Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:48:27 (14074): wrapper (7.7.26015): starting
09:48:27 (14074): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:48:27] Arguments: --nthreads 8
[2025-06-04 09:48:27] Threads: 8
[2025-06-04 09:48:27] Checking for CVMFS
[2025-06-04 09:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:48:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:48:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:48:29] 2.11.2.0 8404 33094 97124 146772 1 69 18575118 25165824 3907 130560 0 17223863 99.832 19000327 4306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:48:29] CVMFS is ok
[2025-06-04 09:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:48:29] Checking for apptainer binary...
[2025-06-04 09:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:48:29] Running /usr/bin/apptainer --version
[2025-06-04 09:48:29] apptainer version 1.3.2-1.el7
[2025-06-04 09:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:58:45] cg-vwn309.simple-grid.lan
[2025-06-04 09:58:45] apptainer works
[2025-06-04 09:58:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:58:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:58:45] Starting ATLAS job with PandaID=6677658256
[2025-06-04 09:58:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:10:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:10:49] 2025-06-04 11:59:24,901 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6677658256/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,902 | INFO     | extracted standard info from prmon json
[2025-06-04 15:10:49] 2025-06-04 11:59:24,902 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:10:49] 2025-06-04 11:59:24,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:10:49] 2025-06-04 11:59:24,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:10:49] 2025-06-04 11:59:24,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:10:49] 2025-06-04 11:59:24,908 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:10:49] 2025-06-04 11:59:24,911 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,913 | INFO     | sum of deviations: 89688873339.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,914 | INFO     | mean x: 1749031441.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,914 | INFO     | mean y: 2417700.9155555554
[2025-06-04 15:10:49] 2025-06-04 11:59:24,914 | INFO     | -- intersect: -44411469521.608574
[2025-06-04 15:10:49] 2025-06-04 11:59:24,914 | INFO     | intersect: -44411469521.608574
[2025-06-04 15:10:49] 2025-06-04 11:59:24,914 | INFO     | chi2: 5.69987989640186
[2025-06-04 15:10:49] 2025-06-04 11:59:24,915 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | sum of deviations: 102138895198.00002
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | mean x: 1749031288.5
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | mean y: 2425769.209090909
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | -- intersect: -54104298451.21535
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | intersect: -54104298451.21535
[2025-06-04 15:10:49] 2025-06-04 11:59:24,917 | INFO     | chi2: 4.9678345021107475
[2025-06-04 15:10:49] 2025-06-04 11:59:24,918 | INFO     | current chi2=4.9678345021107475 (change=12.843172270230257 %)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,918 | INFO     | right removable region: 219
[2025-06-04 15:10:49] 2025-06-04 11:59:24,918 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,920 | INFO     | sum of deviations: 15329634768.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,920 | INFO     | mean x: 1749031593.5
[2025-06-04 15:10:49] 2025-06-04 11:59:24,920 | INFO     | mean y: 2466887.0272727273
[2025-06-04 15:10:49] 2025-06-04 11:59:24,920 | INFO     | -- intersect: -8118205104.020598
[2025-06-04 15:10:49] 2025-06-04 11:59:24,920 | INFO     | intersect: -8118205104.020598
[2025-06-04 15:10:49] 2025-06-04 11:59:24,921 | INFO     | chi2: 1.350169774382504
[2025-06-04 15:10:49] 2025-06-04 11:59:24,921 | INFO     | current chi2=1.350169774382504 (change=76.31231185704772 %)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,921 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,923 | INFO     | sum of deviations: -6607199079.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,923 | INFO     | mean x: 1749031746.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,923 | INFO     | mean y: 2481945.28372093
[2025-06-04 15:10:49] 2025-06-04 11:59:24,923 | INFO     | -- intersect: 3752476839.6918087
[2025-06-04 15:10:49] 2025-06-04 11:59:24,923 | INFO     | intersect: 3752476839.6918087
[2025-06-04 15:10:49] 2025-06-04 11:59:24,924 | INFO     | chi2: 0.8046149149918896
[2025-06-04 15:10:49] 2025-06-04 11:59:24,924 | INFO     | current chi2=0.8046149149918896 (change=40.406389606827204 %)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,924 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 15:10:49] 2025-06-04 11:59:24,926 | INFO     | sum of deviations: -7102734927.5
