Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:47:29 (18403): wrapper (7.7.26015): starting
12:47:29 (18403): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 12:47:29] Arguments: --nthreads 4
[2025-06-03 12:47:29] Threads: 4
[2025-06-03 12:47:29] Checking for CVMFS
[2025-06-03 12:47:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:47:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:47:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:47:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:47:29] 2.11.2.0 2857 34501 94972 146749 3 61 14088033 20275200 1 130560 0 11584840 99.959 6851186 8076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 12:47:29] CVMFS is ok
[2025-06-03 12:47:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:47:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:47:29] Further information can be found at the LHC@home message board.
[2025-06-03 12:47:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:47:29] Checking for apptainer binary...
[2025-06-03 12:47:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:47:29] Running /usr/bin/apptainer --version
[2025-06-03 12:47:29] apptainer version 1.3.2-1.el7
[2025-06-03 12:47:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:47:30] c-204-22.aglt2.org
[2025-06-03 12:47:30] apptainer works
[2025-06-03 12:47:30] Set ATHENA_PROC_NUMBER=4
[2025-06-03 12:47:30] Set ATHENA_CORE_NUMBER=4
[2025-06-03 12:47:30] Starting ATLAS job with PandaID=6677660463
[2025-06-03 12:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:13:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:13:21] 2025-06-03 20:13:05,618 | INFO     | extracted standard info from prmon json
[2025-06-03 16:13:21] 2025-06-03 20:13:05,618 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:13:21] 2025-06-03 20:13:05,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:13:21] 2025-06-03 20:13:05,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:13:21] 2025-06-03 20:13:05,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:13:21] 2025-06-03 20:13:05,625 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:13:21] 2025-06-03 20:13:05,625 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 16:13:21] 2025-06-03 20:13:05,627 | INFO     | sum of deviations: -19068792272.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,627 | INFO     | mean x: 1748975419.5
[2025-06-03 16:13:21] 2025-06-03 20:13:05,627 | INFO     | mean y: 2310547.079207921
[2025-06-03 16:13:21] 2025-06-03 20:13:05,627 | INFO     | -- intersect: 13051544121.226767
[2025-06-03 16:13:21] 2025-06-03 20:13:05,628 | INFO     | intersect: 13051544121.226767
[2025-06-03 16:13:21] 2025-06-03 20:13:05,628 | INFO     | chi2: 2.2448049528830274
[2025-06-03 16:13:21] 2025-06-03 20:13:05,629 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,630 | INFO     | sum of deviations: -6516158469.999998
[2025-06-03 16:13:21] 2025-06-03 20:13:05,630 | INFO     | mean x: 1748975267.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,631 | INFO     | mean y: 2320684.776649746
[2025-06-03 16:13:21] 2025-06-03 20:13:05,631 | INFO     | -- intersect: 4809711106.44727
[2025-06-03 16:13:21] 2025-06-03 20:13:05,631 | INFO     | intersect: 4809711106.44727
[2025-06-03 16:13:21] 2025-06-03 20:13:05,631 | INFO     | chi2: 1.4869740637566125
[2025-06-03 16:13:21] 2025-06-03 20:13:05,631 | INFO     | current chi2=1.4869740637566125 (change=33.75932007603264 %)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,632 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | sum of deviations: -6444660797.000003
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | mean x: 1748975114.5
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | mean y: 2320746.7604166665
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | -- intersect: 5138182976.100522
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | intersect: 5138182976.100522
[2025-06-03 16:13:21] 2025-06-03 20:13:05,633 | INFO     | chi2: 1.4858900104530943
[2025-06-03 16:13:21] 2025-06-03 20:13:05,634 | INFO     | current chi2=1.4858900104530943 (change=0.07290330947531351 %)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,634 | INFO     | right removable region: 191
[2025-06-03 16:13:21] 2025-06-03 20:13:05,634 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,635 | INFO     | sum of deviations: -41879529869.99998
[2025-06-03 16:13:21] 2025-06-03 20:13:05,635 | INFO     | mean x: 1748975572.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,635 | INFO     | mean y: 2329053.010152284
[2025-06-03 16:13:21] 2025-06-03 20:13:05,636 | INFO     | -- intersect: 30899565023.826916
[2025-06-03 16:13:21] 2025-06-03 20:13:05,636 | INFO     | intersect: 30899565023.826916
[2025-06-03 16:13:21] 2025-06-03 20:13:05,636 | INFO     | chi2: 0.979688180992691
[2025-06-03 16:13:21] 2025-06-03 20:13:05,636 | INFO     | current chi2=0.979688180992691 (change=56.35753655414619 %)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,636 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,637 | INFO     | sum of deviations: -34987860432.50001
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | mean x: 1748975724.5
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | mean y: 2323075.3177083335
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | -- intersect: 27884767041.46687
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | intersect: 27884767041.46687
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | chi2: 0.9609124725818659
[2025-06-03 16:13:21] 2025-06-03 20:13:05,638 | INFO     | current chi2=0.9609124725818659 (change=1.9164984099124471 %)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,639 | INFO     | left removable region: 20
[2025-06-03 16:13:21] 2025-06-03 20:13:05,639 | INFO     | sum of square deviations: 1550429070.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,640 | INFO     | sum of deviations: -7959281769.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,640 | INFO     | mean x: 1748975694.0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,640 | INFO     | mean y: 2319579.777777778
[2025-06-03 16:13:21] 2025-06-03 20:13:05,640 | INFO     | -- intersect: 8980860181.88241
[2025-06-03 16:13:21] 2025-06-03 20:13:05,640 | INFO     | intersect: 8980860181.88241
[2025-06-03 16:13:21] 2025-06-03 20:13:05,641 | INFO     | chi2: 0.09775715666133084
[2025-06-03 16:13:21] 2025-06-03 20:13:05,641 | INFO     | -- intersect: 8980860181.88241
[2025-06-03 16:13:21] 2025-06-03 20:13:05,641 | INFO     | current memory leak: -5.13 B/s (using 171 data points, chi2=0.10)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,641 | INFO     | ..............................
[2025-06-03 16:13:21] 2025-06-03 20:13:05,641 | INFO     | . Timing measurements:
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . get job = 0 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . initial setup = 2 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . payload setup = 7 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . stage-in = 0 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . payload execution = 12284 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . stage-out = 2 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | . log creation = 0 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,642 | INFO     | ..............................
[2025-06-03 16:13:21] 2025-06-03 20:13:05,739 | INFO     | 
[2025-06-03 16:13:21] 2025-06-03 20:13:05,740 | INFO     | job summary report
[2025-06-03 16:13:21] 2025-06-03 20:13:05,740 | INFO     | --------------------------------------------------
[2025-06-03 16:13:21] 2025-06-03 20:13:05,740 | INFO     | PanDA job id: 6677660463
[2025-06-03 16:13:21] 2025-06-03 20:13:05,740 | INFO     | task id: 45006595
[2025-06-03 16:13:21] 2025-06-03 20:13:05,740 | INFO     | errors: (none)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | pilot state: finished 
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | transexitcode: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | exeerrorcode: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | exeerrordiag: 
[2025-06-03 16:13:21] 2025-06-03 20:13:05,741 | INFO     | exitcode: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | exitmsg: OK
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | cpuconsumptiontime: 47993 s
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | nevents: 400
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | neventsw: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | pid: 28585
[2025-06-03 16:13:21] 2025-06-03 20:13:05,742 | INFO     | pgrp: 28585
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | corecount: 4
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | event service: False
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 12296: 2435035, 12299: 2444032, 12309: 2444146}
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | --------------------------------------------------
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | 
[2025-06-03 16:13:21] 2025-06-03 20:13:05,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 16:13:21] 2025-06-03 20:13:05,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:13:21] 2025-06-03 20:13:05,775 | INFO     | job 6677660463 has completed (purged errors)
[2025-06-03 16:13:21] 2025-06-03 20:13:05,776 | INFO     | overall cleanup function is called
[2025-06-03 16:13:21] 2025-06-03 20:13:06,783 | INFO     | --- collectZombieJob: --- 10, [28585]
[2025-06-03 16:13:21] 2025-06-03 20:13:06,784 | INFO     | zombie collector waiting for pid 28585
