Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:17 (16550): wrapper (7.7.26015): starting
14:17:17 (16550): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:17:17] Arguments: --nthreads 8
[2025-06-04 14:17:17] Threads: 8
[2025-06-04 14:17:17] Checking for CVMFS
[2025-06-04 14:17:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:17:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:17:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:17:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:17:20] 2.11.2.0 3391 33197 93580 146780 0 158 15175169 25165825 2853 130560 0 17693537 99.816 19555188 2007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:17:20] CVMFS is ok
[2025-06-04 14:17:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:17:20] Checking for apptainer binary...
[2025-06-04 14:17:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:17:20] Running /usr/bin/apptainer --version
[2025-06-04 14:17:20] apptainer version 1.3.2-1.el7
[2025-06-04 14:17:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:17:22] cg-vwn306.simple-grid.lan
[2025-06-04 14:17:22] apptainer works
[2025-06-04 14:17:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:17:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:17:22] Starting ATLAS job with PandaID=6677658999
[2025-06-04 14:17:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:06:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:06:04] 2025-06-04 16:03:52,161 | INFO     | extracted standard info from prmon json
[2025-06-04 18:06:04] 2025-06-04 16:03:52,161 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:06:04] 2025-06-04 16:03:52,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:06:04] 2025-06-04 16:03:52,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:06:04] 2025-06-04 16:03:52,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:06:04] 2025-06-04 16:03:52,167 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:06:04] 2025-06-04 16:03:52,168 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,170 | INFO     | sum of deviations: -44859200408.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,170 | INFO     | mean x: 1749046204.5
[2025-06-04 18:06:04] 2025-06-04 16:03:52,170 | INFO     | mean y: 2526113.1636363636
[2025-06-04 18:06:04] 2025-06-04 16:03:52,171 | INFO     | -- intersect: 23766294850.920723
[2025-06-04 18:06:04] 2025-06-04 16:03:52,171 | INFO     | intersect: 23766294850.920723
[2025-06-04 18:06:04] 2025-06-04 16:03:52,171 | INFO     | chi2: 2.8469680860002873
[2025-06-04 18:06:04] 2025-06-04 16:03:52,172 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,174 | INFO     | sum of deviations: -27880134301.999992
[2025-06-04 18:06:04] 2025-06-04 16:03:52,174 | INFO     | mean x: 1749046052.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,174 | INFO     | mean y: 2537684.353488372
[2025-06-04 18:06:04] 2025-06-04 16:03:52,174 | INFO     | -- intersect: 15826370929.764294
[2025-06-04 18:06:04] 2025-06-04 16:03:52,174 | INFO     | intersect: 15826370929.764294
[2025-06-04 18:06:04] 2025-06-04 16:03:52,175 | INFO     | chi2: 1.9812044699587357
[2025-06-04 18:06:04] 2025-06-04 16:03:52,175 | INFO     | current chi2=1.9812044699587357 (change=30.41002181580002 %)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,175 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:06:04] 2025-06-04 16:03:52,177 | INFO     | sum of deviations: -26532429246.499996
[2025-06-04 18:06:04] 2025-06-04 16:03:52,177 | INFO     | mean x: 1749045899.5
[2025-06-04 18:06:04] 2025-06-04 16:03:52,177 | INFO     | mean y: 2538663.0714285714
[2025-06-04 18:06:04] 2025-06-04 16:03:52,177 | INFO     | -- intersect: 16162925830.408499
[2025-06-04 18:06:04] 2025-06-04 16:03:52,178 | INFO     | intersect: 16162925830.408499
[2025-06-04 18:06:04] 2025-06-04 16:03:52,178 | INFO     | chi2: 1.9798120893538034
[2025-06-04 18:06:04] 2025-06-04 16:03:52,178 | INFO     | current chi2=1.9798120893538034 (change=0.07027950047787333 %)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,178 | INFO     | right removable region: 209
[2025-06-04 18:06:04] 2025-06-04 16:03:52,179 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,183 | INFO     | sum of deviations: -84393129974.00002
[2025-06-04 18:06:04] 2025-06-04 16:03:52,183 | INFO     | mean x: 1749046357.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,183 | INFO     | mean y: 2553285.395348837
[2025-06-04 18:06:04] 2025-06-04 16:03:52,183 | INFO     | -- intersect: 47901284122.68262
[2025-06-04 18:06:04] 2025-06-04 16:03:52,183 | INFO     | intersect: 47901284122.68262
[2025-06-04 18:06:04] 2025-06-04 16:03:52,184 | INFO     | chi2: 1.1365992384480907
[2025-06-04 18:06:04] 2025-06-04 16:03:52,184 | INFO     | current chi2=1.1365992384480907 (change=60.07685354685862 %)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,185 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:06:04] 2025-06-04 16:03:52,186 | INFO     | sum of deviations: -85449299193.50003
