Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:53:40 (3482255): wrapper (7.7.26015): starting
12:53:40 (3482255): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:53:40] Arguments: --nthreads 8
[2025-06-03 12:53:40] Threads: 8
[2025-06-03 12:53:40] Checking for CVMFS
[2025-06-03 12:53:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:53:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:53:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:53:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:53:40] 2.12.6.0 3646663 90644 333276 146749 3 187 21109835 32935936 2838 16776704 1 376677356 99.633 367937638 25217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:53:40] CVMFS is ok
[2025-06-03 12:53:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:53:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:53:40] Further information can be found at the LHC@home message board.
[2025-06-03 12:53:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:53:40] Checking for apptainer binary...
[2025-06-03 12:53:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:53:40] Running /usr/bin/apptainer --version
[2025-06-03 12:53:40] apptainer version 1.4.1-1.el9
[2025-06-03 12:53:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:53:40] c-5-2.aglt2.org
[2025-06-03 12:53:40] apptainer works
[2025-06-03 12:53:40] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:53:40] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:53:40] Starting ATLAS job with PandaID=6677658133
[2025-06-03 12:53:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:14:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:14:11]  lfn=log.45006595._034931.job.log.tgz.1
[2025-06-03 14:14:11]  mtime=0
[2025-06-03 14:14:11]  protocol_id=None
[2025-06-03 14:14:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:14:11]  replicas=None
[2025-06-03 14:14:11]  scope=mc23_13p6TeV
[2025-06-03 14:14:11]  status=None
[2025-06-03 14:14:11]  status_code=0
[2025-06-03 14:14:11]  storage_token=
[2025-06-03 14:14:11]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677658133/log.45006595._034931.job.log.tgz.1
[2025-06-03 14:14:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/cd/log.45006595._034931.job.log.tgz.1
[2025-06-03 14:14:11]  workdir=None
[2025-06-03 14:14:11] ]
[2025-06-03 14:14:11] 2025-06-03 18:13:42,394 | INFO     | transferring file log.45006595._034931.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677658133/log.45006595._034931.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:14:11] 2025-06-03 18:13:42,394 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677658133/log.45006595._034931.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._034931.job
[2025-06-03 14:14:11] 2025-06-03 18:13:42,429 | INFO     | adding to output.list: log.45006595._034931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/cd/log.45006595._034931.job.log.tg
[2025-06-03 14:14:11] 2025-06-03 18:13:42,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:14:11] 2025-06-03 18:13:42,430 | INFO     | summary of transferred files:
[2025-06-03 14:14:11] 2025-06-03 18:13:42,430 | INFO     |  -- lfn=log.45006595._034931.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:14:11] 2025-06-03 18:13:42,430 | INFO     | stage-out finished correctly
[2025-06-03 14:14:11] 2025-06-03 18:13:44,052 | INFO     | monitor loop #359: job 0:6677658133 is in state 'finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:44,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:14:11] 2025-06-03 18:13:45,869 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:14:11] 2025-06-03 18:13:46,557 | INFO     | monitor loop #360: job 0:6677658133 is in state 'finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:46,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:14:11] 2025-06-03 18:13:48,280 | INFO     | job 6677658133 has state=finished
[2025-06-03 14:14:11] 2025-06-03 18:13:48,281 | INFO     | preparing for final server update for job 6677658133 in state='finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:48,284 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:14:11] 2025-06-03 18:13:48,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:14:11] 2025-06-03 18:13:48,285 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:14:11] 2025-06-03 18:13:48,285 | INFO     | job 6677658133 has finished - writing final server update
[2025-06-03 14:14:11] 2025-06-03 18:13:48,286 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:14:11] 2025-06-03 18:13:48,289 | INFO     | executing command: lscpu
[2025-06-03 14:14:11] 2025-06-03 18:13:48,334 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:14:11] 2025-06-03 18:13:49,068 | INFO     | monitor loop #361: job 0:6677658133 is in state 'finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:49,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:14:11] 2025-06-03 18:13:51,572 | INFO     | monitor loop #362: job 0:6677658133 is in state 'finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:51,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:14:11] 2025-06-03 18:13:54,077 | INFO     | monitor loop #363: job 0:6677658133 is in state 'finished'
[2025-06-03 14:14:11] 2025-06-03 18:13:54,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,183 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 14:14:11] 2025-06-03 18:13:55,184 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677658133/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,185 | INFO     | extracted standard info from prmon json
[2025-06-03 14:14:11] 2025-06-03 18:13:55,186 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:14:11] 2025-06-03 18:13:55,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:14:11] 2025-06-03 18:13:55,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:14:11] 2025-06-03 18:13:55,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:14:11] 2025-06-03 18:13:55,204 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:14:11] 2025-06-03 18:13:55,204 | INFO     | sum of square deviations: 115715658.0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,204 | INFO     | sum of deviations: 7116566403.0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | mean x: 1748972122.5
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | mean y: 2141794.8333333335
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | -- intersect: -107560451391.70932
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | intersect: -107560451391.70932
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | chi2: 0.8725122939088483
[2025-06-03 14:14:11] 2025-06-03 18:13:55,209 | INFO     | -- intersect: -107560451391.70932
[2025-06-03 14:14:11] 2025-06-03 18:13:55,210 | INFO     | current memory leak: 61.50 B/s (using 72 data points, chi2=0.87)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,210 | INFO     | ..............................
[2025-06-03 14:14:11] 2025-06-03 18:13:55,210 | INFO     | . Timing measurements:
[2025-06-03 14:14:11] 2025-06-03 18:13:55,210 | INFO     | . get job = 0 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,210 | INFO     | . initial setup = 2 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | . payload setup = 5 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | . stage-in = 0 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | . payload execution = 4768 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | . stage-out = 0 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | . log creation = 0 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,211 | INFO     | ..............................
[2025-06-03 14:14:11] 2025-06-03 18:13:55,362 | INFO     | 
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | job summary report
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | --------------------------------------------------
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | PanDA job id: 6677658133
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | task id: 45006595
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | errors: (none)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:14:11] 2025-06-03 18:13:55,363 | INFO     | pilot state: finished 
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | transexitcode: 0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | exeerrorcode: 0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | exeerrordiag: 
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | exitcode: 0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | exitmsg: OK
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | cpuconsumptiontime: 32757 s
[2025-06-03 14:14:11] 2025-06-03 18:13:55,364 | INFO     | nevents: 400
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | neventsw: 0
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | pid: 3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | pgrp: 3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | corecount: 8
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | event service: False
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 4778: 2431585, 4780: 2440526, 4784: 2440582, 4793: 2440880}
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | --------------------------------------------------
[2025-06-03 14:14:11] 2025-06-03 18:13:55,365 | INFO     | 
[2025-06-03 14:14:11] 2025-06-03 18:13:55,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 14:14:11] 2025-06-03 18:13:55,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,398 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,398 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:14:11] 2025-06-03 18:13:55,400 | INFO     | job 6677658133 has completed (purged errors)
[2025-06-03 14:14:11] 2025-06-03 18:13:55,401 | INFO     | overall cleanup function is called
[2025-06-03 14:14:11] 2025-06-03 18:13:56,409 | INFO     | --- collectZombieJob: --- 10, [3492461]
[2025-06-03 14:14:11] 2025-06-03 18:13:56,410 | INFO     | zombie collector waiting for pid 3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:56,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:14:11] 2025-06-03 18:13:56,410 | INFO     | collected zombie processes
