Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:37:59 (1033470): wrapper (7.7.26015): starting
02:37:59 (1033470): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 02:37:59] Arguments: --nthreads 4
[2025-06-04 02:37:59] Threads: 4
[2025-06-04 02:37:59] Checking for CVMFS
[2025-06-04 02:37:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:37:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:37:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:37:59] 2.9.2.0 289090 1928 92408 146762 2 56 23255140 36864001 0 130560 0 1992099 99.993 516657 49492 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 02:37:59] CVMFS is ok
[2025-06-04 02:37:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:37:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:37:59] Further information can be found at the LHC@home message board.
[2025-06-04 02:37:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:37:59] Checking for apptainer binary...
[2025-06-04 02:37:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:37:59] Running /usr/bin/apptainer --version
[2025-06-04 02:37:59] apptainer version 1.3.6-6.1
[2025-06-04 02:37:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:37:59] belleA263a
[2025-06-04 02:37:59] apptainer works
[2025-06-04 02:37:59] Set ATHENA_PROC_NUMBER=4
[2025-06-04 02:37:59] Set ATHENA_CORE_NUMBER=4
[2025-06-04 02:37:59] Starting ATLAS job with PandaID=6677675381
[2025-06-04 02:37:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:42:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:42:26]  filetype=log
[2025-06-04 03:42:26]  guid=0885a76c-1efe-4b2a-a6c6-f43f0c2570a7
[2025-06-04 03:42:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 03:42:26]  is_altstaged=None
[2025-06-04 03:42:26]  is_tar=False
[2025-06-04 03:42:26]  lfn=log.45006595._035738.job.log.tgz.1
[2025-06-04 03:42:26]  mtime=0
[2025-06-04 03:42:26]  protocol_id=None
[2025-06-04 03:42:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:42:26]  replicas=None
[2025-06-04 03:42:26]  scope=mc23_13p6TeV
[2025-06-04 03:42:26]  status=None
[2025-06-04 03:42:26]  status_code=0
[2025-06-04 03:42:26]  storage_token=
[2025-06-04 03:42:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677675381/log.45006595._035738.job.log.tgz.1
[2025-06-04 03:42:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/7b/log.45006595._035738.job.log.tgz.1
[2025-06-04 03:42:26]  workdir=None
[2025-06-04 03:42:26] ]
[2025-06-04 03:42:26] 2025-06-04 01:41:58,597 | INFO     | transferring file log.45006595._035738.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677675381/log.45006595._035738.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 03:42:26] 2025-06-04 01:41:58,597 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677675381/log.45006595._035738.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0357
[2025-06-04 03:42:26] 2025-06-04 01:41:58,618 | INFO     | adding to output.list: log.45006595._035738.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/7b/log.45006595._035738.job.log.tg
[2025-06-04 03:42:26] 2025-06-04 01:41:58,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:42:26] 2025-06-04 01:41:58,619 | INFO     | summary of transferred files:
[2025-06-04 03:42:26] 2025-06-04 01:41:58,619 | INFO     |  -- lfn=log.45006595._035738.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:42:26] 2025-06-04 01:41:58,619 | INFO     | stage-out finished correctly
[2025-06-04 03:42:26] 2025-06-04 01:42:01,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:42:26] 2025-06-04 01:42:02,686 | INFO     | job 6677675381 has state=finished
[2025-06-04 03:42:26] 2025-06-04 01:42:02,686 | INFO     | preparing for final server update for job 6677675381 in state='finished'
[2025-06-04 03:42:26] 2025-06-04 01:42:02,686 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:42:26] 2025-06-04 01:42:02,687 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:42:26] 2025-06-04 01:42:02,687 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:42:26] 2025-06-04 01:42:02,687 | INFO     | job 6677675381 has finished - writing final server update
[2025-06-04 03:42:26] 2025-06-04 01:42:02,687 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:42:26] 2025-06-04 01:42:02,688 | INFO     | executing command: lscpu
[2025-06-04 03:42:26] 2025-06-04 01:42:02,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:42:26] 2025-06-04 01:42:04,936 | WARNING  | process 1043816 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 03:42:26] 2025-06-04 01:42:04,936 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677675381/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:42:26] 2025-06-04 01:42:04,995 | INFO     | number of running child processes to parent process 1043816: 1
[2025-06-04 03:42:26] 2025-06-04 01:42:04,995 | INFO     | maximum number of monitored processes: 6
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677675381/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | INFO     | extracted standard info from prmon json
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:42:26] 2025-06-04 01:42:06,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | sum of deviations: 373074627.5
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | mean x: 1748999493.5
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | mean y: 2669822.375
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | -- intersect: -11983526909.86999
[2025-06-04 03:42:26] 2025-06-04 01:42:06,211 | INFO     | intersect: -11983526909.86999
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | chi2: 0.00039281063472813865
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | -- intersect: -11983526909.86999
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | current memory leak: 6.85 B/s (using 56 data points, chi2=0.00)
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | ..............................
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . Timing measurements:
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . get job = 0 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . initial setup = 1 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . payload setup = 5 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . stage-in = 0 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . payload execution = 3808 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . stage-out = 0 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | . log creation = 0 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,212 | INFO     | ..............................
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | 
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | job summary report
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | --------------------------------------------------
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | PanDA job id: 6677675381
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | task id: 45006595
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | errors: (none)
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:42:26] 2025-06-04 01:42:06,650 | INFO     | pilot state: finished 
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | transexitcode: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | exeerrorcode: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | exeerrordiag: 
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | exitcode: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | exitmsg: OK
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | cpuconsumptiontime: 14283 s
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | nevents: 400
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | neventsw: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | pid: 1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | pgrp: 1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | corecount: 4
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | event service: False
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | sizes: {0: 2405187, 4: 2405393, 11: 2405421, 3817: 2440163, 3820: 2440163, 3825: 2440333}
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | --------------------------------------------------
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | 
[2025-06-04 03:42:26] 2025-06-04 01:42:06,651 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:42:26] 2025-06-04 01:42:06,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:42:26] 2025-06-04 01:42:06,675 | INFO     | job 6677675381 has completed (purged errors)
[2025-06-04 03:42:26] 2025-06-04 01:42:06,675 | INFO     | overall cleanup function is called
[2025-06-04 03:42:26] 2025-06-04 01:42:07,682 | INFO     | --- collectZombieJob: --- 10, [1043816]
[2025-06-04 03:42:26] 2025-06-04 01:42:07,682 | INFO     | zombie collector waiting for pid 1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:07,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:42:26] 2025-06-04 01:42:07,682 | INFO     | collected zombie processes
[2025-06-04 03:42:26] 2025-06-04 01:42:07,682 | INFO     | will attempt to kill all subprocesses of pid=1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:07,727 | INFO     | process IDs to be killed: [1043816] (in reverse order)
[2025-06-04 03:42:26] 2025-06-04 01:42:07,763 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:42:26] 2025-06-04 01:42:07,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:42:26] 2025-06-04 01:42:07,766 | INFO     | did not find any defunct processes belonging to 1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:07,767 | INFO     | did not find any defunct processes belonging to 1043816
[2025-06-04 03:42:26] 2025-06-04 01:42:07,767 | INFO     | ready for new job
[2025-06-04 03:42:26] 2025-06-04 01:42:07,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | **************************************
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | **************************************
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | 
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | architecture information:
[2025-06-04 03:42:26] 2025-06-04 01:42:07,768 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:42:26] 2025-06-04 01:42:07,783 | INFO     | cat /etc/os-release:
[2025-06-04 03:42:26] NAME="CentOS Linux"
[2025-06-04 03:42:26] VERSION="7 (Core)"
[2025-06-04 03:42:26] ID="centos"
[2025-06-04 03:42:26] ID_LIKE="rhel fedora"
[2025-06-04 03:42:26] VERSION_ID="7"
[2025-06-04 03:42:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:42:26] ANSI_COLOR="0;31"
[2025-06-04 03:42:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:42:26] HOME_URL="https://www.centos.org/"
[2025-06-04 03:42:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:42:26] 
[2025-06-04 03:42:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:42:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:42:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:42:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:42:26] 
[2025-06-04 03:42:26] 2025-06-04 01:42:07,784 | INFO     | **************************************
[2025-06-04 03:42:26] 2025-06-04 01:42:08,287 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 03:42:26] 2025-06-04 01:42:08,306 | INFO     | sufficient remaining disk space (332410126336 B)
[2025-06-04 03:42:26] 2025-06-04 01:42:08,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | INFO     | update_server=False
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:42:26] 2025-06-04 01:42:08,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:42:26] 2025-06-04 01:42:08,468 | INFO     | all job control threads have been joined
[2025-06-04 03:42:26] 2025-06-04 01:42:08,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:42:26] 2025-06-04 01:42:08,506 | INFO     | aborting loop
[2025-06-04 03:42:26] 2025-06-04 01:42:08,972 | INFO     | all data control threads have been joined
[2025-06-04 03:42:26] 2025-06-04 01:42:09,109 | INFO     | all payload control threads have been joined
[2025-06-04 03:42:26] 2025-06-04 01:42:09,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:42:26] 2025-06-04 01:42:09,312 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,348 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,398 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,474 | INFO     | [job] control thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,511 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,717 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:09,978 | INFO     | [data] control thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:10,064 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:10,115 | INFO     | [payload] control thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:10,467 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:10,644 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:10,699 | INFO     | [job] validate thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:11,180 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:11,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:42:26] 2025-06-04 01:42:12,272 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:12,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:18,704 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:42:26] 2025-06-04 01:42:19,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:42:26] 2025-06-04 01:42:21,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193953593152)>', '<ExcThread(monitor, started 140192614700800)>']
[2025-06-04 03:42:26] 2025-06-04 01:42:21,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:42:26] 2025-06-04 01:42:21,377 | INFO     | [monitor] control thread has ended
[2025-06-04 03:42:26] 2025-06-04 01:42:26,203 | INFO     | all workflow threads have been joined
[2025-06-04 03:42:26] 2025-06-04 01:42:26,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:42:26] 2025-06-04 01:42:26,204 | INFO     | traces error code: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:26,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:42:26] 2025-06-04 01:42:26,284 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:42:26] 2025-06-04 01:42:26,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:42:26] 2025-06-04 01:42:26,293 [wrapper] pilotpid: 1037181
[2025-06-04 03:42:26] 2025-06-04 01:42:26,298 [wrapper] Pilot exit status: 0
[2025-06-04 03:42:26] 2025-06-04 01:42:26,310 [wrapper] pandaids: 6677675381
[2025-06-04 03:42:26] 2025-06-04 01:42:26,333 [wrapper] cleanup supervisor_pilot 1054055 1037182
[2025-06-04 03:42:26] 2025-06-04 01:42:26,338 [wrapper] Test setup, not cleaning
[2025-06-04 03:42:26] 2025-06-04 01:42:26,342 [wrapper] apfmon messages muted
[2025-06-04 03:42:26] 2025-06-04 01:42:26,346 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:42:26] 2025-06-04 01:42:26,349 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:42:26]  *** Error codes and diagnostics ***
[2025-06-04 03:42:26]     "exeErrorCode": 0,
[2025-06-04 03:42:26]     "exeErrorDiag": "",
[2025-06-04 03:42:26]     "pilotErrorCode": 0,
[2025-06-04 03:42:26]     "pilotErrorDiag": "",
[2025-06-04 03:42:26]  *** Listing of results directory ***
[2025-06-04 03:42:26] total 385672
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-04 03:42:26] -rwx------ 1 boinc boinc     37140 Jun  3 16:38 runpilot2-wrapper.sh
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:38 queuedata.json
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:42:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:37 run_atlas
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:37 job.xml
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc 213130904 Jun  4 02:37 EVNT.45006593._001436.pool.root.1
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc      6863 Jun  4 02:37 init_data.xml
[2025-06-04 03:42:26] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:37 shared
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc    508878 Jun  4 02:37 input.tar.gz
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:37 start_atlas.sh
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:37 boinc_lockfile
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc      2525 Jun  4 02:37 pandaJob.out
[2025-06-04 03:42:26] -rw------- 1 boinc boinc    986069 Jun  4 02:38 agis_schedconf.cvmfs.json
[2025-06-04 03:42:26] -rw------- 1 boinc boinc   1603667 Jun  4 02:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:42:26] drwx------ 4 boinc boinc      4096 Jun  4 02:38 pilot3
[2025-06-04 03:42:26] -rw------- 1 boinc boinc        95 Jun  4 03:41 pilot_heartbeat.json
[2025-06-04 03:42:26] -rw------- 1 boinc boinc 176727412 Jun  4 03:41 HITS.45006595._035738.pool.root.1
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc       530 Jun  4 03:41 boinc_task_state.xml
[2025-06-04 03:42:26] -rw------- 1 boinc boinc      1022 Jun  4 03:41 memory_monitor_summary.json
[2025-06-04 03:42:26] -rw------- 1 boinc boinc    233388 Jun  4 03:41 log.45006595._035738.job.log.tgz.1
[2025-06-04 03:42:26] -rw------- 1 boinc boinc      7662 Jun  4 03:42 heartbeat.json
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc      8192 Jun  4 03:42 boinc_mmap_file
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc        27 Jun  4 03:42 wrapper_checkpoint.txt
[2025-06-04 03:42:26] -rw------- 1 boinc boinc      4552 Jun  4 03:42 pilotlog.txt
[2025-06-04 03:42:26] -rw------- 1 boinc boinc    385080 Jun  4 03:42 log.45006595._035738.job.log.1
[2025-06-04 03:42:26] -rw------- 1 boinc boinc       357 Jun  4 03:42 output.list
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc       620 Jun  4 03:42 runtime_log
[2025-06-04 03:42:26] -rw------- 1 boinc boinc    634880 Jun  4 03:42 result.tar.gz
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc      8753 Jun  4 03:42 runtime_log.err
[2025-06-04 03:42:26] -rw------- 1 boinc boinc       662 Jun  4 03:42 cMSLDm4xhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnakKDmI8IL6n.diag
[2025-06-04 03:42:26] -rw-r--r-- 1 boinc boinc     21177 Jun  4 03:42 stderr.txt
[2025-06-04 03:42:26] HITS file was successfully produced:
[2025-06-04 03:42:26] -rw------- 1 boinc boinc 176727412 Jun  4 03:41 shared/HITS.pool.root.1
[2025-06-04 03:42:26]  *** Contents of shared directory: ***
[2025-06-04 03:42:26] total 381868
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc 213130904 Jun  4 02:37 ATLAS.root_0
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc    508878 Jun  4 02:37 input.tar.gz
[2025-06-04 03:42:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:37 start_atlas.sh
[2025-06-04 03:42:26] -rw------- 1 boinc boinc 176727412 Jun  4 03:41 HITS.pool.root.1
[2025-06-04 03:42:26] -rw------- 1 boinc boinc    634880 Jun  4 03:42 result.tar.gz
03:42:28 (1033470): run_atlas exited; CPU time 14290.770271
03:42:28 (1033470): called boinc_finish(0)

</stderr_txt>
]]>

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