[2025-06-04 15:10:49] 2025-06-04 11:59:24,926 | INFO     | mean x: 1749031898.5
[2025-06-04 15:10:49] 2025-06-04 11:59:24,926 | INFO     | mean y: 2482306.757142857
[2025-06-04 15:10:49] 2025-06-04 11:59:24,926 | INFO     | -- intersect: 4328585524.7804785
[2025-06-04 15:10:49] 2025-06-04 11:59:24,926 | INFO     | intersect: 4328585524.7804785
[2025-06-04 15:10:49] 2025-06-04 11:59:24,927 | INFO     | chi2: 0.7943819258005572
[2025-06-04 15:10:49] 2025-06-04 11:59:24,927 | INFO     | current chi2=0.7943819258005572 (change=1.2717871618668126 %)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,927 | INFO     | left removable region: 30
[2025-06-04 15:10:49] 2025-06-04 11:59:24,931 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,932 | INFO     | sum of deviations: 3097433051.0000005
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | mean x: 1749032173.0
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | mean y: 2495383.9417989417
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | -- intersect: -2585407938.089452
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | intersect: -2585407938.089452
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | chi2: 0.00010932183955308804
[2025-06-04 15:10:49] 2025-06-04 11:59:24,933 | INFO     | -- intersect: -2585407938.089452
[2025-06-04 15:10:49] 2025-06-04 11:59:24,934 | INFO     | current memory leak: 1.48 B/s (using 189 data points, chi2=0.00)
[2025-06-04 15:10:49] 2025-06-04 11:59:24,934 | INFO     | ..............................
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . Timing measurements:
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . get job = 0 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . initial setup = 8 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . payload setup = 147 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . stage-in = 0 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . payload execution = 13821 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . stage-out = 3 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | . log creation = 1 s
[2025-06-04 15:10:49] 2025-06-04 11:59:24,935 | INFO     | ..............................
[2025-06-04 15:10:49] 2025-06-04 11:59:25,071 | INFO     | 
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | job summary report
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | --------------------------------------------------
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | PanDA job id: 6677658256
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | task id: 45006595
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | errors: (none)
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | pilot state: finished 
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | transexitcode: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | exeerrorcode: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:25,072 | INFO     | exeerrordiag: 
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | exitcode: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | exitmsg: OK
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | cpuconsumptiontime: 50954 s
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | nevents: 400
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | neventsw: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | pid: 31840
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | pgrp: 31840
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | corecount: 8
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | event service: False
[2025-06-04 15:10:49] 2025-06-04 11:59:25,073 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 23: 2405241, 33: 2405269, 44: 2405325, 55: 2405481, 66: 2405509, 76: 2405537, 87: 2405799, 98: 2405827, 13972: 2435768
[2025-06-04 15:10:49] 2025-06-04 11:59:25,074 | INFO     | --------------------------------------------------
[2025-06-04 15:10:49] 2025-06-04 11:59:25,074 | INFO     | 
[2025-06-04 15:10:49] 2025-06-04 11:59:25,074 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 15:10:49] 2025-06-04 11:59:25,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:10:49] 2025-06-04 11:59:25,475 | INFO     | job 6677658256 has completed (purged errors)
[2025-06-04 15:10:49] 2025-06-04 11:59:25,475 | INFO     | overall cleanup function is called
[2025-06-04 15:10:49] 2025-06-04 11:59:26,484 | INFO     | --- collectZombieJob: --- 10, [31840]
[2025-06-04 15:10:49] 2025-06-04 11:59:26,485 | INFO     | zombie collector waiting for pid 31840
[2025-06-04 15:10:49] 2025-06-04 11:59:26,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:10:49] 2025-06-04 11:59:26,485 | INFO     | collected zombie processes
[2025-06-04 15:10:49] 2025-06-04 11:59:26,485 | INFO     | will attempt to kill all subprocesses of pid=31840
[2025-06-04 15:10:49] 2025-06-04 11:59:26,611 | INFO     | process IDs to be killed: [31840] (in reverse order)
