Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:37 (154363): wrapper (7.7.26015): starting
13:00:37 (154363): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:00:37] Arguments: --nthreads 8
[2025-06-03 13:00:37] Threads: 8
[2025-06-03 13:00:37] Checking for CVMFS
[2025-06-03 13:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:00:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:00:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:00:38] 2.12.6.0 709574 219590 311064 146749 2 197 25410196 32935936 4030 130560 1 364643056 99.639 356056366 26902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:00:38] CVMFS is ok
[2025-06-03 13:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:00:38] Further information can be found at the LHC@home message board.
[2025-06-03 13:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:00:38] Checking for apptainer binary...
[2025-06-03 13:00:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:00:38] Running /usr/bin/apptainer --version
[2025-06-03 13:00:38] apptainer version 1.4.1-1.el9
[2025-06-03 13:00:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:00:38] c-5-6.aglt2.org
[2025-06-03 13:00:38] apptainer works
[2025-06-03 13:00:38] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:00:38] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:00:38] Starting ATLAS job with PandaID=6677617834
[2025-06-03 13:00:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:23:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:23:03] 2025-06-03 18:42:33,176 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:23:03] 2025-06-03 18:42:33,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:23:03] 2025-06-03 18:42:33,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:23:03] 2025-06-03 18:42:33,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:23:03] 2025-06-03 18:42:33,179 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:23:03] 2025-06-03 18:42:33,180 | INFO     | sum of square deviations: 310052325.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,180 | INFO     | sum of deviations: 27614926919.999996
[2025-06-03 16:23:03] 2025-06-03 18:42:33,180 | INFO     | mean x: 1748973092.5
[2025-06-03 16:23:03] 2025-06-03 18:42:33,180 | INFO     | mean y: 2039905.34
[2025-06-03 16:23:03] 2025-06-03 18:42:33,181 | INFO     | -- intersect: -155770906272.1605
[2025-06-03 16:23:03] 2025-06-03 18:42:33,184 | INFO     | intersect: -155770906272.1605
[2025-06-03 16:23:03] 2025-06-03 18:42:33,184 | INFO     | chi2: 4.215335500778573
[2025-06-03 16:23:03] 2025-06-03 18:42:33,185 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,185 | INFO     | sum of deviations: 31649824501.999996
[2025-06-03 16:23:03] 2025-06-03 18:42:33,185 | INFO     | mean x: 1748972940.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,185 | INFO     | mean y: 2052959.1368421053
[2025-06-03 16:23:03] 2025-06-03 18:42:33,185 | INFO     | -- intersect: -208232732817.37424
[2025-06-03 16:23:03] 2025-06-03 18:42:33,186 | INFO     | intersect: -208232732817.37424
[2025-06-03 16:23:03] 2025-06-03 18:42:33,186 | INFO     | chi2: 3.3589680598858087
[2025-06-03 16:23:03] 2025-06-03 18:42:33,186 | INFO     | current chi2=3.3589680598858087 (change=20.315522708325187 %)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,186 | INFO     | right removable region: 94
[2025-06-03 16:23:03] 2025-06-03 18:42:33,186 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,187 | INFO     | sum of deviations: 7758667530.999999
[2025-06-03 16:23:03] 2025-06-03 18:42:33,187 | INFO     | mean x: 1748973245.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,187 | INFO     | mean y: 2107950.515789474
[2025-06-03 16:23:03] 2025-06-03 18:42:33,187 | INFO     | -- intersect: -51044770773.01338
[2025-06-03 16:23:03] 2025-06-03 18:42:33,187 | INFO     | intersect: -51044770773.01338
[2025-06-03 16:23:03] 2025-06-03 18:42:33,188 | INFO     | chi2: 1.9001779534130983
[2025-06-03 16:23:03] 2025-06-03 18:42:33,188 | INFO     | current chi2=1.9001779534130983 (change=54.92226056355099 %)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,188 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 16:23:03] 2025-06-03 18:42:33,188 | INFO     | sum of deviations: -5057965090.5
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | mean x: 1748973397.5
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | mean y: 2156821.8777777776
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | -- intersect: 39140884089.09273
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | intersect: 39140884089.09273
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | chi2: 0.9552714442951883
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | current chi2=0.9552714442951883 (change=49.727264092327225 %)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,189 | INFO     | sum of square deviations: 190403570.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,190 | INFO     | sum of deviations: -5416315233.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,190 | INFO     | mean x: 1748973550.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,190 | INFO     | mean y: 2158127.705882353