[2025-06-03 16:13:21] 2025-06-03 20:13:06,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:13:21] 2025-06-03 20:13:06,784 | INFO     | collected zombie processes
[2025-06-03 16:13:21] 2025-06-03 20:13:06,784 | INFO     | will attempt to kill all subprocesses of pid=28585
[2025-06-03 16:13:21] 2025-06-03 20:13:06,972 | INFO     | PID=22084 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 16:13:21] 2025-06-03 20:13:06,976 | INFO     | process IDs to be killed: [28585] (in reverse order)
[2025-06-03 16:13:21] 2025-06-03 20:13:07,037 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:13:21] 2025-06-03 20:13:07,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:13:21] 2025-06-03 20:13:07,041 | INFO     | did not find any defunct processes belonging to 28585
[2025-06-03 16:13:21] 2025-06-03 20:13:07,044 | INFO     | did not find any defunct processes belonging to 28585
[2025-06-03 16:13:21] 2025-06-03 20:13:07,044 | INFO     | ready for new job
[2025-06-03 16:13:21] 2025-06-03 20:13:07,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:13:21] 2025-06-03 20:13:07,046 | INFO     | **************************************
[2025-06-03 16:13:21] 2025-06-03 20:13:07,047 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:13:21] 2025-06-03 20:13:07,047 | INFO     | **************************************
[2025-06-03 16:13:21] 2025-06-03 20:13:07,047 | INFO     | 
[2025-06-03 16:13:21] 2025-06-03 20:13:07,047 | INFO     | architecture information:
[2025-06-03 16:13:21] 2025-06-03 20:13:07,048 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:13:21] 2025-06-03 20:13:07,067 | INFO     | cat /etc/os-release:
[2025-06-03 16:13:21] NAME="CentOS Linux"
[2025-06-03 16:13:21] VERSION="7 (Core)"
[2025-06-03 16:13:21] ID="centos"
[2025-06-03 16:13:21] ID_LIKE="rhel fedora"
[2025-06-03 16:13:21] VERSION_ID="7"
[2025-06-03 16:13:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:13:21] ANSI_COLOR="0;31"
[2025-06-03 16:13:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:13:21] HOME_URL="https://www.centos.org/"
[2025-06-03 16:13:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:13:21] 
[2025-06-03 16:13:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:13:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:13:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:13:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:13:21] 
[2025-06-03 16:13:21] 2025-06-03 20:13:07,067 | INFO     | **************************************
[2025-06-03 16:13:21] 2025-06-03 20:13:07,570 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 16:13:21] 2025-06-03 20:13:07,590 | INFO     | sufficient remaining disk space (18614321152 B)
[2025-06-03 16:13:21] 2025-06-03 20:13:07,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:13:21] 2025-06-03 20:13:07,591 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:13:21] 2025-06-03 20:13:07,591 | INFO     | update_server=False
[2025-06-03 16:13:21] 2025-06-03 20:13:07,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:13:21] 2025-06-03 20:13:07,591 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:13:21] 2025-06-03 20:13:07,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:13:21] 2025-06-03 20:13:07,592 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:13:21] 2025-06-03 20:13:07,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:13:21] 2025-06-03 20:13:07,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:13:21] 2025-06-03 20:13:08,120 | INFO     | all data control threads have been joined
[2025-06-03 16:13:21] 2025-06-03 20:13:08,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:13:21] 2025-06-03 20:13:08,465 | INFO     | aborting loop
[2025-06-03 16:13:21] 2025-06-03 20:13:08,528 | INFO     | all payload control threads have been joined
[2025-06-03 16:13:21] 2025-06-03 20:13:08,593 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:08,596 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:08,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:13:21] 2025-06-03 20:13:08,739 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:08,991 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,060 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,126 | INFO     | [data] control thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,214 | INFO     | all job control threads have been joined
[2025-06-03 16:13:21] 2025-06-03 20:13:09,440 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,470 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,533 | INFO     | [payload] control thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,564 | INFO     | [job] validate thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:09,782 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:10,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:10,145 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:10,220 | INFO     | [job] control thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:10,641 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:10,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:13:21] 2025-06-03 20:13:14,737 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:13:21] 2025-06-03 20:13:15,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929064302400)>', '<ExcThread(monitor, started 139928356779776)>']
