Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:30 (31950): wrapper (7.7.26015): starting
07:04:30 (31950): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:04:30] Arguments: --nthreads 8
[2025-06-04 07:04:30] Threads: 8
[2025-06-04 07:04:30] Checking for CVMFS
[2025-06-04 07:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:04:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:04:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:04:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:04:32] 2.11.2.0 2191 32752 91932 146768 3 69 12982770 25165824 3906 130560 0 16574100 99.787 19850415 2336 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:04:32] CVMFS is ok
[2025-06-04 07:04:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:04:32] Checking for apptainer binary...
[2025-06-04 07:04:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:04:32] Running /usr/bin/apptainer --version
[2025-06-04 07:04:32] apptainer version 1.3.2-1.el7
[2025-06-04 07:04:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:07:16] cg-vwn409.simple-grid.lan
[2025-06-04 07:07:16] apptainer works
[2025-06-04 07:07:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:07:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:07:16] Starting ATLAS job with PandaID=6677659132
[2025-06-04 07:07:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:12:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:12:06] 2025-06-04 08:59:10,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:12:06] 2025-06-04 08:59:10,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:12:06] 2025-06-04 08:59:10,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:12:06] 2025-06-04 08:59:10,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:12:06] 2025-06-04 08:59:10,560 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:12:06] 2025-06-04 08:59:10,560 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,562 | INFO     | sum of deviations: -13572543737.000029
[2025-06-04 14:12:06] 2025-06-04 08:59:10,563 | INFO     | mean x: 1749020887.5
[2025-06-04 14:12:06] 2025-06-04 08:59:10,563 | INFO     | mean y: 2479259.8333333335
[2025-06-04 14:12:06] 2025-06-04 08:59:10,563 | INFO     | -- intersect: 7599195017.94396
[2025-06-04 14:12:06] 2025-06-04 08:59:10,563 | INFO     | intersect: 7599195017.94396
[2025-06-04 14:12:06] 2025-06-04 08:59:10,563 | INFO     | chi2: 5.138214495235753
[2025-06-04 14:12:06] 2025-06-04 08:59:10,564 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,566 | INFO     | sum of deviations: 15888772541.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,566 | INFO     | mean x: 1749020735.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,566 | INFO     | mean y: 2500157.8246445497
[2025-06-04 14:12:06] 2025-06-04 08:59:10,566 | INFO     | -- intersect: -9537958876.773613
[2025-06-04 14:12:06] 2025-06-04 08:59:10,566 | INFO     | intersect: -9537958876.773613
[2025-06-04 14:12:06] 2025-06-04 08:59:10,567 | INFO     | chi2: 3.5553601717193977
[2025-06-04 14:12:06] 2025-06-04 08:59:10,567 | INFO     | current chi2=3.5553601717193977 (change=30.805532252186186 %)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,567 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | sum of deviations: 15759346034.999987
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | mean x: 1749020582.5
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | mean y: 2500060.2621359224
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | -- intersect: -10166149042.41646
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | intersect: -10166149042.41646
[2025-06-04 14:12:06] 2025-06-04 08:59:10,569 | INFO     | chi2: 3.558493658107931
[2025-06-04 14:12:06] 2025-06-04 08:59:10,570 | INFO     | current chi2=3.558493658107931 (change=-0.08813414779909978 %)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,570 | INFO     | right removable region: 205
[2025-06-04 14:12:06] 2025-06-04 08:59:10,584 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,585 | INFO     | sum of deviations: -72988354217.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,585 | INFO     | mean x: 1749021040.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,586 | INFO     | mean y: 2521803.559241706
[2025-06-04 14:12:06] 2025-06-04 08:59:10,586 | INFO     | -- intersect: 43828596035.766266
[2025-06-04 14:12:06] 2025-06-04 08:59:10,586 | INFO     | intersect: 43828596035.766266
[2025-06-04 14:12:06] 2025-06-04 08:59:10,586 | INFO     | chi2: 1.9693933549135916
[2025-06-04 14:12:06] 2025-06-04 08:59:10,586 | INFO     | current chi2=1.9693933549135916 (change=61.671639890867745 %)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,587 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 14:12:06] 2025-06-04 08:59:10,588 | INFO     | sum of deviations: -76682855390.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,588 | INFO     | mean x: 1749021192.5
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | mean y: 2524508.5631067962
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | -- intersect: 49481818819.07626
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | intersect: 49481818819.07626
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | chi2: 1.8846746777978618
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | current chi2=1.8846746777978618 (change=4.301765155465698 %)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,589 | INFO     | left removable region: 20
[2025-06-04 14:12:06] 2025-06-04 08:59:10,590 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,591 | INFO     | sum of deviations: -34487368639.00001
[2025-06-04 14:12:06] 2025-06-04 08:59:10,591 | INFO     | mean x: 1749021162.0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,591 | INFO     | mean y: 2538825.0756756756
[2025-06-04 14:12:06] 2025-06-04 08:59:10,591 | INFO     | -- intersect: 30726287500.41655
[2025-06-04 14:12:06] 2025-06-04 08:59:10,592 | INFO     | intersect: 30726287500.41655
[2025-06-04 14:12:06] 2025-06-04 08:59:10,592 | INFO     | chi2: 0.18099998924704308
[2025-06-04 14:12:06] 2025-06-04 08:59:10,592 | INFO     | -- intersect: 30726287500.41655
[2025-06-04 14:12:06] 2025-06-04 08:59:10,592 | INFO     | current memory leak: -17.57 B/s (using 185 data points, chi2=0.18)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,593 | INFO     | ..............................
[2025-06-04 14:12:06] 2025-06-04 08:59:10,593 | INFO     | . Timing measurements:
[2025-06-04 14:12:06] 2025-06-04 08:59:10,593 | INFO     | . get job = 0 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . initial setup = 12 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . payload setup = 167 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . stage-in = 0 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . payload execution = 13263 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . stage-out = 4 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | . log creation = 1 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,594 | INFO     | ..............................
[2025-06-04 14:12:06] 2025-06-04 08:59:10,891 | INFO     | 
[2025-06-04 14:12:06] 2025-06-04 08:59:10,891 | INFO     | job summary report
[2025-06-04 14:12:06] 2025-06-04 08:59:10,891 | INFO     | --------------------------------------------------
[2025-06-04 14:12:06] 2025-06-04 08:59:10,891 | INFO     | PanDA job id: 6677659132
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | task id: 45006595
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | errors: (none)
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | pilot state: finished 
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | transexitcode: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | exeerrorcode: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | exeerrordiag: 
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | exitcode: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | exitmsg: OK
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | cpuconsumptiontime: 49131 s
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | nevents: 400
[2025-06-04 14:12:06] 2025-06-04 08:59:10,892 | INFO     | neventsw: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | pid: 17900
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | pgrp: 17900
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | corecount: 8
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | event service: False
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 82: 2405770, 87: 2405826, 13434: 2435669
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | --------------------------------------------------
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | 
[2025-06-04 14:12:06] 2025-06-04 08:59:10,893 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 14:12:06] 2025-06-04 08:59:11,032 | INFO     | PID=5326 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 14:12:06] 2025-06-04 08:59:11,033 | INFO     | .. there are 9 such processes running
[2025-06-04 14:12:06] 2025-06-04 08:59:11,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:12:06] 2025-06-04 08:59:11,414 | INFO     | job 6677659132 has completed (purged errors)
[2025-06-04 14:12:06] 2025-06-04 08:59:11,414 | INFO     | overall cleanup function is called
[2025-06-04 14:12:06] 2025-06-04 08:59:12,423 | INFO     | --- collectZombieJob: --- 10, [17900]
[2025-06-04 14:12:06] 2025-06-04 08:59:12,423 | INFO     | zombie collector waiting for pid 17900
[2025-06-04 14:12:06] 2025-06-04 08:59:12,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:12:06] 2025-06-04 08:59:12,423 | INFO     | collected zombie processes
[2025-06-04 14:12:06] 2025-06-04 08:59:12,423 | INFO     | will attempt to kill all subprocesses of pid=17900
[2025-06-04 14:12:06] 2025-06-04 08:59:12,548 | INFO     | process IDs to be killed: [17900] (in reverse order)
[2025-06-04 14:12:06] 2025-06-04 08:59:13,293 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:12:06] 2025-06-04 08:59:13,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:12:06] 2025-06-04 08:59:13,296 | INFO     | did not find any defunct processes belonging to 17900
[2025-06-04 14:12:06] 2025-06-04 08:59:13,300 | INFO     | did not find any defunct processes belonging to 17900
[2025-06-04 14:12:06] 2025-06-04 08:59:13,300 | INFO     | ready for new job
[2025-06-04 14:12:06] 2025-06-04 08:59:13,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:12:06] 2025-06-04 08:59:13,302 | INFO     | **************************************
[2025-06-04 14:12:06] 2025-06-04 08:59:13,303 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:12:06] 2025-06-04 08:59:13,303 | INFO     | **************************************
[2025-06-04 14:12:06] 2025-06-04 08:59:13,303 | INFO     | 
[2025-06-04 14:12:06] 2025-06-04 08:59:13,303 | INFO     | pilot is running in a VM
[2025-06-04 14:12:06] 2025-06-04 08:59:13,303 | INFO     | architecture information:
[2025-06-04 14:12:06] 2025-06-04 08:59:13,318 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:12:06] 2025-06-04 08:59:13,552 | INFO     | cat /etc/os-release:
[2025-06-04 14:12:06] NAME="CentOS Linux"
[2025-06-04 14:12:06] VERSION="7 (Core)"
[2025-06-04 14:12:06] ID="centos"
[2025-06-04 14:12:06] ID_LIKE="rhel fedora"
[2025-06-04 14:12:06] VERSION_ID="7"
[2025-06-04 14:12:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:12:06] ANSI_COLOR="0;31"
[2025-06-04 14:12:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:12:06] HOME_URL="https://www.centos.org/"
[2025-06-04 14:12:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:12:06] 
[2025-06-04 14:12:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:12:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:12:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:12:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:12:06] 
[2025-06-04 14:12:06] 2025-06-04 08:59:13,552 | INFO     | **************************************
[2025-06-04 14:12:06] 2025-06-04 08:59:14,056 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 14:12:06] 2025-06-04 08:59:14,317 | INFO     | sufficient remaining disk space (496709402624 B)
[2025-06-04 14:12:06] 2025-06-04 08:59:14,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:12:06] 2025-06-04 08:59:14,317 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:12:06] 2025-06-04 08:59:14,317 | INFO     | update_server=False
[2025-06-04 14:12:06] 2025-06-04 08:59:14,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:12:06] 2025-06-04 08:59:14,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:12:06] 2025-06-04 08:59:14,740 | INFO     | all data control threads have been joined
[2025-06-04 14:12:06] 2025-06-04 08:59:14,835 | INFO     | all payload control threads have been joined
[2025-06-04 14:12:06] 2025-06-04 08:59:15,047 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:12:06] 2025-06-04 08:59:15,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:12:06] 2025-06-04 08:59:15,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:12:06] 2025-06-04 08:59:15,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:12:06] 2025-06-04 08:59:15,301 | INFO     | aborting loop
[2025-06-04 14:12:06] 2025-06-04 08:59:15,323 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:12:06] 2025-06-04 08:59:15,415 | INFO     | all job control threads have been joined
[2025-06-04 14:12:06] 2025-06-04 08:59:15,468 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,476 | INFO     | [job] validate thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,746 | INFO     | [data] control thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:12:06] 2025-06-04 08:59:15,840 | INFO     | [payload] control thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,864 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:15,988 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,307 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,421 | INFO     | [job] control thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,500 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,556 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,573 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:16,806 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:17,412 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:18,337 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:12:06] 2025-06-04 08:59:19,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023978583872)>', '<ExcThread(monitor, started 140023299036928)>']
[2025-06-04 14:12:06] 2025-06-04 08:59:20,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:12:06] 2025-06-04 08:59:20,077 | INFO     | [monitor] control thread has ended
[2025-06-04 14:12:06] 2025-06-04 08:59:24,424 | INFO     | all workflow threads have been joined
[2025-06-04 14:12:06] 2025-06-04 08:59:24,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:12:06] 2025-06-04 08:59:24,424 | INFO     | traces error code: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:24,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:12:06] 2025-06-04 08:59:24,774 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:12:06] 2025-06-04 08:59:24,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:12:06] 2025-06-04 08:59:24,926 [wrapper] pilotpid: 5326
[2025-06-04 14:12:06] 2025-06-04 08:59:24,980 [wrapper] Pilot exit status: 0
[2025-06-04 14:12:06] 2025-06-04 08:59:25,425 [wrapper] pandaids: 6677659132
[2025-06-04 14:12:06] 2025-06-04 08:59:26,242 [wrapper] cleanup supervisor_pilot 27525 5327
[2025-06-04 14:12:06] 2025-06-04 08:59:26,364 [wrapper] Test setup, not cleaning
[2025-06-04 14:12:06] 2025-06-04 08:59:26,416 [wrapper] apfmon messages muted
[2025-06-04 14:12:06] 2025-06-04 08:59:26,442 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:12:06] 2025-06-04 08:59:26,461 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:12:06]  *** Error codes and diagnostics ***
[2025-06-04 14:12:06]     "exeErrorCode": 0,
[2025-06-04 14:12:06]     "exeErrorDiag": "",
[2025-06-04 14:12:06]     "pilotErrorCode": 0,
[2025-06-04 14:12:06]     "pilotErrorDiag": "",
[2025-06-04 14:12:06]  *** Listing of results directory ***
[2025-06-04 14:12:06] total 392096
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-04 14:12:06] -rwx------. 1 boinc boinc     37140 Jun  3 16:25 runpilot2-wrapper.sh
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:25 queuedata.json
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:12:06] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:04 run_atlas
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:04 job.xml
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc 217243903 Jun  4 07:04 EVNT.45006593._001422.pool.root.1
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc      6392 Jun  4 07:04 init_data.xml
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:04 start_atlas.sh
[2025-06-04 14:12:06] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:04 shared
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc    508880 Jun  4 07:04 input.tar.gz
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:04 boinc_lockfile
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:07 pandaJob.out
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc    986745 Jun  4 07:10 agis_schedconf.cvmfs.json
[2025-06-04 14:12:06] drwx------. 4 boinc boinc      4096 Jun  4 07:10 pilot3
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc 177326395 Jun  4 10:56 HITS.45006595._035378.pool.root.1
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc       531 Jun  4 10:56 boinc_task_state.xml
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc      1019 Jun  4 10:57 memory_monitor_summary.json
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc   1603667 Jun  4 10:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc    382165 Jun  4 10:57 log.45006595._035378.job.log.tgz.1
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc        95 Jun  4 10:59 pilot_heartbeat.json
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc      7700 Jun  4 10:59 heartbeat.json
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc      4416 Jun  4 10:59 pilotlog.txt
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc   1171908 Jun  4 10:59 log.45006595._035378.job.log.1
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc       357 Jun  4 10:59 output.list
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc       620 Jun  4 10:59 runtime_log
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc   1576960 Jun  4 10:59 result.tar.gz
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc      8659 Jun  4 10:59 runtime_log.err
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc       657 Jun  4 10:59 jGnNDm1khg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDuYKDmx0kOXm.diag
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:12 boinc_mmap_file
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:12 wrapper_checkpoint.txt
[2025-06-04 14:12:06] -rw-r--r--. 1 boinc boinc     20584 Jun  4 14:12 stderr.txt
[2025-06-04 14:12:06] HITS file was successfully produced:
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc 177326395 Jun  4 10:56 shared/HITS.pool.root.1
[2025-06-04 14:12:06]  *** Contents of shared directory: ***
[2025-06-04 14:12:06] total 387384
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc 217243903 Jun  4 07:04 ATLAS.root_0
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:04 start_atlas.sh
[2025-06-04 14:12:06] -rw-r--r--. 2 boinc boinc    508880 Jun  4 07:04 input.tar.gz
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc 177326395 Jun  4 10:56 HITS.pool.root.1
[2025-06-04 14:12:06] -rw-------. 1 boinc boinc   1576960 Jun  4 10:59 result.tar.gz
14:12:08 (31950): run_atlas exited; CPU time 49308.087662
14:12:08 (31950): called boinc_finish(0)

</stderr_txt>
]]>

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