Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 12:28:26 (141317): Detected: vboxwrapper 26206
2025-06-03 12:28:26 (141317): Detected: BOINC client v7.16.16
2025-06-03 12:28:26 (141317): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-06-03 12:28:26 (141317): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 12:28:26 (141317): Create VM. (boinc_d4dfa08b35fc06c2, slot#0)
2025-06-03 12:28:26 (141317): Setting Memory Size for VM. (4400MB)
2025-06-03 12:28:26 (141317): Setting CPU Count for VM. (4)
2025-06-03 12:28:27 (141317): Setting Chipset Options for VM.
2025-06-03 12:28:27 (141317): Setting Graphics Controller Options for VM.
2025-06-03 12:28:27 (141317): Setting Boot Options for VM.
2025-06-03 12:28:27 (141317): Setting Network Configuration for NAT.
2025-06-03 12:28:27 (141317): Enabling VM Network Access.
2025-06-03 12:28:27 (141317): Disabling USB Support for VM.
2025-06-03 12:28:27 (141317): Disabling COM Port Support for VM.
2025-06-03 12:28:27 (141317): Disabling LPT Port Support for VM.
2025-06-03 12:28:27 (141317): Disabling Audio Support for VM.
2025-06-03 12:28:27 (141317): Disabling Clipboard Support for VM.
2025-06-03 12:28:27 (141317): Disabling Drag and Drop Support for VM.
2025-06-03 12:28:27 (141317): Adding storage controller(s) to VM.
2025-06-03 12:28:27 (141317): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 12:28:29 (141317): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 12:28:29 (141317): forwarding host port 44891 to guest port 80
2025-06-03 12:28:29 (141317): Enabling remote desktop for VM.
2025-06-03 12:28:29 (141317): Enabling shared directory for VM.
2025-06-03 12:28:29 (141317): Starting VM using VBoxManage interface. (boinc_d4dfa08b35fc06c2, slot#0)
2025-06-03 12:28:30 (141317): Successfully started VM. (PID = '141790')
2025-06-03 12:28:30 (141317): Reporting VM Process ID to BOINC.
2025-06-03 12:28:30 (141317): Guest Log: BIOS: VirtualBox 7.0.12
2025-06-03 12:28:30 (141317): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 12:28:30 (141317): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 12:28:30 (141317): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 12:28:30 (141317): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 12:28:30 (141317): Detected: Web Application Enabled (http://localhost:44891)
2025-06-03 12:28:30 (141317): Detected: Remote Desktop Enabled (localhost:43639)
2025-06-03 12:28:30 (141317): Preference change detected
2025-06-03 12:28:30 (141317): Setting CPU throttle for VM. (100%)
2025-06-03 12:28:30 (141317): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 12:28:32 (141317): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 12:28:32 (141317): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 12:28:35 (141317): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 12:28:35 (141317): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 12:28:35 (141317): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 12:28:44 (141317): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 12:28:44 (141317): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 12:28:51 (141317): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000138 main     Log opened 2025-06-03T17:28:49.187068000Z
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000216 main     OS Product: Linux
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000252 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000268 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000268 main     Process ID: 1294
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.000269 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 12:28:51 (141317): Guest Log: 00:00:00.002298 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 12:28:51 (141317): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 12:28:51 (141317): Guest Log: [INFO] Mounting shared directory
2025-06-03 12:28:51 (141317): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 12:28:54 (141317): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 12:28:54 (141317): Guest Log: [INFO] Detected branch: prod
2025-06-03 12:28:54 (141317): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 12:28:54 (141317): Guest Log: Copying input files
2025-06-03 12:28:55 (141317): Guest Log: Copied input files into RunAtlas.
2025-06-03 12:28:55 (141317): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 12:28:55 (141317): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 12:28:55 (141317): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 12:28:55 (141317): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 12:29:03 (141317): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 12:29:03 (141317): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 12:29:03 (141317): Guest Log: 2.6.3.0 1569 0 30168 146750 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 12:29:05 (141317): Guest Log: copied the webapp to /var/www
2025-06-03 12:29:05 (141317): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-03 12:29:05 (141317): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-03 12:29:05 (141317): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 12:29:05 (141317): Guest Log:  *** Starting ATLAS job. (PandaID=6677658935 taskID=45006595) ***
2025-06-03 13:54:28 (141317): Guest Log:  *** Job finished ***
2025-06-03 13:54:28 (141317): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:18,689 | INFO     | [payload] execute_payloads thread has finished
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:20,096 | INFO     | [data] copytool_out thread has finished
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:20,603 | INFO     | [data] queue_monitor thread has finished
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:22,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293603649344)>', '<ExcThread(monitor, started 140292346865408)>']
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:23,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:23,681 | INFO     | [monitor] control thread has ended
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,693 | INFO     | all workflow threads have been joined
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,694 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,694 | INFO     | traces error code: 0
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,768 [wrapper] ==== pilot stdout END ====
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,774 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,778 [wrapper] pilotpid: 5872
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,783 [wrapper] Pilot exit status: 0
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,878 [wrapper] pandaids: 6677658935
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,954 [wrapper] cleanup supervisor_pilot  1696 5873
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,960 [wrapper] Test setup, not cleaning
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,964 [wrapper] apfmon messages muted
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,969 [wrapper] ==== wrapper stdout END ====
2025-06-03 13:54:28 (141317): Guest Log: 2025-06-03 18:54:27,975 [wrapper] ==== wrapper stderr END ====
2025-06-03 13:54:28 (141317): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 13:54:28 (141317): Guest Log:     "exeErrorCode": 0,
2025-06-03 13:54:28 (141317): Guest Log:     "exeErrorDiag": "",
2025-06-03 13:54:28 (141317): Guest Log:     "pilotErrorCode": 0,
2025-06-03 13:54:28 (141317): Guest Log:     "pilotErrorDiag": "",
2025-06-03 13:54:28 (141317): Guest Log:  *** Listing of results directory ***
2025-06-03 13:54:28 (141317): Guest Log: total 173568
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 14:09 pilot3.tar.gz
2025-06-03 13:54:28 (141317): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 14:23 runpilot2-wrapper.sh
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 14:23 queuedata.json
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 17:28 start_atlas.sh
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas    508881 Jun  3 17:28 input.tar.gz
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas      9096 Jun  3 17:28 init_data.xml
2025-06-03 13:54:28 (141317): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 17:28 EVNT.45006593._001414.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  3 17:29 pandaJob.out
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas    985078 Jun  3 17:29 agis_schedconf.cvmfs.json
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 17:29 agis_ddmendpoints.agis.ALL.json
2025-06-03 13:54:28 (141317): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 17:29 pilot3
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas 172611766 Jun  3 18:53 HITS.45006595._035181.pool.root.1
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 18:53 pilot_heartbeat.json
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  3 18:54 memory_monitor_summary.json
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas    244731 Jun  3 18:54 log.45006595._035181.job.log.tgz.1
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas      7717 Jun  3 18:54 heartbeat.json
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  3 18:54 pilotlog.txt
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas    435140 Jun  3 18:54 log.45006595._035181.job.log.1
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 18:54 output.list
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 18:54 runtime_log
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas    696320 Jun  3 18:54 result.tar.gz
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 atlas atlas      8604 Jun  3 18:54 runtime_log.err
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas       657 Jun  3 18:54 AXyKDmNjhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEXkKDm17nrKm.diag
2025-06-03 13:54:28 (141317): Guest Log: Looking for outputfile HITS.45006595._035181.pool.root.1
2025-06-03 13:54:28 (141317): Guest Log: HITS file was successfully produced
2025-06-03 13:54:28 (141317): Guest Log: -rw-------. 1 atlas atlas 172611766 Jun  3 18:53 /home/atlas/RunAtlas/HITS.45006595._035181.pool.root.1
2025-06-03 13:54:28 (141317): Guest Log: Successfully finished the ATLAS job!
2025-06-03 13:54:28 (141317): Guest Log: Copying the results back to the shared directory!
2025-06-03 13:54:28 (141317): Guest Log:  *** Contents of shared directory: ***
2025-06-03 13:54:28 (141317): Guest Log: total 212828
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 root root 216697149 Jun  3 17:28 ATLAS.root_0
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 root root      9096 Jun  3 17:28 init_data.xml
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 root root    508881 Jun  3 17:28 input.tar.gz
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 root root    696320 Jun  3 18:54 result.tar.gz
2025-06-03 13:54:28 (141317): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 17:28 start_atlas.sh
2025-06-03 13:54:28 (141317): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 13:54:29 (141317): VM Completion File Detected.
2025-06-03 13:54:29 (141317): Powering off VM.
2025-06-03 13:54:29 (141317): Successfully stopped VM.
2025-06-03 13:54:29 (141317): Deregistering VM. (boinc_d4dfa08b35fc06c2, slot#0)
2025-06-03 13:54:29 (141317): Removing network bandwidth throttle group from VM.
2025-06-03 13:54:29 (141317): Removing VM from VirtualBox.
13:54:34 (141317): called boinc_finish(0)

</stderr_txt>
]]>

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