Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:53:54 (4042040): wrapper (7.7.26015): starting
12:53:54 (4042040): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:53:54] Arguments: --nthreads 8
[2025-06-03 12:53:54] Threads: 8
[2025-06-03 12:53:54] Checking for CVMFS
[2025-06-03 12:53:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:53:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:53:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:53:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:53:55] 2.12.6.0 1303481 22112 300228 146749 3 197 27325733 32935937 5053 16776704 0 68748335 99.644 72003055 34284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:53:55] CVMFS is ok
[2025-06-03 12:53:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:53:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:53:55] Further information can be found at the LHC@home message board.
[2025-06-03 12:53:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:53:55] Checking for apptainer binary...
[2025-06-03 12:53:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:53:55] Running /usr/bin/apptainer --version
[2025-06-03 12:53:55] apptainer version 1.4.1-1.el9
[2025-06-03 12:53:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:53:55] c6-6-39-4.aglt2.org
[2025-06-03 12:53:55] apptainer works
[2025-06-03 12:53:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:53:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:53:55] Starting ATLAS job with PandaID=6677675334
[2025-06-03 12:53:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:03:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:03:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 14:03:26]  is_altstaged=None
[2025-06-03 14:03:26]  is_tar=False
[2025-06-03 14:03:26]  lfn=log.45006595._035691.job.log.tgz.1
[2025-06-03 14:03:26]  mtime=0
[2025-06-03 14:03:26]  protocol_id=None
[2025-06-03 14:03:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:03:26]  replicas=None
[2025-06-03 14:03:26]  scope=mc23_13p6TeV
[2025-06-03 14:03:26]  status=None
[2025-06-03 14:03:26]  status_code=0
[2025-06-03 14:03:26]  storage_token=
[2025-06-03 14:03:26]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677675334/log.45006595._035691.job.log.tgz.1
[2025-06-03 14:03:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/cd/log.45006595._035691.job.log.tgz.1
[2025-06-03 14:03:26]  workdir=None
[2025-06-03 14:03:26] ]
[2025-06-03 14:03:26] 2025-06-03 18:03:05,368 | INFO     | transferring file log.45006595._035691.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677675334/log.45006595._035691.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:03:26] 2025-06-03 18:03:05,368 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677675334/log.45006595._035691.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._035691.job
[2025-06-03 14:03:26] 2025-06-03 18:03:05,385 | INFO     | adding to output.list: log.45006595._035691.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/cd/log.45006595._035691.job.log.tg
[2025-06-03 14:03:26] 2025-06-03 18:03:05,386 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:03:26] 2025-06-03 18:03:05,386 | INFO     | summary of transferred files:
[2025-06-03 14:03:26] 2025-06-03 18:03:05,386 | INFO     |  -- lfn=log.45006595._035691.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:03:26] 2025-06-03 18:03:05,386 | INFO     | stage-out finished correctly
[2025-06-03 14:03:26] 2025-06-03 18:03:05,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:03:26] 2025-06-03 18:03:08,045 | WARNING  | process 4053798 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 14:03:26] 2025-06-03 18:03:08,045 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677675334/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:03:26] 2025-06-03 18:03:08,117 | INFO     | job 6677675334 has state=finished
[2025-06-03 14:03:26] 2025-06-03 18:03:08,117 | INFO     | preparing for final server update for job 6677675334 in state='finished'
[2025-06-03 14:03:26] 2025-06-03 18:03:08,118 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:03:26] 2025-06-03 18:03:08,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:03:26] 2025-06-03 18:03:08,118 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:03:26] 2025-06-03 18:03:08,119 | INFO     | job 6677675334 has finished - writing final server update
[2025-06-03 14:03:26] 2025-06-03 18:03:08,119 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:03:26] 2025-06-03 18:03:08,135 | INFO     | executing command: lscpu
[2025-06-03 14:03:26] 2025-06-03 18:03:08,208 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:03:26] 2025-06-03 18:03:08,282 | INFO     | number of running child processes to parent process 4053798: 1
[2025-06-03 14:03:26] 2025-06-03 18:03:08,282 | INFO     | maximum number of monitored processes: 6
[2025-06-03 14:03:26] 2025-06-03 18:03:10,578 | INFO     | 4149s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 14:03:26] 2025-06-03 18:03:10,785 | INFO     | monitor loop #311: job 0:6677675334 is in state 'finished'
[2025-06-03 14:03:26] 2025-06-03 18:03:10,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,803 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:03:26] 2025-06-03 18:03:11,804 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677675334/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,805 | INFO     | extracted standard info from prmon json
[2025-06-03 14:03:26] 2025-06-03 18:03:11,805 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:03:26] 2025-06-03 18:03:11,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:03:26] 2025-06-03 18:03:11,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:03:26] 2025-06-03 18:03:11,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | sum of square deviations: 70364110.0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | sum of deviations: 7806931158.0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | mean x: 1748971804.0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | mean y: 2122450.4426229508
[2025-06-03 14:03:26] 2025-06-03 18:03:11,806 | INFO     | -- intersect: -194047123267.45346
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | intersect: -194047123267.45346
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | chi2: 0.8608975912802818
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | -- intersect: -194047123267.45346
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | current memory leak: 110.95 B/s (using 61 data points, chi2=0.86)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | ..............................