[2025-06-04 18:06:04] 2025-06-04 16:03:52,186 | INFO     | mean x: 1749046509.5
[2025-06-04 18:06:04] 2025-06-04 16:03:52,187 | INFO     | mean y: 2554016.595238095
[2025-06-04 18:06:04] 2025-06-04 16:03:52,187 | INFO     | -- intersect: 52048080150.59683
[2025-06-04 18:06:04] 2025-06-04 16:03:52,187 | INFO     | intersect: 52048080150.59683
[2025-06-04 18:06:04] 2025-06-04 16:03:52,187 | INFO     | chi2: 1.1010356907769885
[2025-06-04 18:06:04] 2025-06-04 16:03:52,187 | INFO     | current chi2=1.1010356907769885 (change=3.1289434717254094 %)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,188 | INFO     | left removable region: 20
[2025-06-04 18:06:04] 2025-06-04 16:03:52,188 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,189 | INFO     | sum of deviations: -55710985789.000015
[2025-06-04 18:06:04] 2025-06-04 16:03:52,190 | INFO     | mean x: 1749046479.0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,190 | INFO     | mean y: 2560216.703703704
[2025-06-04 18:06:04] 2025-06-04 16:03:52,190 | INFO     | -- intersect: 46549433735.00379
[2025-06-04 18:06:04] 2025-06-04 16:03:52,190 | INFO     | intersect: 46549433735.00379
[2025-06-04 18:06:04] 2025-06-04 16:03:52,190 | INFO     | chi2: 0.19238286299551394
[2025-06-04 18:06:04] 2025-06-04 16:03:52,191 | INFO     | -- intersect: 46549433735.00379
[2025-06-04 18:06:04] 2025-06-04 16:03:52,191 | INFO     | current memory leak: -26.61 B/s (using 189 data points, chi2=0.19)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | ..............................
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . Timing measurements:
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . get job = 0 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . initial setup = 2 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . payload setup = 16 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . stage-in = 0 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,192 | INFO     | . payload execution = 13427 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,193 | INFO     | . stage-out = 5 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,193 | INFO     | . log creation = 1 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,193 | INFO     | ..............................
[2025-06-04 18:06:04] 2025-06-04 16:03:52,369 | INFO     | 
[2025-06-04 18:06:04] 2025-06-04 16:03:52,369 | INFO     | job summary report
[2025-06-04 18:06:04] 2025-06-04 16:03:52,369 | INFO     | --------------------------------------------------
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | PanDA job id: 6677658999
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | task id: 45006595
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | errors: (none)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | pilot state: finished 
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | transexitcode: 0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | exeerrorcode: 0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | exeerrordiag: 
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | exitcode: 0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | exitmsg: OK
[2025-06-04 18:06:04] 2025-06-04 16:03:52,370 | INFO     | cpuconsumptiontime: 49412 s
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | nevents: 400
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | neventsw: 0
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | pid: 28760
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | pgrp: 28760
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | corecount: 8
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | event service: False
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | sizes: {0: 2396514, 1: 2397370, 2: 2397370, 10: 2397604, 12: 2397632, 13447: 2427224, 13448: 2427351, 13454: 2436348, 13457: 2436404, 13546: 2436574}
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | --------------------------------------------------
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | 
[2025-06-04 18:06:04] 2025-06-04 16:03:52,371 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:06:04] 2025-06-04 16:03:52,585 | INFO     | job 6677658999 has completed (purged errors)
[2025-06-04 18:06:04] 2025-06-04 16:03:52,585 | INFO     | overall cleanup function is called
[2025-06-04 18:06:04] 2025-06-04 16:03:53,594 | INFO     | --- collectZombieJob: --- 10, [28760]
[2025-06-04 18:06:04] 2025-06-04 16:03:53,594 | INFO     | zombie collector waiting for pid 28760
[2025-06-04 18:06:04] 2025-06-04 16:03:53,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:06:04] 2025-06-04 16:03:53,595 | INFO     | collected zombie processes
[2025-06-04 18:06:04] 2025-06-04 16:03:53,595 | INFO     | will attempt to kill all subprocesses of pid=28760