[2025-06-03 16:23:03] 2025-06-03 18:42:33,190 | INFO     | -- intersect: 49754334943.3984
[2025-06-03 16:23:03] 2025-06-03 18:42:33,190 | INFO     | intersect: 49754334943.3984
[2025-06-03 16:23:03] 2025-06-03 18:42:33,191 | INFO     | chi2: 0.920502017967889
[2025-06-03 16:23:03] 2025-06-03 18:42:33,191 | INFO     | current chi2=0.920502017967889 (change=3.6397430840144738 %)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,191 | INFO     | left removable region: 30
[2025-06-03 16:23:03] 2025-06-03 18:42:33,191 | INFO     | sum of square deviations: 81266640.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,191 | INFO     | sum of deviations: -717000039.0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | mean x: 1748973824.5
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | mean y: 2183163.03125
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | -- intersect: 15433045080.990194
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | intersect: 15433045080.990194
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | chi2: 0.028994600764396524
[2025-06-03 16:23:03] 2025-06-03 18:42:33,192 | INFO     | -- intersect: 15433045080.990194
[2025-06-03 16:23:03] 2025-06-03 18:42:33,193 | INFO     | current memory leak: -8.82 B/s (using 64 data points, chi2=0.03)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,193 | INFO     | ..............................
[2025-06-03 16:23:03] 2025-06-03 18:42:33,193 | INFO     | . Timing measurements:
[2025-06-03 16:23:03] 2025-06-03 18:42:33,193 | INFO     | . get job = 0 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,193 | INFO     | . initial setup = 2 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | . payload setup = 6 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | . stage-in = 0 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | . payload execution = 6071 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | . stage-out = 0 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | . log creation = 0 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,194 | INFO     | ..............................
[2025-06-03 16:23:03] 2025-06-03 18:42:33,310 | INFO     | 
[2025-06-03 16:23:03] 2025-06-03 18:42:33,310 | INFO     | job summary report
[2025-06-03 16:23:03] 2025-06-03 18:42:33,310 | INFO     | --------------------------------------------------
[2025-06-03 16:23:03] 2025-06-03 18:42:33,310 | INFO     | PanDA job id: 6677617834
[2025-06-03 16:23:03] 2025-06-03 18:42:33,310 | INFO     | task id: 45006595
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | errors: (none)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | pilot state: finished 
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | transexitcode: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | exeerrorcode: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | exeerrordiag: 
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | exitcode: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | exitmsg: OK
[2025-06-03 16:23:03] 2025-06-03 18:42:33,311 | INFO     | cpuconsumptiontime: 40914 s
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | nevents: 400
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | neventsw: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | pid: 164834
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | pgrp: 164834
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | corecount: 8
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | event service: False
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 12: 2405474, 6080: 2432186, 6081: 2432185, 6082: 2441366, 6090: 2441480}
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | --------------------------------------------------
[2025-06-03 16:23:03] 2025-06-03 18:42:33,312 | INFO     | 
[2025-06-03 16:23:03] 2025-06-03 18:42:33,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 16:23:03] 2025-06-03 18:42:33,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:23:03] 2025-06-03 18:42:33,338 | INFO     | job 6677617834 has completed (purged errors)
[2025-06-03 16:23:03] 2025-06-03 18:42:33,338 | INFO     | overall cleanup function is called
[2025-06-03 16:23:03] 2025-06-03 18:42:34,347 | INFO     | --- collectZombieJob: --- 10, [164834]
[2025-06-03 16:23:03] 2025-06-03 18:42:34,347 | INFO     | zombie collector waiting for pid 164834
[2025-06-03 16:23:03] 2025-06-03 18:42:34,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:23:03] 2025-06-03 18:42:34,347 | INFO     | collected zombie processes
[2025-06-03 16:23:03] 2025-06-03 18:42:34,347 | INFO     | will attempt to kill all subprocesses of pid=164834
[2025-06-03 16:23:03] 2025-06-03 18:42:34,684 | INFO     | process IDs to be killed: [164834] (in reverse order)
[2025-06-03 16:23:03] 2025-06-03 18:42:34,781 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:23:03] 2025-06-03 18:42:34,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:23:03] 2025-06-03 18:42:34,793 | INFO     | did not find any defunct processes belonging to 164834
