Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:28:26 (3325097): wrapper (7.7.26015): starting
15:28:26 (3325097): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 15:28:26] Arguments: --nthreads 4
[2025-06-05 15:28:26] Threads: 4
[2025-06-05 15:28:26] Checking for CVMFS
[2025-06-05 15:28:26] No cvmfs_config command found, will try listing directly
[2025-06-05 15:28:26] CVMFS is ok
[2025-06-05 15:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:28:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:28:26] Further information can be found at the LHC@home message board.
[2025-06-05 15:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:28:26] Checking for apptainer binary...
[2025-06-05 15:28:26] which: no apptainer in ((null))
[2025-06-05 15:28:26] apptainer is not installed, using version from CVMFS
[2025-06-05 15:28:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:28:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-06-05 15:28:26] apptainer works
[2025-06-05 15:28:26] Set ATHENA_PROC_NUMBER=4
[2025-06-05 15:28:26] Set ATHENA_CORE_NUMBER=4
[2025-06-05 15:28:26] Starting ATLAS job with PandaID=6677637543
[2025-06-05 15:28:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:58:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:58:49] 2025-06-05 16:57:48,538 | INFO     | executing command: lscpu
[2025-06-05 18:58:49] 2025-06-05 16:57:48,589 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:58:49] 2025-06-05 16:57:48,881 | INFO     | monitor loop #919: job 0:6677637543 is in state 'finished'
[2025-06-05 18:58:49] 2025-06-05 16:57:48,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:58:49] 2025-06-05 16:57:51,384 | INFO     | monitor loop #920: job 0:6677637543 is in state 'finished'
[2025-06-05 18:58:49] 2025-06-05 16:57:51,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,652 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:58:49] 2025-06-05 16:57:52,652 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677637543/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,654 | INFO     | extracted standard info from prmon json
[2025-06-05 18:58:49] 2025-06-05 16:57:52,654 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:58:49] 2025-06-05 16:57:52,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:58:49] 2025-06-05 16:57:52,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:58:49] 2025-06-05 16:57:52,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:58:49] 2025-06-05 16:57:52,660 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:58:49] 2025-06-05 16:57:52,660 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,662 | INFO     | sum of deviations: -28463950540.000008
[2025-06-05 18:58:49] 2025-06-05 16:57:52,662 | INFO     | mean x: 1749136396.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,662 | INFO     | mean y: 2354760.4563106797
[2025-06-05 18:58:49] 2025-06-05 16:57:52,662 | INFO     | -- intersect: 18369810501.935574
[2025-06-05 18:58:49] 2025-06-05 16:57:52,663 | INFO     | intersect: 18369810501.935574
[2025-06-05 18:58:49] 2025-06-05 16:57:52,663 | INFO     | chi2: 2.815485194655881
[2025-06-05 18:58:49] 2025-06-05 16:57:52,663 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,665 | INFO     | sum of deviations: -16104302499.000008
[2025-06-05 18:58:49] 2025-06-05 16:57:52,665 | INFO     | mean x: 1749136244.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,665 | INFO     | mean y: 2364359.9552238807
[2025-06-05 18:58:49] 2025-06-05 16:57:52,666 | INFO     | -- intersect: 11189263229.896238
[2025-06-05 18:58:49] 2025-06-05 16:57:52,666 | INFO     | intersect: 11189263229.896238
[2025-06-05 18:58:49] 2025-06-05 16:57:52,666 | INFO     | chi2: 2.1625807597042157
[2025-06-05 18:58:49] 2025-06-05 16:57:52,666 | INFO     | current chi2=2.1625807597042157 (change=23.189766232511328 %)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,667 | INFO     | right removable region: 200
[2025-06-05 18:58:49] 2025-06-05 16:57:52,667 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,668 | INFO     | sum of deviations: -63477740456.00001
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | mean x: 1749136549.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | mean y: 2382239.815920398
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | -- intersect: 44097380259.2865
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | intersect: 44097380259.2865
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | chi2: 1.0659204842142178
[2025-06-05 18:58:49] 2025-06-05 16:57:52,669 | INFO     | current chi2=1.0659204842142178 (change=62.14078886873712 %)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,670 | INFO     | sum of square deviations: 2334722845.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,671 | INFO     | sum of deviations: -57533571879.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,672 | INFO     | mean x: 1749136701.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,672 | INFO     | mean y: 2377241.8826530613