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . Timing measurements:
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . get job = 0 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . initial setup = 2 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . payload setup = 5 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . stage-in = 0 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . payload execution = 4115 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . stage-out = 0 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | . log creation = 0 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,807 | INFO     | ..............................
[2025-06-03 14:03:26] 2025-06-03 18:03:11,854 | INFO     | 
[2025-06-03 14:03:26] 2025-06-03 18:03:11,854 | INFO     | job summary report
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | --------------------------------------------------
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | PanDA job id: 6677675334
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | task id: 45006595
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | errors: (none)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | pilot state: finished 
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | transexitcode: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | exeerrorcode: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | exeerrordiag: 
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | exitcode: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | exitmsg: OK
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | cpuconsumptiontime: 27515 s
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | nevents: 400
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | neventsw: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:11,855 | INFO     | pid: 4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | pgrp: 4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | corecount: 8
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | event service: False
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4125: 2431296, 4127: 2440293, 4133: 2440407}
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | --------------------------------------------------
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | 
[2025-06-03 14:03:26] 2025-06-03 18:03:11,856 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 14:03:26] 2025-06-03 18:03:11,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:03:26] 2025-06-03 18:03:11,872 | INFO     | job 6677675334 has completed (purged errors)
[2025-06-03 14:03:26] 2025-06-03 18:03:11,872 | INFO     | overall cleanup function is called
[2025-06-03 14:03:26] 2025-06-03 18:03:12,879 | INFO     | --- collectZombieJob: --- 10, [4053798]
[2025-06-03 14:03:26] 2025-06-03 18:03:12,880 | INFO     | zombie collector waiting for pid 4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:12,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:03:26] 2025-06-03 18:03:12,880 | INFO     | collected zombie processes
[2025-06-03 14:03:26] 2025-06-03 18:03:12,880 | INFO     | will attempt to kill all subprocesses of pid=4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:13,107 | INFO     | process IDs to be killed: [4053798] (in reverse order)
[2025-06-03 14:03:26] 2025-06-03 18:03:13,181 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:03:26] 2025-06-03 18:03:13,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:03:26] 2025-06-03 18:03:13,189 | INFO     | did not find any defunct processes belonging to 4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:13,197 | INFO     | did not find any defunct processes belonging to 4053798
[2025-06-03 14:03:26] 2025-06-03 18:03:13,197 | INFO     | ready for new job
[2025-06-03 14:03:26] 2025-06-03 18:03:13,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:03:26] 2025-06-03 18:03:13,199 | INFO     | **************************************
[2025-06-03 14:03:26] 2025-06-03 18:03:13,199 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:03:26] 2025-06-03 18:03:13,199 | INFO     | **************************************
[2025-06-03 14:03:26] 2025-06-03 18:03:13,199 | INFO     | 
[2025-06-03 14:03:26] 2025-06-03 18:03:13,214 | INFO     | architecture information:
[2025-06-03 14:03:26] 2025-06-03 18:03:13,215 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:03:26] 2025-06-03 18:03:13,229 | INFO     | cat /etc/os-release:
[2025-06-03 14:03:26] NAME="CentOS Linux"
[2025-06-03 14:03:26] VERSION="7 (Core)"
[2025-06-03 14:03:26] ID="centos"
[2025-06-03 14:03:26] ID_LIKE="rhel fedora"
[2025-06-03 14:03:26] VERSION_ID="7"
[2025-06-03 14:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:03:26] ANSI_COLOR="0;31"
[2025-06-03 14:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:03:26] HOME_URL="https://www.centos.org/"
[2025-06-03 14:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:03:26] 
[2025-06-03 14:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:03:26] 
[2025-06-03 14:03:26] 2025-06-03 18:03:13,229 | INFO     | **************************************
[2025-06-03 14:03:26] 2025-06-03 18:03:13,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 14:03:26] 2025-06-03 18:03:13,747 | INFO     | sufficient remaining disk space (73577529344 B)
[2025-06-03 14:03:26] 2025-06-03 18:03:13,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:03:26] 2025-06-03 18:03:13,747 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:03:26] 2025-06-03 18:03:13,747 | INFO     | update_server=False
[2025-06-03 14:03:26] 2025-06-03 18:03:13,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:03:26] 2025-06-03 18:03:13,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:03:26] 2025-06-03 18:03:13,748 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:03:26] 2025-06-03 18:03:13,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:03:26] 2025-06-03 18:03:13,749 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:03:26] 2025-06-03 18:03:13,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:03:26] 2025-06-03 18:03:13,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:03:26] 2025-06-03 18:03:14,038 | INFO     | all data control threads have been joined
[2025-06-03 14:03:26] 2025-06-03 18:03:14,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:03:26] 2025-06-03 18:03:14,294 | INFO     | aborting loop