[2025-06-04 15:10:49] 2025-06-04 11:59:27,610 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:10:49] 2025-06-04 11:59:27,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:10:49] 2025-06-04 11:59:27,614 | INFO     | did not find any defunct processes belonging to 31840
[2025-06-04 15:10:49] 2025-06-04 11:59:27,617 | INFO     | did not find any defunct processes belonging to 31840
[2025-06-04 15:10:49] 2025-06-04 11:59:27,617 | INFO     | ready for new job
[2025-06-04 15:10:49] 2025-06-04 11:59:27,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:10:49] 2025-06-04 11:59:27,619 | INFO     | **************************************
[2025-06-04 15:10:49] 2025-06-04 11:59:27,619 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:10:49] 2025-06-04 11:59:27,620 | INFO     | **************************************
[2025-06-04 15:10:49] 2025-06-04 11:59:27,620 | INFO     | 
[2025-06-04 15:10:49] 2025-06-04 11:59:27,620 | INFO     | pilot is running in a VM
[2025-06-04 15:10:49] 2025-06-04 11:59:27,620 | INFO     | architecture information:
[2025-06-04 15:10:49] 2025-06-04 11:59:27,634 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:10:49] 2025-06-04 11:59:27,905 | INFO     | cat /etc/os-release:
[2025-06-04 15:10:49] NAME="CentOS Linux"
[2025-06-04 15:10:49] VERSION="7 (Core)"
[2025-06-04 15:10:49] ID="centos"
[2025-06-04 15:10:49] ID_LIKE="rhel fedora"
[2025-06-04 15:10:49] VERSION_ID="7"
[2025-06-04 15:10:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:10:49] ANSI_COLOR="0;31"
[2025-06-04 15:10:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:10:49] HOME_URL="https://www.centos.org/"
[2025-06-04 15:10:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:10:49] 
[2025-06-04 15:10:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:10:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:10:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:10:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:10:49] 
[2025-06-04 15:10:49] 2025-06-04 11:59:27,905 | INFO     | **************************************
[2025-06-04 15:10:49] 2025-06-04 11:59:28,409 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 15:10:49] 2025-06-04 11:59:28,690 | INFO     | sufficient remaining disk space (496608739328 B)
[2025-06-04 15:10:49] 2025-06-04 11:59:28,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:10:49] 2025-06-04 11:59:28,691 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:10:49] 2025-06-04 11:59:28,691 | INFO     | update_server=False
[2025-06-04 15:10:49] 2025-06-04 11:59:28,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:10:49] 2025-06-04 11:59:29,047 | INFO     | all payload control threads have been joined
[2025-06-04 15:10:49] 2025-06-04 11:59:29,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:10:49] 2025-06-04 11:59:29,386 | INFO     | aborting loop
[2025-06-04 15:10:49] 2025-06-04 11:59:29,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:10:49] 2025-06-04 11:59:29,690 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:10:49] 2025-06-04 11:59:29,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:10:49] 2025-06-04 11:59:29,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:10:49] 2025-06-04 11:59:29,697 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:29,726 | INFO     | all data control threads have been joined
[2025-06-04 15:10:49] 2025-06-04 11:59:29,893 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:29,964 | INFO     | all job control threads have been joined
[2025-06-04 15:10:49] 2025-06-04 11:59:29,969 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,053 | INFO     | [payload] control thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:10:49] 2025-06-04 11:59:30,390 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,391 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,665 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,697 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,732 | INFO     | [data] control thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:30,970 | INFO     | [job] control thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:31,089 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:31,196 | INFO     | [job] validate thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:31,245 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:31,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:10:49] 2025-06-04 11:59:31,634 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:35,287 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:10:49] 2025-06-04 11:59:37,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492590995264)>', '<ExcThread(monitor, started 140491937019648)>']
[2025-06-04 15:10:49] 2025-06-04 11:59:37,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:10:49] 2025-06-04 11:59:37,738 | INFO     | [monitor] control thread has ended
[2025-06-04 15:10:49] 2025-06-04 11:59:42,247 | INFO     | all workflow threads have been joined