[2025-06-04 18:06:04] 2025-06-04 16:03:53,698 | INFO     | process IDs to be killed: [28760] (in reverse order)
[2025-06-04 18:06:04] 2025-06-04 16:03:54,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:06:04] 2025-06-04 16:03:54,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:06:04] 2025-06-04 16:03:54,196 | INFO     | did not find any defunct processes belonging to 28760
[2025-06-04 18:06:04] 2025-06-04 16:03:54,199 | INFO     | did not find any defunct processes belonging to 28760
[2025-06-04 18:06:04] 2025-06-04 16:03:54,199 | INFO     | ready for new job
[2025-06-04 18:06:04] 2025-06-04 16:03:54,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:06:04] 2025-06-04 16:03:54,201 | INFO     | **************************************
[2025-06-04 18:06:04] 2025-06-04 16:03:54,202 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:06:04] 2025-06-04 16:03:54,202 | INFO     | **************************************
[2025-06-04 18:06:04] 2025-06-04 16:03:54,202 | INFO     | 
[2025-06-04 18:06:04] 2025-06-04 16:03:54,202 | INFO     | pilot is running in a VM
[2025-06-04 18:06:04] 2025-06-04 16:03:54,202 | INFO     | architecture information:
[2025-06-04 18:06:04] 2025-06-04 16:03:54,205 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:06:04] 2025-06-04 16:03:54,293 | INFO     | cat /etc/os-release:
[2025-06-04 18:06:04] NAME="CentOS Linux"
[2025-06-04 18:06:04] VERSION="7 (Core)"
[2025-06-04 18:06:04] ID="centos"
[2025-06-04 18:06:04] ID_LIKE="rhel fedora"
[2025-06-04 18:06:04] VERSION_ID="7"
[2025-06-04 18:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:06:04] ANSI_COLOR="0;31"
[2025-06-04 18:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:06:04] HOME_URL="https://www.centos.org/"
[2025-06-04 18:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:06:04] 
[2025-06-04 18:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:06:04] 
[2025-06-04 18:06:04] 2025-06-04 16:03:54,293 | INFO     | **************************************
[2025-06-04 18:06:04] 2025-06-04 16:03:54,796 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 18:06:04] 2025-06-04 16:03:54,901 | INFO     | sufficient remaining disk space (497304993792 B)
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | INFO     | update_server=False
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:06:04] 2025-06-04 16:03:54,902 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:06:04] 2025-06-04 16:03:54,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:06:04] 2025-06-04 16:03:54,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:06:04] 2025-06-04 16:03:54,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:06:04] 2025-06-04 16:03:55,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:06:04] 2025-06-04 16:03:55,005 | INFO     | aborting loop
[2025-06-04 18:06:04] 2025-06-04 16:03:55,135 | INFO     | all data control threads have been joined
[2025-06-04 18:06:04] 2025-06-04 16:03:55,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:06:04] 2025-06-04 16:03:55,694 | INFO     | all job control threads have been joined
[2025-06-04 18:06:04] 2025-06-04 16:03:55,718 | INFO     | all payload control threads have been joined
[2025-06-04 18:06:04] 2025-06-04 16:03:55,908 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:55,977 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,010 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,076 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,141 | INFO     | [data] control thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,283 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,667 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,700 | INFO     | [job] control thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,724 | INFO     | [payload] control thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,738 | INFO     | [job] validate thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:56,910 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:57,064 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:57,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:57,372 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:57,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:06:04] 2025-06-04 16:03:58,388 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:03:59,515 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:06:04] 2025-06-04 16:04:00,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897212954432)>', '<ExcThread(monitor, started 139896916260608)>']
[2025-06-04 18:06:04] 2025-06-04 16:04:00,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:06:04] 2025-06-04 16:04:00,938 | INFO     | [monitor] control thread has ended
[2025-06-04 18:06:04] 2025-06-04 16:04:05,109 | INFO     | all workflow threads have been joined
[2025-06-04 18:06:04] 2025-06-04 16:04:05,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:06:04] 2025-06-04 16:04:05,110 | INFO     | traces error code: 0
[2025-06-04 18:06:04] 2025-06-04 16:04:05,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:06:04] 2025-06-04 16:04:05,406 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:06:04] 2025-06-04 16:04:05,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:06:04] 2025-06-04 16:04:05,446 [wrapper] pilotpid: 20214
[2025-06-04 18:06:04] 2025-06-04 16:04:05,537 [wrapper] Pilot exit status: 0
[2025-06-04 18:06:04] 2025-06-04 16:04:06,014 [wrapper] pandaids: 6677658999
[2025-06-04 18:06:04] 2025-06-04 16:04:06,601 [wrapper] cleanup supervisor_pilot 16819 20215
[2025-06-04 18:06:04] 2025-06-04 16:04:06,691 [wrapper] Test setup, not cleaning
[2025-06-04 18:06:04] 2025-06-04 16:04:06,802 [wrapper] apfmon messages muted
[2025-06-04 18:06:04] 2025-06-04 16:04:06,893 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:06:04] 2025-06-04 16:04:06,979 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:06:04]  *** Error codes and diagnostics ***
[2025-06-04 18:06:04]     "exeErrorCode": 0,
[2025-06-04 18:06:04]     "exeErrorDiag": "",
[2025-06-04 18:06:04]     "pilotErrorCode": 0,
[2025-06-04 18:06:04]     "pilotErrorDiag": "",
[2025-06-04 18:06:04]  *** Listing of results directory ***
[2025-06-04 18:06:04] total 391028
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-04 18:06:04] -rwx------. 1 boinc boinc     37140 Jun  3 16:23 runpilot2-wrapper.sh
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:23 queuedata.json
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:06:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:17 run_atlas
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:17 job.xml
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc 215261031 Jun  4 14:17 EVNT.45006593._001417.pool.root.1
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc      6391 Jun  4 14:17 init_data.xml
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:17 start_atlas.sh
[2025-06-04 18:06:04] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:17 shared
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc    508885 Jun  4 14:17 input.tar.gz
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:17 boinc_lockfile
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:17 pandaJob.out
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc    986811 Jun  4 14:17 agis_schedconf.cvmfs.json
[2025-06-04 18:06:04] drwx------. 4 boinc boinc      4096 Jun  4 14:17 pilot3
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc 178220611 Jun  4 18:01 HITS.45006595._035245.pool.root.1
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:01 boinc_task_state.xml
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc      1020 Jun  4 18:02 memory_monitor_summary.json
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc   1598969 Jun  4 18:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc    372944 Jun  4 18:02 log.45006595._035245.job.log.tgz.1
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc        95 Jun  4 18:03 pilot_heartbeat.json
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc      7696 Jun  4 18:03 heartbeat.json
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc      4539 Jun  4 18:04 pilotlog.txt
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc   1185101 Jun  4 18:04 log.45006595._035245.job.log.1
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc       357 Jun  4 18:04 output.list
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:04 runtime_log
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc   1576960 Jun  4 18:04 result.tar.gz
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:04 runtime_log.err
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc       657 Jun  4 18:04 70WMDmNjhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9XkKDm20FCKm.diag
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:06 boinc_mmap_file
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:06 wrapper_checkpoint.txt
[2025-06-04 18:06:04] -rw-r--r--. 1 boinc boinc     20506 Jun  4 18:06 stderr.txt
[2025-06-04 18:06:04] HITS file was successfully produced:
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc 178220611 Jun  4 18:01 shared/HITS.pool.root.1
[2025-06-04 18:06:04]  *** Contents of shared directory: ***
[2025-06-04 18:06:04] total 386316
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc 215261031 Jun  4 14:17 ATLAS.root_0
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:17 start_atlas.sh
[2025-06-04 18:06:04] -rw-r--r--. 2 boinc boinc    508885 Jun  4 14:17 input.tar.gz
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc 178220611 Jun  4 18:01 HITS.pool.root.1
[2025-06-04 18:06:04] -rw-------. 1 boinc boinc   1576960 Jun  4 18:04 result.tar.gz
18:06:06 (16550): run_atlas exited; CPU time 49588.368855
18:06:06 (16550): called boinc_finish(0)

</stderr_txt>
]]>

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