,188 | INFO     | architecture information:
[2025-06-04 07:31:54] 2025-06-04 05:26:25,194 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:31:54] 2025-06-04 05:26:25,426 | INFO     | cat /etc/os-release:
[2025-06-04 07:31:54] NAME="CentOS Linux"
[2025-06-04 07:31:54] VERSION="7 (Core)"
[2025-06-04 07:31:54] ID="centos"
[2025-06-04 07:31:54] ID_LIKE="rhel fedora"
[2025-06-04 07:31:54] VERSION_ID="7"
[2025-06-04 07:31:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:31:54] ANSI_COLOR="0;31"
[2025-06-04 07:31:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:31:54] HOME_URL="https://www.centos.org/"
[2025-06-04 07:31:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:31:54] 
[2025-06-04 07:31:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:31:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:31:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:31:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:31:54] 
[2025-06-04 07:31:54] 2025-06-04 05:26:25,426 | INFO     | **************************************
[2025-06-04 07:31:54] 2025-06-04 05:26:25,928 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 07:31:54] 2025-06-04 05:26:26,185 | INFO     | sufficient remaining disk space (496896049152 B)
[2025-06-04 07:31:54] 2025-06-04 05:26:26,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:31:54] 2025-06-04 05:26:26,185 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:31:54] 2025-06-04 05:26:26,185 | INFO     | update_server=False
[2025-06-04 07:31:54] 2025-06-04 05:26:26,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:31:54] 2025-06-04 05:26:26,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:31:54] 2025-06-04 05:26:26,200 | INFO     | all data control threads have been joined
[2025-06-04 07:31:54] 2025-06-04 05:26:26,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:31:54] 2025-06-04 05:26:26,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:31:54] 2025-06-04 05:26:26,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:31:54] 2025-06-04 05:26:26,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:31:54] 2025-06-04 05:26:26,495 | INFO     | will abort loop
[2025-06-04 07:31:54] 2025-06-04 05:26:27,021 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:31:54] 2025-06-04 05:26:27,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:31:54] 2025-06-04 05:26:27,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:31:54] 2025-06-04 05:26:27,191 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,206 | INFO     | [data] control thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,372 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,492 | INFO     | all payload control threads have been joined
[2025-06-04 07:31:54] 2025-06-04 05:26:27,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:31:54] 2025-06-04 05:26:27,500 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,715 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,747 | INFO     | all job control threads have been joined
[2025-06-04 07:31:54] 2025-06-04 05:26:27,772 | INFO     | [job] validate thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:27,863 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,167 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,188 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,198 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,323 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,497 | INFO     | [payload] control thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,498 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:28,753 | INFO     | [job] control thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:30,300 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:36,528 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:31:54] 2025-06-04 05:26:37,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:31:54] 2025-06-04 05:26:39,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314236168000)>', '<ExcThread(monitor, started 140313788131072)>']
[2025-06-04 07:31:54] 2025-06-04 05:26:39,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:31:54] 2025-06-04 05:26:39,094 | INFO     | [monitor] control thread has ended
[2025-06-04 07:31:54] 2025-06-04 05:26:44,056 | INFO     | all workflow threads have been joined
[2025-06-04 07:31:54] 2025-06-04 05:26:44,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:31:54] 2025-06-04 05:26:44,057 | INFO     | traces error code: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:44,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:31:54] 2025-06-04 05:26:44,637 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:31:54] 2025-06-04 05:26:44,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:31:54] 2025-06-04 05:26:44,799 [wrapper] pilotpid: 7016
[2025-06-04 07:31:54] 2025-06-04 05:26:44,909 [wrapper] Pilot exit status: 0
[2025-06-04 07:31:54] 2025-06-04 05:26:45,314 [wrapper] pandaids: 6677658249
[2025-06-04 07:31:54] 2025-06-04 05:26:45,867 [wrapper] cleanup supervisor_pilot 24167 7017
[2025-06-04 07:31:54] 2025-06-04 05:26:45,967 [wrapper] Test setup, not cleaning
[2025-06-04 07:31:54] 2025-06-04 05:26:46,072 [wrapper] apfmon messages muted
[2025-06-04 07:31:54] 2025-06-04 05:26:46,168 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:31:54] 2025-06-04 05:26:46,287 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:31:54]  *** Error codes and diagnostics ***
[2025-06-04 07:31:54]     "exeErrorCode": 0,
[2025-06-04 07:31:54]     "exeErrorDiag": "",
[2025-06-04 07:31:54]     "pilotErrorCode": 0,
[2025-06-04 07:31:54]     "pilotErrorDiag": "",
[2025-06-04 07:31:54]  *** Listing of results directory ***
[2025-06-04 07:31:54] total 393184
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:18 queuedata.json
[2025-06-04 07:31:54] -rwx------. 1 boinc boinc     37140 Jun  3 16:18 runpilot2-wrapper.sh
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:31:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:30 run_atlas
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:30 job.xml
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc 217336721 Jun  4 03:30 EVNT.45006593._001409.pool.root.1
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc    508878 Jun  4 03:30 input.tar.gz
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc      6390 Jun  4 03:30 init_data.xml
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:30 start_atlas.sh
[2025-06-04 07:31:54] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:30 shared
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:30 boinc_lockfile
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc      2525 Jun  4 03:30 pandaJob.out
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc    986069 Jun  4 03:33 agis_schedconf.cvmfs.json
[2025-06-04 07:31:54] drwx------. 4 boinc boinc      4096 Jun  4 03:33 pilot3
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc 178347955 Jun  4 07:23 HITS.45006595._035047.pool.root.1
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc       531 Jun  4 07:23 boinc_task_state.xml
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc      1029 Jun  4 07:24 memory_monitor_summary.json
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc   1603667 Jun  4 07:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc    375598 Jun  4 07:24 log.45006595._035047.job.log.tgz.1
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc        95 Jun  4 07:25 pilot_heartbeat.json
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc      7690 Jun  4 07:26 heartbeat.json
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc      4674 Jun  4 07:26 pilotlog.txt
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc   1186327 Jun  4 07:26 log.45006595._035047.job.log.1
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc       357 Jun  4 07:26 output.list
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:26 runtime_log
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc   1576960 Jun  4 07:26 result.tar.gz
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc       657 Jun  4 07:26 uYtKDmKehg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCWkKDmATLG1m.diag
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc      8659 Jun  4 07:26 runtime_log.err
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:31 boinc_mmap_file
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:31 wrapper_checkpoint.txt
[2025-06-04 07:31:54] -rw-r--r--. 1 boinc boinc     20483 Jun  4 07:31 stderr.txt
[2025-06-04 07:31:54] HITS file was successfully produced:
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc 178347955 Jun  4 07:23 shared/HITS.pool.root.1
[2025-06-04 07:31:54]  *** Contents of shared directory: ***
[2025-06-04 07:31:54] total 388468
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc 217336721 Jun  4 03:30 ATLAS.root_0
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc    508878 Jun  4 03:30 input.tar.gz
[2025-06-04 07:31:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:30 start_atlas.sh
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc 178347955 Jun  4 07:23 HITS.pool.root.1
[2025-06-04 07:31:54] -rw-------. 1 boinc boinc   1576960 Jun  4 07:26 result.tar.gz
07:31:56 (3188): run_atlas exited; CPU time 50305.841686
07:31:56 (3188): called boinc_finish(0)

</stderr_txt>
]]>

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