[2025-06-03 16:23:03] 2025-06-03 18:42:34,803 | INFO     | did not find any defunct processes belonging to 164834
[2025-06-03 16:23:03] 2025-06-03 18:42:34,804 | INFO     | ready for new job
[2025-06-03 16:23:03] 2025-06-03 18:42:34,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:23:03] 2025-06-03 18:42:34,805 | INFO     | **************************************
[2025-06-03 16:23:03] 2025-06-03 18:42:34,806 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:23:03] 2025-06-03 18:42:34,806 | INFO     | **************************************
[2025-06-03 16:23:03] 2025-06-03 18:42:34,806 | INFO     | 
[2025-06-03 16:23:03] 2025-06-03 18:42:34,808 | INFO     | architecture information:
[2025-06-03 16:23:03] 2025-06-03 18:42:34,815 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:23:03] 2025-06-03 18:42:34,829 | INFO     | cat /etc/os-release:
[2025-06-03 16:23:03] NAME="CentOS Linux"
[2025-06-03 16:23:03] VERSION="7 (Core)"
[2025-06-03 16:23:03] ID="centos"
[2025-06-03 16:23:03] ID_LIKE="rhel fedora"
[2025-06-03 16:23:03] VERSION_ID="7"
[2025-06-03 16:23:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:23:03] ANSI_COLOR="0;31"
[2025-06-03 16:23:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:23:03] HOME_URL="https://www.centos.org/"
[2025-06-03 16:23:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:23:03] 
[2025-06-03 16:23:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:23:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:23:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:23:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:23:03] 
[2025-06-03 16:23:03] 2025-06-03 18:42:34,830 | INFO     | **************************************
[2025-06-03 16:23:03] 2025-06-03 18:42:35,333 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 16:23:03] 2025-06-03 18:42:35,371 | INFO     | sufficient remaining disk space (74350329856 B)
[2025-06-03 16:23:03] 2025-06-03 18:42:35,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:23:03] 2025-06-03 18:42:35,372 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:23:03] 2025-06-03 18:42:35,372 | INFO     | update_server=False
[2025-06-03 16:23:03] 2025-06-03 18:42:35,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:23:03] 2025-06-03 18:42:35,487 | INFO     | PID=158377 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 16:23:03] 2025-06-03 18:42:35,487 | INFO     | .. there are 20 such processes running
[2025-06-03 16:23:03] 2025-06-03 18:42:35,488 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:23:03] 2025-06-03 18:42:35,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:23:03] 2025-06-03 18:42:35,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:23:03] 2025-06-03 18:42:36,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:23:03] 2025-06-03 18:42:36,062 | INFO     | all data control threads have been joined
[2025-06-03 16:23:03] 2025-06-03 18:42:36,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:23:03] 2025-06-03 18:42:36,168 | INFO     | all payload control threads have been joined
[2025-06-03 16:23:03] 2025-06-03 18:42:36,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:23:03] 2025-06-03 18:42:36,275 | INFO     | aborting loop
[2025-06-03 16:23:03] 2025-06-03 18:42:36,378 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,566 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,619 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,666 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,791 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,852 | INFO     | [job] validate thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:36,919 | INFO     | all job control threads have been joined
[2025-06-03 16:23:03] 2025-06-03 18:42:37,067 | INFO     | [data] control thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:37,174 | INFO     | [payload] control thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:37,280 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:37,511 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:37,693 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:37,925 | INFO     | [job] control thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:38,011 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:38,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:23:03] 2025-06-03 18:42:39,332 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:40,107 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:45,829 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:23:03] 2025-06-03 18:42:46,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:23:03] 2025-06-03 18:42:47,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516322281280)>', '<ExcThread(monitor, started 140515685164800)>']
[2025-06-03 16:23:03] 2025-06-03 18:42:48,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:23:03] 2025-06-03 18:42:48,565 | INFO     | [monitor] control thread has ended
[2025-06-03 16:23:03] 2025-06-03 18:42:52,949 | INFO     | all workflow threads have been joined