[2025-06-03 14:03:26] 2025-06-03 18:03:14,753 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:14,754 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:14,894 | INFO     | all job control threads have been joined
[2025-06-03 14:03:26] 2025-06-03 18:03:15,007 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,014 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,044 | INFO     | [data] control thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,046 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,192 | INFO     | all payload control threads have been joined
[2025-06-03 14:03:26] 2025-06-03 18:03:15,299 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,570 | INFO     | [job] validate thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,751 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,766 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,777 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:15,899 | INFO     | [job] control thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:16,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:03:26] 2025-06-03 18:03:16,198 | INFO     | [payload] control thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:20,077 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:03:26] 2025-06-03 18:03:21,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414092519232)>', '<ExcThread(monitor, started 140413469972224)>']
[2025-06-03 14:03:26] 2025-06-03 18:03:21,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:03:26] 2025-06-03 18:03:21,790 | INFO     | [monitor] control thread has ended
[2025-06-03 14:03:26] 2025-06-03 18:03:26,442 | INFO     | all workflow threads have been joined
[2025-06-03 14:03:26] 2025-06-03 18:03:26,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:03:26] 2025-06-03 18:03:26,443 | INFO     | traces error code: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:26,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:03:26] 2025-06-03 18:03:26,601 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:03:26] 2025-06-03 18:03:26,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:03:26] 2025-06-03 18:03:26,607 [wrapper] pilotpid: 4045627
[2025-06-03 14:03:26] 2025-06-03 18:03:26,609 [wrapper] Pilot exit status: 0
[2025-06-03 14:03:26] 2025-06-03 18:03:26,619 [wrapper] pandaids: 6677675334
[2025-06-03 14:03:26] 2025-06-03 18:03:26,669 [wrapper] cleanup supervisor_pilot   53957 4045628
[2025-06-03 14:03:26] 2025-06-03 18:03:26,672 [wrapper] Test setup, not cleaning
[2025-06-03 14:03:26] 2025-06-03 18:03:26,675 [wrapper] apfmon messages muted
[2025-06-03 14:03:26] 2025-06-03 18:03:26,678 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:03:26] 2025-06-03 18:03:26,680 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:03:26]  *** Error codes and diagnostics ***
[2025-06-03 14:03:26]     "exeErrorCode": 0,
[2025-06-03 14:03:26]     "exeErrorDiag": "",
[2025-06-03 14:03:26]     "pilotErrorCode": 0,
[2025-06-03 14:03:26]     "pilotErrorDiag": "",
[2025-06-03 14:03:26]  *** Listing of results directory ***
[2025-06-03 14:03:26] total 394860
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:31 pilot3.tar.gz
[2025-06-03 14:03:26] -rwx------. 1 boincer umatlas     37140 Jun  3 10:33 runpilot2-wrapper.sh
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:33 queuedata.json
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:03:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:53 run_atlas
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:53 job.xml
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas 214718652 Jun  3 12:53 EVNT.45006593._001434.pool.root.1
[2025-06-03 14:03:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:53 shared
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 12:53 input.tar.gz
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:53 boinc_lockfile
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:53 pandaJob.out
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas    983734 Jun  3 12:54 agis_schedconf.cvmfs.json
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:03:26] drwx------. 4 boincer umatlas      4096 Jun  3 12:54 pilot3
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas 184350510 Jun  3 14:02 HITS.45006595._035691.pool.root.1
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:02 boinc_task_state.xml
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 14:02 init_data.xml
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas      1032 Jun  3 14:03 memory_monitor_summary.json
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas    302009 Jun  3 14:03 log.45006595._035691.job.log.tgz.1
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas        95 Jun  3 14:03 pilot_heartbeat.json
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas      7713 Jun  3 14:03 heartbeat.json
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:03 wrapper_checkpoint.txt
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:03 boinc_mmap_file
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas      4476 Jun  3 14:03 pilotlog.txt
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas    417188 Jun  3 14:03 log.45006595._035691.job.log.1
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas       357 Jun  3 14:03 output.list
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:03 runtime_log
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas    737280 Jun  3 14:03 result.tar.gz
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas       651 Jun  3 14:03 Z9BLDmBthg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8ZkKDmZu3ifm.diag
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 14:03 runtime_log.err
[2025-06-03 14:03:26] -rw-r--r--. 1 boincer umatlas     21398 Jun  3 14:03 stderr.txt
[2025-06-03 14:03:26] HITS file was successfully produced:
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas 184350510 Jun  3 14:02 shared/HITS.pool.root.1
[2025-06-03 14:03:26]  *** Contents of shared directory: ***
[2025-06-03 14:03:26] total 390960
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas 214718652 Jun  3 12:53 ATLAS.root_0
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 12:53 input.tar.gz
[2025-06-03 14:03:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas 184350510 Jun  3 14:02 HITS.pool.root.1
[2025-06-03 14:03:26] -rw-------. 1 boincer umatlas    737280 Jun  3 14:03 result.tar.gz
14:03:27 (4042040): run_atlas exited; CPU time 27612.054069
14:03:27 (4042040): called boinc_finish(0)

</stderr_txt>
]]>

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