[2025-06-03 14:14:11] 2025-06-03 18:13:56,410 | INFO     | will attempt to kill all subprocesses of pid=3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:57,057 | INFO     | process IDs to be killed: [3492461] (in reverse order)
[2025-06-03 14:14:11] 2025-06-03 18:13:57,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:14:11] 2025-06-03 18:13:57,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:14:11] 2025-06-03 18:13:57,208 | INFO     | did not find any defunct processes belonging to 3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:57,234 | INFO     | did not find any defunct processes belonging to 3492461
[2025-06-03 14:14:11] 2025-06-03 18:13:57,234 | INFO     | ready for new job
[2025-06-03 14:14:11] 2025-06-03 18:13:57,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:14:11] 2025-06-03 18:13:57,236 | INFO     | **************************************
[2025-06-03 14:14:11] 2025-06-03 18:13:57,236 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:14:11] 2025-06-03 18:13:57,236 | INFO     | **************************************
[2025-06-03 14:14:11] 2025-06-03 18:13:57,236 | INFO     | 
[2025-06-03 14:14:11] 2025-06-03 18:13:57,255 | INFO     | architecture information:
[2025-06-03 14:14:11] 2025-06-03 18:13:57,260 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:14:11] 2025-06-03 18:13:57,295 | INFO     | cat /etc/os-release:
[2025-06-03 14:14:11] NAME="CentOS Linux"
[2025-06-03 14:14:11] VERSION="7 (Core)"
[2025-06-03 14:14:11] ID="centos"
[2025-06-03 14:14:11] ID_LIKE="rhel fedora"
[2025-06-03 14:14:11] VERSION_ID="7"
[2025-06-03 14:14:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:14:11] ANSI_COLOR="0;31"
[2025-06-03 14:14:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:14:11] HOME_URL="https://www.centos.org/"
[2025-06-03 14:14:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:14:11] 
[2025-06-03 14:14:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:14:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:14:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:14:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:14:11] 
[2025-06-03 14:14:11] 2025-06-03 18:13:57,296 | INFO     | **************************************
[2025-06-03 14:14:11] 2025-06-03 18:13:57,800 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 14:14:11] 2025-06-03 18:13:57,836 | INFO     | sufficient remaining disk space (74601988096 B)
[2025-06-03 14:14:11] 2025-06-03 18:13:57,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:14:11] 2025-06-03 18:13:57,837 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:14:11] 2025-06-03 18:13:57,837 | INFO     | update_server=False
[2025-06-03 14:14:11] 2025-06-03 18:13:57,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:14:11] 2025-06-03 18:13:57,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:14:11] 2025-06-03 18:13:57,839 | INFO     | aborting loop
[2025-06-03 14:14:11] 2025-06-03 18:13:57,839 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:14:11] 2025-06-03 18:13:57,840 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:14:11] 2025-06-03 18:13:57,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:14:11] 2025-06-03 18:13:57,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:14:11] 2025-06-03 18:13:57,959 | INFO     | all job control threads have been joined
[2025-06-03 14:14:11] 2025-06-03 18:13:58,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:14:11] 2025-06-03 18:13:58,729 | INFO     | all payload control threads have been joined
[2025-06-03 14:14:11] 2025-06-03 18:13:58,794 | INFO     | all data control threads have been joined
[2025-06-03 14:14:11] 2025-06-03 18:13:58,845 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:58,849 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:58,866 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:58,964 | INFO     | [job] control thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,051 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,078 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,307 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,734 | INFO     | [payload] control thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:13:59,799 | INFO     | [data] control thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:00,073 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:00,120 | INFO     | [job] validate thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:00,250 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:00,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:14:11] 2025-06-03 18:14:00,381 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:01,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:14:11] 2025-06-03 18:14:01,380 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:05,023 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:14:11] 2025-06-03 18:14:05,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138630809408)>', '<ExcThread(monitor, started 140137996478208)>']
[2025-06-03 14:14:11] 2025-06-03 18:14:05,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:14:11] 2025-06-03 18:14:05,891 | INFO     | [monitor] control thread has ended
[2025-06-03 14:14:11] 2025-06-03 18:14:10,531 | INFO     | all workflow threads have been joined
[2025-06-03 14:14:11] 2025-06-03 18:14:10,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:14:11] 2025-06-03 18:14:10,532 | INFO     | traces error code: 0
[2025-06-03 14:14:11] 2025-06-03 18:14:10,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:14:11] 2025-06-03 18:14:10,714 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:14:11] 2025-06-03 18:14:10,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:14:11] 2025-06-03 18:14:10,719 [wrapper] pilotpid: 3485906
[2025-06-03 14:14:11] 2025-06-03 18:14:10,721 [wrapper] Pilot exit status: 0
[2025-06-03 14:14:11] 2025-06-03 18:14:10,738 [wrapper] pandaids: 6677658133
[2025-06-03 14:14:11] 2025-06-03 18:14:10,804 [wrapper] cleanup supervisor_pilot 3709240 3485907
[2025-06-03 14:14:11] 2025-06-03 18:14:10,818 [wrapper] Test setup, not cleaning
[2025-06-03 14:14:11] 2025-06-03 18:14:10,823 [wrapper] apfmon messages muted
[2025-06-03 14:14:11] 2025-06-03 18:14:10,837 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:14:11] 2025-06-03 18:14:10,849 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:14:11]  *** Error codes and diagnostics ***
[2025-06-03 14:14:11]     "exeErrorCode": 0,
[2025-06-03 14:14:11]     "exeErrorDiag": "",
[2025-06-03 14:14:11]     "pilotErrorCode": 0,
[2025-06-03 14:14:11]     "pilotErrorDiag": "",
[2025-06-03 14:14:11]  *** Listing of results directory ***
[2025-06-03 14:14:11] total 387612
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:07 queuedata.json
[2025-06-03 14:14:11] -rwx------. 1 boincer umatlas     37140 Jun  3 10:07 runpilot2-wrapper.sh
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:14:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:53 run_atlas
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:53 job.xml
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas 214245781 Jun  3 12:53 EVNT.45006593._001404.pool.root.1
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 14:14:11] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:53 shared
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 12:53 input.tar.gz
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:53 boinc_lockfile
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 12:53 pandaJob.out
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas    983734 Jun  3 12:53 agis_schedconf.cvmfs.json
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:14:11] drwx------. 4 boincer umatlas      4096 Jun  3 12:53 pilot3
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 14:09 init_data.xml
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas 177271244 Jun  3 14:13 HITS.45006595._034931.pool.root.1
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:13 boinc_task_state.xml
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas        95 Jun  3 14:13 pilot_heartbeat.json
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas      1032 Jun  3 14:13 memory_monitor_summary.json
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas    310270 Jun  3 14:13 log.45006595._034931.job.log.tgz.1
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas      7703 Jun  3 14:13 heartbeat.json
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:14 wrapper_checkpoint.txt
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:14 boinc_mmap_file
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas      4476 Jun  3 14:14 pilotlog.txt
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas    474244 Jun  3 14:14 log.45006595._034931.job.log.1
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas       357 Jun  3 14:14 output.list
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:14 runtime_log
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas    798720 Jun  3 14:14 result.tar.gz
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 14:14 runtime_log.err
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas       648 Jun  3 14:14 Qo7NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLUkKDmbykBOn.diag
[2025-06-03 14:14:11] -rw-r--r--. 1 boincer umatlas     21629 Jun  3 14:14 stderr.txt
[2025-06-03 14:14:11] HITS file was successfully produced:
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas 177271244 Jun  3 14:13 shared/HITS.pool.root.1
[2025-06-03 14:14:11]  *** Contents of shared directory: ***
[2025-06-03 14:14:11] total 383648
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas 214245781 Jun  3 12:53 ATLAS.root_0
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 14:14:11] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 12:53 input.tar.gz
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas 177271244 Jun  3 14:13 HITS.pool.root.1
[2025-06-03 14:14:11] -rw-------. 1 boincer umatlas    798720 Jun  3 14:14 result.tar.gz
14:14:12 (3482255): run_atlas exited; CPU time 32883.849154
14:14:12 (3482255): called boinc_finish(0)

</stderr_txt>
]]>

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