[2025-06-05 18:58:49] 2025-06-05 16:57:52,672 | INFO     | -- intersect: 43105601403.30203
[2025-06-05 18:58:49] 2025-06-05 16:57:52,672 | INFO     | intersect: 43105601403.30203
[2025-06-05 18:58:49] 2025-06-05 16:57:52,672 | INFO     | chi2: 1.0417260995719833
[2025-06-05 18:58:49] 2025-06-05 16:57:52,673 | INFO     | current chi2=1.0417260995719833 (change=2.2698113978051873 %)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,673 | INFO     | left removable region: 20
[2025-06-05 18:58:49] 2025-06-05 16:57:52,673 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,674 | INFO     | sum of deviations: -25866515365.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,675 | INFO     | mean x: 1749136823.5
[2025-06-05 18:58:49] 2025-06-05 16:57:52,675 | INFO     | mean y: 2369822.827777778
[2025-06-05 18:58:49] 2025-06-05 16:57:52,675 | INFO     | -- intersect: 25021901380.77357
[2025-06-05 18:58:49] 2025-06-05 16:57:52,675 | INFO     | intersect: 25021901380.77357
[2025-06-05 18:58:49] 2025-06-05 16:57:52,675 | INFO     | chi2: 0.2731581132741927
[2025-06-05 18:58:49] 2025-06-05 16:57:52,676 | INFO     | -- intersect: 25021901380.77357
[2025-06-05 18:58:49] 2025-06-05 16:57:52,676 | INFO     | current memory leak: -14.30 B/s (using 180 data points, chi2=0.27)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,676 | INFO     | ..............................
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . Timing measurements:
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . get job = 0 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . initial setup = 1 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . payload setup = 7 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . stage-in = 0 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . payload execution = 12521 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . stage-out = 1 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,677 | INFO     | . log creation = 0 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,678 | INFO     | ..............................
[2025-06-05 18:58:49] 2025-06-05 16:57:52,804 | INFO     | 
[2025-06-05 18:58:49] 2025-06-05 16:57:52,804 | INFO     | job summary report
[2025-06-05 18:58:49] 2025-06-05 16:57:52,804 | INFO     | --------------------------------------------------
[2025-06-05 18:58:49] 2025-06-05 16:57:52,804 | INFO     | PanDA job id: 6677637543
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | task id: 45006595
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | errors: (none)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | pilot state: finished 
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | transexitcode: 0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | exeerrorcode: 0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | exeerrordiag: 
[2025-06-05 18:58:49] 2025-06-05 16:57:52,805 | INFO     | exitcode: 0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | exitmsg: OK
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | cpuconsumptiontime: 47631 s
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | nevents: 400
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | neventsw: 0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | pid: 3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | pgrp: 3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | corecount: 4
[2025-06-05 18:58:49] 2025-06-05 16:57:52,806 | INFO     | event service: False
[2025-06-05 18:58:49] 2025-06-05 16:57:52,807 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 12531: 2427183, 12532: 2427182, 12534: 2436329, 12536: 2436385, 12541: 2436555}
[2025-06-05 18:58:49] 2025-06-05 16:57:52,807 | INFO     | --------------------------------------------------
[2025-06-05 18:58:49] 2025-06-05 16:57:52,807 | INFO     | 
[2025-06-05 18:58:49] 2025-06-05 16:57:52,807 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-05 18:58:49] 2025-06-05 16:57:52,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:58:49] 2025-06-05 16:57:52,830 | INFO     | job 6677637543 has completed (purged errors)
[2025-06-05 18:58:49] 2025-06-05 16:57:52,830 | INFO     | overall cleanup function is called
[2025-06-05 18:58:49] 2025-06-05 16:57:53,838 | INFO     | --- collectZombieJob: --- 10, [3335697]
[2025-06-05 18:58:49] 2025-06-05 16:57:53,838 | INFO     | zombie collector waiting for pid 3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:53,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:58:49] 2025-06-05 16:57:53,838 | INFO     | collected zombie processes
[2025-06-05 18:58:49] 2025-06-05 16:57:53,838 | INFO     | will attempt to kill all subprocesses of pid=3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:54,212 | INFO     | process IDs to be killed: [3335697] (in reverse order)
[2025-06-05 18:58:49] 2025-06-05 16:57:54,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:58:49] 2025-06-05 16:57:54,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:58:49] 2025-06-05 16:57:54,300 | INFO     | did not find any defunct processes belonging to 3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:54,308 | INFO     | did not find any defunct processes belonging to 3335697
[2025-06-05 18:58:49] 2025-06-05 16:57:54,309 | INFO     | ready for new job
[2025-06-05 18:58:49] 2025-06-05 16:57:54,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:58:49] 2025-06-05 16:57:54,311 | INFO     | **************************************
[2025-06-05 18:58:49] 2025-06-05 16:57:54,311 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:58:49] 2025-06-05 16:57:54,311 | INFO     | **************************************
[2025-06-05 18:58:49] 2025-06-05 16:57:54,312 | INFO     | 
[2025-06-05 18:58:49] 2025-06-05 16:57:54,315 | INFO     | architecture information:
[2025-06-05 18:58:49] 2025-06-05 16:57:54,315 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:58:49] 2025-06-05 16:57:54,330 | INFO     | cat /etc/os-release:
[2025-06-05 18:58:49] NAME="CentOS Linux"
[2025-06-05 18:58:49] VERSION="7 (Core)"
[2025-06-05 18:58:49] ID="centos"
[2025-06-05 18:58:49] ID_LIKE="rhel fedora"
[2025-06-05 18:58:49] VERSION_ID="7"
[2025-06-05 18:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:58:49] ANSI_COLOR="0;31"
[2025-06-05 18:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:58:49] HOME_URL="https://www.centos.org/"
[2025-06-05 18:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:58:49] 
[2025-06-05 18:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:58:49] 
[2025-06-05 18:58:49] 2025-06-05 16:57:54,331 | INFO     | **************************************
[2025-06-05 18:58:49] 2025-06-05 16:57:54,834 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-05 18:58:49] 2025-06-05 16:57:54,851 | INFO     | sufficient remaining disk space (1653992325120 B)
[2025-06-05 18:58:49] 2025-06-05 16:57:54,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:58:49] 2025-06-05 16:57:54,852 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:58:49] 2025-06-05 16:57:54,852 | INFO     | update_server=False
[2025-06-05 18:58:49] 2025-06-05 16:57:54,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:58:49] 2025-06-05 16:57:54,852 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:58:49] 2025-06-05 16:57:54,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:58:49] 2025-06-05 16:57:54,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:58:49] 2025-06-05 16:57:54,853 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:58:49] 2025-06-05 16:57:54,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:58:49] 2025-06-05 16:57:54,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:58:49] 2025-06-05 16:57:54,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:58:49] 2025-06-05 16:57:54,892 | INFO     | aborting loop
[2025-06-05 18:58:49] 2025-06-05 16:57:55,287 | INFO     | all payload control threads have been joined
[2025-06-05 18:58:49] 2025-06-05 16:57:55,307 | INFO     | all job control threads have been joined
[2025-06-05 18:58:49] 2025-06-05 16:57:55,703 | INFO     | all data control threads have been joined
[2025-06-05 18:58:49] 2025-06-05 16:57:55,857 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:55,888 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:55,894 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:55,900 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,196 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,243 | INFO     | [job] validate thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,292 | INFO     | [payload] control thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,312 | INFO     | [job] control thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,575 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,641 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,704 | INFO     | [data] control thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:56,859 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:57,049 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:57,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:58:49] 2025-06-05 16:57:58,818 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:57:58,859 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:58:05,391 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:58:49] 2025-06-05 16:58:06,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:58:49] 2025-06-05 16:58:06,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22895331571520)>', '<ExcThread(monitor, started 22895086487296)>']
[2025-06-05 18:58:49] 2025-06-05 16:58:07,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:58:49] 2025-06-05 16:58:07,915 | INFO     | [monitor] control thread has ended
[2025-06-05 18:58:49] 2025-06-05 16:58:11,952 | INFO     | all workflow threads have been joined
[2025-06-05 18:58:49] 2025-06-05 16:58:11,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:58:49] 2025-06-05 16:58:11,953 | INFO     | traces error code: 0