[2025-06-04 15:10:49] 2025-06-04 11:59:42,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:10:49] 2025-06-04 11:59:42,248 | INFO     | traces error code: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:42,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:10:49] 2025-06-04 11:59:42,548 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:10:49] 2025-06-04 11:59:42,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:10:49] 2025-06-04 11:59:42,730 [wrapper] pilotpid: 25193
[2025-06-04 15:10:49] 2025-06-04 11:59:42,849 [wrapper] Pilot exit status: 0
[2025-06-04 15:10:49] 2025-06-04 11:59:43,346 [wrapper] pandaids: 6677658256
[2025-06-04 15:10:49] 2025-06-04 11:59:44,279 [wrapper] cleanup supervisor_pilot 32465 25194
[2025-06-04 15:10:49] 2025-06-04 11:59:44,329 [wrapper] Test setup, not cleaning
[2025-06-04 15:10:49] 2025-06-04 11:59:44,379 [wrapper] apfmon messages muted
[2025-06-04 15:10:49] 2025-06-04 11:59:44,467 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:10:49] 2025-06-04 11:59:44,508 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:10:49]  *** Error codes and diagnostics ***
[2025-06-04 15:10:49]     "exeErrorCode": 0,
[2025-06-04 15:10:49]     "exeErrorDiag": "",
[2025-06-04 15:10:49]     "pilotErrorCode": 0,
[2025-06-04 15:10:49]     "pilotErrorDiag": "",
[2025-06-04 15:10:49]  *** Listing of results directory ***
[2025-06-04 15:10:49] total 397024
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-04 15:10:49] -rwx------. 1 boinc boinc     37140 Jun  3 16:18 runpilot2-wrapper.sh
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:18 queuedata.json
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:10:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:48 run_atlas
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:48 job.xml
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc      6392 Jun  4 09:48 init_data.xml
[2025-06-04 15:10:49] -rw-r--r--. 2 boinc boinc 217336721 Jun  4 09:48 EVNT.45006593._001409.pool.root.1
[2025-06-04 15:10:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:48 start_atlas.sh
[2025-06-04 15:10:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:48 shared
[2025-06-04 15:10:49] -rw-r--r--. 2 boinc boinc    508881 Jun  4 09:48 input.tar.gz
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:48 boinc_lockfile
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:58 pandaJob.out
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc    986745 Jun  4 10:01 agis_schedconf.cvmfs.json
[2025-06-04 15:10:49] drwx------. 4 boinc boinc      4096 Jun  4 10:02 pilot3
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc 182181032 Jun  4 13:56 HITS.45006595._035054.pool.root.1
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:57 boinc_task_state.xml
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc      1017 Jun  4 13:57 memory_monitor_summary.json
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc   1598969 Jun  4 13:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc    387598 Jun  4 13:58 log.45006595._035054.job.log.tgz.1
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc        95 Jun  4 13:58 pilot_heartbeat.json
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc      7691 Jun  4 13:59 heartbeat.json
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc      4417 Jun  4 13:59 pilotlog.txt
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc   1222100 Jun  4 13:59 log.45006595._035054.job.log.1
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc       357 Jun  4 13:59 output.list
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:59 runtime_log
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc   1628160 Jun  4 13:59 result.tar.gz
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc      8673 Jun  4 13:59 runtime_log.err
[2025-06-04 15:10:49] -rw-------. 1 boinc boinc       657 Jun  4 13:59 mWDMDm1dhg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmurYKDmIMUSJn.diag
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:10 boinc_mmap_file
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:10 wrapper_checkpoint.txt
[2025-06-04 15:10:49] -rw-r--r--. 1 boinc boinc     20528 Jun  4 15:10 stderr.txt
[2025-06-04 15:10:50] HITS file was successfully produced:
[2025-06-04 15:10:50] -rw-------. 1 boinc boinc 182181032 Jun  4 13:56 shared/HITS.pool.root.1
[2025-06-04 15:10:50]  *** Contents of shared directory: ***
[2025-06-04 15:10:50] total 392264
[2025-06-04 15:10:50] -rw-r--r--. 2 boinc boinc 217336721 Jun  4 09:48 ATLAS.root_0
[2025-06-04 15:10:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:48 start_atlas.sh
[2025-06-04 15:10:50] -rw-r--r--. 2 boinc boinc    508881 Jun  4 09:48 input.tar.gz
[2025-06-04 15:10:50] -rw-------. 1 boinc boinc 182181032 Jun  4 13:56 HITS.pool.root.1
[2025-06-04 15:10:50] -rw-------. 1 boinc boinc   1628160 Jun  4 13:59 result.tar.gz
15:10:51 (14074): run_atlas exited; CPU time 51152.924246
15:10:51 (14074): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN