Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:03:26 (40171): wrapper (7.7.26015): starting
13:03:26 (40171): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:03:26] Arguments: --nthreads 8
[2025-06-03 13:03:26] Threads: 8
[2025-06-03 13:03:26] Checking for CVMFS
[2025-06-03 13:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:03:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:03:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:03:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:03:27] 2.11.2.0 29162 104301 457728 146749 1 187 12687991 18432000 2724 130560 0 161311234 98.442 528839284 37203 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 13:03:27] CVMFS is ok
[2025-06-03 13:03:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:03:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:03:27] Further information can be found at the LHC@home message board.
[2025-06-03 13:03:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:03:27] Checking for apptainer binary...
[2025-06-03 13:03:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:03:27] Running /usr/bin/apptainer --version
[2025-06-03 13:03:27] apptainer version 1.3.2-1.el7
[2025-06-03 13:03:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:03:27] c-211-28.aglt2.org
[2025-06-03 13:03:27] apptainer works
[2025-06-03 13:03:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:03:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:03:27] Starting ATLAS job with PandaID=6677659044
[2025-06-03 13:03:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:46:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:46:16] 2025-06-03 20:45:56,814 | INFO     | sum of square deviations: 3169461948.110589
[2025-06-03 16:46:16] 2025-06-03 20:45:56,833 | INFO     | sum of deviations: -118703429731.83871
[2025-06-03 16:46:16] 2025-06-03 20:45:56,834 | INFO     | mean x: 1748976828.5253456
[2025-06-03 16:46:16] 2025-06-03 20:45:56,834 | INFO     | mean y: 2339973.5161290322
[2025-06-03 16:46:16] 2025-06-03 20:45:56,834 | INFO     | -- intersect: 65505428972.97067
[2025-06-03 16:46:16] 2025-06-03 20:45:56,834 | INFO     | intersect: 65505428972.97067
[2025-06-03 16:46:16] 2025-06-03 20:45:56,835 | INFO     | chi2: 11.028395896681143
[2025-06-03 16:46:16] 2025-06-03 20:45:56,835 | INFO     | sum of square deviations: 2955483401.698119
[2025-06-03 16:46:16] 2025-06-03 20:45:56,837 | INFO     | sum of deviations: -50670943047.037735
[2025-06-03 16:46:16] 2025-06-03 20:45:56,837 | INFO     | mean x: 1748976676.037736
[2025-06-03 16:46:16] 2025-06-03 20:45:56,837 | INFO     | mean y: 2388464.254716981
[2025-06-03 16:46:16] 2025-06-03 20:45:56,837 | INFO     | -- intersect: 29988108394.600517
[2025-06-03 16:46:16] 2025-06-03 20:45:56,837 | INFO     | intersect: 29988108394.600517
[2025-06-03 16:46:16] 2025-06-03 20:45:56,838 | INFO     | chi2: 6.336841809690581
[2025-06-03 16:46:16] 2025-06-03 20:45:56,838 | INFO     | current chi2=6.336841809690581 (change=42.5406752799147 %)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,838 | INFO     | sum of square deviations: 2751339151.4009547
[2025-06-03 16:46:16] 2025-06-03 20:45:56,840 | INFO     | sum of deviations: 17433616396.091827
[2025-06-03 16:46:16] 2025-06-03 20:45:56,840 | INFO     | mean x: 1748976523.5410628
[2025-06-03 16:46:16] 2025-06-03 20:45:56,840 | INFO     | mean y: 2439348.4009661837
[2025-06-03 16:46:16] 2025-06-03 20:45:56,841 | INFO     | -- intersect: -11079795199.695166
[2025-06-03 16:46:16] 2025-06-03 20:45:56,841 | INFO     | intersect: -11079795199.695166
[2025-06-03 16:46:16] 2025-06-03 20:45:56,841 | INFO     | chi2: 2.090154734826389
[2025-06-03 16:46:16] 2025-06-03 20:45:56,841 | INFO     | current chi2=2.090154734826389 (change=67.01582905809592 %)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,842 | INFO     | sum of square deviations: 2556595270.5990047
[2025-06-03 16:46:16] 2025-06-03 20:45:56,843 | INFO     | sum of deviations: 31445353408.113876
[2025-06-03 16:46:16] 2025-06-03 20:45:56,843 | INFO     | mean x: 1748976370.9554455
[2025-06-03 16:46:16] 2025-06-03 20:45:56,844 | INFO     | mean y: 2450113.123762376
[2025-06-03 16:46:16] 2025-06-03 20:45:56,844 | INFO     | -- intersect: -21509433570.46325
[2025-06-03 16:46:16] 2025-06-03 20:45:56,844 | INFO     | intersect: -21509433570.46325
[2025-06-03 16:46:16] 2025-06-03 20:45:56,844 | INFO     | chi2: 1.2334662312991624
[2025-06-03 16:46:16] 2025-06-03 20:45:56,844 | INFO     | current chi2=1.2334662312991624 (change=40.98684605751853 %)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,845 | INFO     | sum of square deviations: 2371407648.3248825
[2025-06-03 16:46:16] 2025-06-03 20:45:56,846 | INFO     | sum of deviations: 30646324516.766537
[2025-06-03 16:46:16] 2025-06-03 20:45:56,846 | INFO     | mean x: 1748976218.431472
[2025-06-03 16:46:16] 2025-06-03 20:45:56,847 | INFO     | mean y: 2449454.9086294416
[2025-06-03 16:46:16] 2025-06-03 20:45:56,847 | INFO     | -- intersect: -22600030047.095108
[2025-06-03 16:46:16] 2025-06-03 20:45:56,847 | INFO     | intersect: -22600030047.095108
[2025-06-03 16:46:16] 2025-06-03 20:45:56,847 | INFO     | chi2: 1.2337258968815292
[2025-06-03 16:46:16] 2025-06-03 20:45:56,848 | INFO     | current chi2=1.2337258968815292 (change=-0.021051697709899217 %)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,848 | INFO     | right removable region: 196
[2025-06-03 16:46:16] 2025-06-03 20:45:56,848 | INFO     | sum of square deviations: 2955413861.698119
[2025-06-03 16:46:16] 2025-06-03 20:45:56,850 | INFO     | sum of deviations: -144709400401.8302
[2025-06-03 16:46:16] 2025-06-03 20:45:56,850 | INFO     | mean x: 1748976981.037736
[2025-06-03 16:46:16] 2025-06-03 20:45:56,850 | INFO     | mean y: 2358289.853773585
[2025-06-03 16:46:16] 2025-06-03 20:45:56,850 | INFO     | -- intersect: 85639572597.68399
[2025-06-03 16:46:16] 2025-06-03 20:45:56,850 | INFO     | intersect: 85639572597.68399
[2025-06-03 16:46:16] 2025-06-03 20:45:56,851 | INFO     | chi2: 9.965960139145077
[2025-06-03 16:46:16] 2025-06-03 20:45:56,851 | INFO     | current chi2=9.965960139145077 (change=9.633638178112495 %)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,851 | INFO     | left removable region: 10
[2025-06-03 16:46:16] 2025-06-03 20:45:56,852 | INFO     | sum of square deviations: 1996003245.6559086
[2025-06-03 16:46:16] 2025-06-03 20:45:56,853 | INFO     | sum of deviations: 3922962311.752697
[2025-06-03 16:46:16] 2025-06-03 20:45:56,853 | INFO     | mean x: 1748976492.9569893
[2025-06-03 16:46:16] 2025-06-03 20:45:56,853 | INFO     | mean y: 2472300.8440860217
[2025-06-03 16:46:16] 2025-06-03 20:45:56,853 | INFO     | -- intersect: -3434981461.289963
[2025-06-03 16:46:16] 2025-06-03 20:45:56,854 | INFO     | intersect: -3434981461.289963
[2025-06-03 16:46:16] 2025-06-03 20:45:56,854 | INFO     | chi2: 0.0024021623587145964
[2025-06-03 16:46:16] 2025-06-03 20:45:56,854 | INFO     | -- intersect: -3434981461.289963
[2025-06-03 16:46:16] 2025-06-03 20:45:56,854 | INFO     | current memory leak: 1.97 B/s (using 186 data points, chi2=0.00)
[2025-06-03 16:46:16] 2025-06-03 20:45:56,855 | INFO     | ..............................
[2025-06-03 16:46:16] 2025-06-03 20:45:56,855 | INFO     | . Timing measurements:
[2025-06-03 16:46:16] 2025-06-03 20:45:56,855 | INFO     | . get job = 0 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . initial setup = 2 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . payload setup = 5 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . stage-in = 0 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . payload execution = 13199 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . stage-out = 12 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | . log creation = 0 s
[2025-06-03 16:46:16] 2025-06-03 20:45:56,856 | INFO     | ..............................
[2025-06-03 16:46:16] 2025-06-03 20:45:57,348 | INFO     | 
[2025-06-03 16:46:16] 2025-06-03 20:45:57,348 | INFO     | job summary report
[2025-06-03 16:46:16] 2025-06-03 20:45:57,348 | INFO     | --------------------------------------------------
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | PanDA job id: 6677659044
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | task id: 45006595
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | errors: (none)
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | pilot state: finished 
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | transexitcode: 0
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | exeerrorcode: 0
[2025-06-03 16:46:16] 2025-06-03 20:45:57,349 | INFO     | exeerrordiag: 
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | exitcode: 0
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | exitmsg: OK
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | cpuconsumptiontime: 68767 s
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | nevents: 400
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | neventsw: 0
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | pid: 15765
[2025-06-03 16:46:16] 2025-06-03 20:45:57,350 | INFO     | pgrp: 15765
[2025-06-03 16:46:16] 2025-06-03 20:45:57,351 | INFO     | corecount: 8
[2025-06-03 16:46:16] 2025-06-03 20:45:57,351 | INFO     | event service: False
[2025-06-03 16:46:16] 2025-06-03 20:45:57,351 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 13212: 2435168, 13215: 2435167, 13230: 2444164, 13234: 2444348, 13327: 2444518}
[2025-06-03 16:46:16] 2025-06-03 20:45:57,381 | INFO     | --------------------------------------------------
[2025-06-03 16:46:16] 2025-06-03 20:45:57,381 | INFO     | 
[2025-06-03 16:46:16] 2025-06-03 20:45:57,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 16:46:16] 2025-06-03 20:45:57,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:46:16] 2025-06-03 20:45:57,759 | INFO     | job 6677659044 has completed (purged errors)
[2025-06-03 16:46:16] 2025-06-03 20:45:57,760 | INFO     | overall cleanup function is called
[2025-06-03 16:46:16] 2025-06-03 20:45:58,795 | INFO     | --- collectZombieJob: --- 10, [15765]
[2025-06-03 16:46:16] 2025-06-03 20:45:58,795 | INFO     | zombie collector waiting for pid 15765
[2025-06-03 16:46:16] 2025-06-03 20:45:58,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:46:16] 2025-06-03 20:45:58,796 | INFO     | collected zombie processes
[2025-06-03 16:46:16] 2025-06-03 20:45:58,796 | INFO     | will attempt to kill all subprocesses of pid=15765
[2025-06-03 16:46:16] 2025-06-03 20:46:01,110 | INFO     | process IDs to be killed: [15765] (in reverse order)
[2025-06-03 16:46:16] 2025-06-03 20:46:01,586 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:46:16] 2025-06-03 20:46:01,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:46:16] 2025-06-03 20:46:01,599 | INFO     | did not find any defunct processes belonging to 15765
[2025-06-03 16:46:16] 2025-06-03 20:46:01,619 | INFO     | did not find any defunct processes belonging to 15765
[2025-06-03 16:46:16] 2025-06-03 20:46:01,620 | INFO     | ready for new job
[2025-06-03 16:46:16] 2025-06-03 20:46:01,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:46:16] 2025-06-03 20:46:01,622 | INFO     | **************************************
[2025-06-03 16:46:16] 2025-06-03 20:46:01,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:46:16] 2025-06-03 20:46:01,623 | INFO     | **************************************
[2025-06-03 16:46:16] 2025-06-03 20:46:01,623 | INFO     | 
[2025-06-03 16:46:16] 2025-06-03 20:46:01,629 | INFO     | architecture information:
[2025-06-03 16:46:16] 2025-06-03 20:46:01,637 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:46:16] 2025-06-03 20:46:01,758 | INFO     | cat /etc/os-release:
[2025-06-03 16:46:16] NAME="CentOS Linux"
[2025-06-03 16:46:16] VERSION="7 (Core)"
[2025-06-03 16:46:16] ID="centos"
[2025-06-03 16:46:16] ID_LIKE="rhel fedora"
[2025-06-03 16:46:16] VERSION_ID="7"
[2025-06-03 16:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:46:16] ANSI_COLOR="0;31"
[2025-06-03 16:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:46:16] HOME_URL="https://www.centos.org/"
[2025-06-03 16:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:46:16] 
[2025-06-03 16:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:46:16] 
[2025-06-03 16:46:16] 2025-06-03 20:46:01,758 | INFO     | **************************************
[2025-06-03 16:46:16] 2025-06-03 20:46:02,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 16:46:16] 2025-06-03 20:46:02,400 | INFO     | sufficient remaining disk space (56411291648 B)
[2025-06-03 16:46:16] 2025-06-03 20:46:02,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:46:16] 2025-06-03 20:46:02,401 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:46:16] 2025-06-03 20:46:02,401 | INFO     | update_server=False
[2025-06-03 16:46:16] 2025-06-03 20:46:02,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:46:16] 2025-06-03 20:46:02,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:46:16] 2025-06-03 20:46:02,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:46:16] 2025-06-03 20:46:02,402 | INFO     | aborting loop
[2025-06-03 16:46:16] 2025-06-03 20:46:02,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:46:16] 2025-06-03 20:46:02,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:46:16] 2025-06-03 20:46:03,151 | INFO     | all data control threads have been joined
[2025-06-03 16:46:16] 2025-06-03 20:46:03,159 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:46:16] 2025-06-03 20:46:03,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:46:16] 2025-06-03 20:46:03,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:46:16] 2025-06-03 20:46:03,244 | INFO     | all payload control threads have been joined
[2025-06-03 16:46:16] 2025-06-03 20:46:03,406 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:03,411 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:03,415 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:03,505 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:03,844 | INFO     | all job control threads have been joined
[2025-06-03 16:46:16] 2025-06-03 20:46:04,157 | INFO     | [data] control thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,250 | INFO     | [payload] control thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,408 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,460 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,494 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,504 | INFO     | [job] validate thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,514 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,621 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,759 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:04,850 | INFO     | [job] control thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:06,429 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:46:16] 2025-06-03 20:46:06,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968587163456)>', '<ExcThread(monitor, started 139967984547584)>']
[2025-06-03 16:46:16] 2025-06-03 20:46:07,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:46:16] 2025-06-03 20:46:07,183 | INFO     | [monitor] control thread has ended
[2025-06-03 16:46:16] 2025-06-03 20:46:11,659 | INFO     | all workflow threads have been joined
[2025-06-03 16:46:16] 2025-06-03 20:46:11,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:46:16] 2025-06-03 20:46:11,660 | INFO     | traces error code: 0
[2025-06-03 16:46:16] 2025-06-03 20:46:11,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:46:16] 2025-06-03 20:46:13,789 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:46:16] 2025-06-03 20:46:13,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:46:16] 2025-06-03 20:46:13,893 [wrapper] pilotpid: 45821
[2025-06-03 16:46:16] 2025-06-03 20:46:13,956 [wrapper] Pilot exit status: 0
[2025-06-03 16:46:16] 2025-06-03 20:46:14,237 [wrapper] pandaids: 6677659044
[2025-06-03 16:46:16] 2025-06-03 20:46:14,661 [wrapper] cleanup supervisor_pilot 44159 45822
[2025-06-03 16:46:16] 2025-06-03 20:46:14,697 [wrapper] Test setup, not cleaning
[2025-06-03 16:46:16] 2025-06-03 20:46:14,738 [wrapper] apfmon messages muted
[2025-06-03 16:46:16] 2025-06-03 20:46:14,841 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:46:16] 2025-06-03 20:46:14,876 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:46:16]  *** Error codes and diagnostics ***
[2025-06-03 16:46:16]     "exeErrorCode": 0,
[2025-06-03 16:46:16]     "exeErrorDiag": "",
[2025-06-03 16:46:16]     "pilotErrorCode": 0,
[2025-06-03 16:46:16]     "pilotErrorDiag": "",
[2025-06-03 16:46:16]  *** Listing of results directory ***
[2025-06-03 16:46:16] total 388088
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:09 pilot3.tar.gz
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 10:22 queuedata.json
[2025-06-03 16:46:16] -rwx------ 1 boincer umatlas     37140 Jun  3 10:23 runpilot2-wrapper.sh
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas       100 Jun  3 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:46:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 13:03 run_atlas
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas       105 Jun  3 13:03 job.xml
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas 216382184 Jun  3 13:03 EVNT.45006593._001418.pool.root.1
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:03 start_atlas.sh
[2025-06-03 16:46:16] drwxrwx--x 2 boincer umatlas      4096 Jun  3 13:03 shared
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 13:03 input.tar.gz
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas         0 Jun  3 13:03 boinc_lockfile
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 13:03 pandaJob.out
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas    983734 Jun  3 13:03 agis_schedconf.cvmfs.json
[2025-06-03 16:46:16] drwx------ 4 boincer umatlas      4096 Jun  3 13:03 pilot3
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas 174193653 Jun  3 16:31 HITS.45006595._035290.pool.root.1
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas       530 Jun  3 16:32 boinc_task_state.xml
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas      6036 Jun  3 16:39 init_data.xml
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas      1071 Jun  3 16:43 memory_monitor_summary.json
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas   1603667 Jun  3 16:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas    392647 Jun  3 16:44 log.45006595._035290.job.log.tgz.1
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas        95 Jun  3 16:45 pilot_heartbeat.json
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas      7745 Jun  3 16:45 heartbeat.json
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 16:46 boinc_mmap_file
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas        28 Jun  3 16:46 wrapper_checkpoint.txt
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas      4353 Jun  3 16:46 pilotlog.txt
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas   1108546 Jun  3 16:46 log.45006595._035290.job.log.1
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas       357 Jun  3 16:46 output.list
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas       620 Jun  3 16:46 runtime_log
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas   1515520 Jun  3 16:46 result.tar.gz
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas      8660 Jun  3 16:46 runtime_log.err
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas       661 Jun  3 16:46 7LCNDm4ihg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmatYKDmkgcJvm.diag
[2025-06-03 16:46:16] -rw-r--r-- 1 boincer umatlas     20788 Jun  3 16:46 stderr.txt
[2025-06-03 16:46:16] HITS file was successfully produced:
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas 174193653 Jun  3 16:31 shared/HITS.pool.root.1
[2025-06-03 16:46:16]  *** Contents of shared directory: ***
[2025-06-03 16:46:16] total 383424
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas 216382184 Jun  3 13:03 ATLAS.root_0
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:03 start_atlas.sh
[2025-06-03 16:46:16] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 13:03 input.tar.gz
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas 174193653 Jun  3 16:31 HITS.pool.root.1
[2025-06-03 16:46:16] -rw------- 1 boincer umatlas   1515520 Jun  3 16:46 result.tar.gz
16:46:17 (40171): run_atlas exited; CPU time 69082.604097
16:46:17 (40171): called boinc_finish(0)

</stderr_txt>
]]>

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