[2025-06-05 18:58:49] 2025-06-05 16:58:11,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:58:49] 2025-06-05 16:58:12,105 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:58:49] 2025-06-05 16:58:12,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:58:49] 2025-06-05 16:58:12,111 [wrapper] pilotpid: 3328761
[2025-06-05 18:58:49] 2025-06-05 16:58:12,113 [wrapper] Pilot exit status: 0
[2025-06-05 18:58:49] 2025-06-05 16:58:12,124 [wrapper] pandaids: 6677637543
[2025-06-05 18:58:49] 2025-06-05 16:58:12,186 [wrapper] cleanup supervisor_pilot 3547684 3328762
[2025-06-05 18:58:49] 2025-06-05 16:58:12,189 [wrapper] Test setup, not cleaning
[2025-06-05 18:58:49] 2025-06-05 16:58:12,191 [wrapper] apfmon messages muted
[2025-06-05 18:58:49] 2025-06-05 16:58:12,194 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:58:49] 2025-06-05 16:58:12,197 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:58:49]  *** Error codes and diagnostics ***
[2025-06-05 18:58:49]     "exeErrorCode": 0,
[2025-06-05 18:58:49]     "exeErrorDiag": "",
[2025-06-05 18:58:49]     "pilotErrorCode": 0,
[2025-06-05 18:58:49]     "pilotErrorDiag": "",
[2025-06-05 18:58:49]  *** Listing of results directory ***
[2025-06-05 18:58:49] total 393364
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-05 18:58:49] -rwx------ 1 boinc boinc     37140 Jun  3 16:06 runpilot2-wrapper.sh
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:06 queuedata.json
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc       100 Jun  5 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:58:49] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 15:28 run_atlas
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc       105 Jun  5 15:28 job.xml
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc      6422 Jun  5 15:28 init_data.xml
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc 214476181 Jun  5 15:28 EVNT.45006593._001401.pool.root.1
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:28 start_atlas.sh
[2025-06-05 18:58:49] drwxrwx--x 2 boinc boinc      4096 Jun  5 15:28 shared
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc    508881 Jun  5 15:28 input.tar.gz
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc         0 Jun  5 15:28 boinc_lockfile
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc      2525 Jun  5 15:28 pandaJob.out
[2025-06-05 18:58:49] -rw------- 1 boinc boinc    983210 Jun  5 15:28 agis_schedconf.cvmfs.json
[2025-06-05 18:58:49] drwx------ 4 boinc boinc      4096 Jun  5 15:28 pilot3
[2025-06-05 18:58:49] -rw------- 1 boinc boinc 181511326 Jun  5 18:57 HITS.45006595._034838.pool.root.1
[2025-06-05 18:58:49] -rw------- 1 boinc boinc        95 Jun  5 18:57 pilot_heartbeat.json
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc       528 Jun  5 18:57 boinc_task_state.xml
[2025-06-05 18:58:49] -rw------- 1 boinc boinc      1037 Jun  5 18:57 memory_monitor_summary.json
[2025-06-05 18:58:49] -rw------- 1 boinc boinc   1598969 Jun  5 18:57 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:58:49] -rw------- 1 boinc boinc    317970 Jun  5 18:57 log.45006595._034838.job.log.tgz.1
[2025-06-05 18:58:49] -rw------- 1 boinc boinc      7731 Jun  5 18:57 heartbeat.json
[2025-06-05 18:58:49] -rw------- 1 boinc boinc      4559 Jun  5 18:58 pilotlog.txt
[2025-06-05 18:58:49] -rw------- 1 boinc boinc   1173485 Jun  5 18:58 log.45006595._034838.job.log.1
[2025-06-05 18:58:49] -rw------- 1 boinc boinc       357 Jun  5 18:58 output.list
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:58 runtime_log
[2025-06-05 18:58:49] -rw------- 1 boinc boinc   1515520 Jun  5 18:58 result.tar.gz
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc      9026 Jun  5 18:58 runtime_log.err
[2025-06-05 18:58:49] -rw------- 1 boinc boinc       665 Jun  5 18:58 rTdKDmMShg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqqYKDmwqzEjn.diag
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc        26 Jun  5 18:58 wrapper_checkpoint.txt
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:58 boinc_mmap_file
[2025-06-05 18:58:49] -rw-r--r-- 1 boinc boinc     20936 Jun  5 18:58 stderr.txt
[2025-06-05 18:58:49] HITS file was successfully produced:
[2025-06-05 18:58:49] -rw------- 1 boinc boinc 181511326 Jun  5 18:57 shared/HITS.pool.root.1
[2025-06-05 18:58:49]  *** Contents of shared directory: ***
[2025-06-05 18:58:49] total 388712
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc 214476181 Jun  5 15:28 ATLAS.root_0
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:28 start_atlas.sh
[2025-06-05 18:58:49] -rw-r--r-- 2 boinc boinc    508881 Jun  5 15:28 input.tar.gz
[2025-06-05 18:58:49] -rw------- 1 boinc boinc 181511326 Jun  5 18:57 HITS.pool.root.1
[2025-06-05 18:58:49] -rw------- 1 boinc boinc   1515520 Jun  5 18:58 result.tar.gz
18:58:51 (3325097): run_atlas exited; CPU time 48092.411474
18:58:51 (3325097): called boinc_finish(0)

</stderr_txt>
]]>

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