[2025-06-03 16:23:03] 2025-06-03 18:42:52,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:23:03] 2025-06-03 18:42:52,949 | INFO     | traces error code: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:52,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:23:03] 2025-06-03 18:42:53,088 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:23:03] 2025-06-03 18:42:53,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:23:03] 2025-06-03 18:42:53,096 [wrapper] pilotpid: 158377
[2025-06-03 16:23:03] 2025-06-03 18:42:53,100 [wrapper] Pilot exit status: 0
[2025-06-03 16:23:03] 2025-06-03 18:42:53,113 [wrapper] pandaids: 6677617834
[2025-06-03 16:23:03] 2025-06-03 18:42:53,183 [wrapper] cleanup supervisor_pilot  599178 158378
[2025-06-03 16:23:03] 2025-06-03 18:42:53,186 [wrapper] Test setup, not cleaning
[2025-06-03 16:23:03] 2025-06-03 18:42:53,188 [wrapper] apfmon messages muted
[2025-06-03 16:23:03] 2025-06-03 18:42:53,190 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:23:03] 2025-06-03 18:42:53,192 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:23:03]  *** Error codes and diagnostics ***
[2025-06-03 16:23:03]     "exeErrorCode": 0,
[2025-06-03 16:23:03]     "exeErrorDiag": "",
[2025-06-03 16:23:03]     "pilotErrorCode": 0,
[2025-06-03 16:23:03]     "pilotErrorDiag": "",
[2025-06-03 16:23:03]  *** Listing of results directory ***
[2025-06-03 16:23:03] total 399776
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 16:23:03] -rwx------. 1 boincer umatlas     37140 Jun  3 08:21 runpilot2-wrapper.sh
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:21 queuedata.json
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:23:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:00 run_atlas
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:00 job.xml
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas 217690332 Jun  3 13:00 EVNT.45006593._001292.pool.root.1
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:00 start_atlas.sh
[2025-06-03 16:23:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:00 shared
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 13:00 input.tar.gz
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:00 boinc_lockfile
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:00 pandaJob.out
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas    983734 Jun  3 13:00 agis_schedconf.cvmfs.json
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:23:03] drwx------. 4 boincer umatlas      4096 Jun  3 13:00 pilot3
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas 186015999 Jun  3 14:41 HITS.45006595._032111.pool.root.1
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:42 boinc_task_state.xml
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas      1032 Jun  3 14:42 memory_monitor_summary.json
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas    330274 Jun  3 14:42 log.45006595._032111.job.log.tgz.1
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas        95 Jun  3 14:42 pilot_heartbeat.json
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas      7706 Jun  3 14:42 heartbeat.json
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas      4820 Jun  3 14:42 pilotlog.txt
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas    585103 Jun  3 14:42 log.45006595._032111.job.log.1
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas       357 Jun  3 14:42 output.list
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:42 runtime_log
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas    931840 Jun  3 14:42 result.tar.gz
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas       649 Jun  3 14:42 yFVKDmRpfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpaYKDmwCUiln.diag
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 14:42 runtime_log.err
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas      6671 Jun  3 16:21 init_data.xml
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas        27 Jun  3 16:23 wrapper_checkpoint.txt
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 16:23 boinc_mmap_file
[2025-06-03 16:23:03] -rw-r--r--. 1 boincer umatlas     20834 Jun  3 16:23 stderr.txt
[2025-06-03 16:23:03] HITS file was successfully produced:
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas 186015999 Jun  3 14:41 shared/HITS.pool.root.1
[2025-06-03 16:23:03]  *** Contents of shared directory: ***
[2025-06-03 16:23:03] total 395684
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas 217690332 Jun  3 13:00 ATLAS.root_0
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:00 start_atlas.sh
[2025-06-03 16:23:03] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 13:00 input.tar.gz
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas 186015999 Jun  3 14:41 HITS.pool.root.1
[2025-06-03 16:23:03] -rw-------. 1 boincer umatlas    931840 Jun  3 14:42 result.tar.gz
16:23:05 (154363): run_atlas exited; CPU time 41093.198252
16:23:05 (154363): called boinc_finish(0)

</stderr_txt>
]]>

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