[2025-06-03 16:13:21] 2025-06-03 20:13:16,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:13:21] 2025-06-03 20:13:16,625 | INFO     | [monitor] control thread has ended
[2025-06-03 16:13:21] 2025-06-03 20:13:20,870 | INFO     | all workflow threads have been joined
[2025-06-03 16:13:21] 2025-06-03 20:13:20,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:13:21] 2025-06-03 20:13:20,877 | INFO     | traces error code: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:20,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:13:21] 2025-06-03 20:13:21,050 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:13:21] 2025-06-03 20:13:21,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:13:21] 2025-06-03 20:13:21,059 [wrapper] pilotpid: 22084
[2025-06-03 16:13:21] 2025-06-03 20:13:21,064 [wrapper] Pilot exit status: 0
[2025-06-03 16:13:21] 2025-06-03 20:13:21,098 [wrapper] pandaids: 6677660463
[2025-06-03 16:13:21] 2025-06-03 20:13:21,146 [wrapper] cleanup supervisor_pilot 14865 22085
[2025-06-03 16:13:21] 2025-06-03 20:13:21,163 [wrapper] Test setup, not cleaning
[2025-06-03 16:13:21] 2025-06-03 20:13:21,169 [wrapper] apfmon messages muted
[2025-06-03 16:13:21] 2025-06-03 20:13:21,173 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:13:21] 2025-06-03 20:13:21,178 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:13:21]  *** Error codes and diagnostics ***
[2025-06-03 16:13:21]     "exeErrorCode": 0,
[2025-06-03 16:13:21]     "exeErrorDiag": "",
[2025-06-03 16:13:21]     "pilotErrorCode": 0,
[2025-06-03 16:13:21]     "pilotErrorDiag": "",
[2025-06-03 16:13:21]  *** Listing of results directory ***
[2025-06-03 16:13:21] total 383792
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:09 pilot3.tar.gz
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 10:30 queuedata.json
[2025-06-03 16:13:21] -rwx------ 1 boincer umatlas     37140 Jun  3 10:30 runpilot2-wrapper.sh
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas       100 Jun  3 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:13:21] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 12:47 run_atlas
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas       105 Jun  3 12:47 job.xml
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas 213425956 Jun  3 12:47 EVNT.45006593._001423.pool.root.1
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 12:47 input.tar.gz
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 12:47 start_atlas.sh
[2025-06-03 16:13:21] drwxrwx--x 2 boincer umatlas      4096 Jun  3 12:47 shared
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas         0 Jun  3 12:47 boinc_lockfile
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 12:47 pandaJob.out
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      2059 Jun  3 12:47 stderr.txt
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas    983734 Jun  3 12:47 agis_schedconf.cvmfs.json
[2025-06-03 16:13:21] drwx------ 4 boincer umatlas      4096 Jun  3 12:47 pilot3
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      5906 Jun  3 16:09 init_data.xml
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas        95 Jun  3 16:12 pilot_heartbeat.json
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas 172898534 Jun  3 16:12 HITS.45006595._035404.pool.root.1
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas       530 Jun  3 16:12 boinc_task_state.xml
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas      1061 Jun  3 16:12 memory_monitor_summary.json
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas   1603667 Jun  3 16:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas    321581 Jun  3 16:12 log.45006595._035404.job.log.tgz.1
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas      7757 Jun  3 16:13 heartbeat.json
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 16:13 boinc_mmap_file
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas        28 Jun  3 16:13 wrapper_checkpoint.txt
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas      4476 Jun  3 16:13 pilotlog.txt
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas   1112366 Jun  3 16:13 log.45006595._035404.job.log.1
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas       357 Jun  3 16:13 output.list
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas       620 Jun  3 16:13 runtime_log
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas   1454080 Jun  3 16:13 result.tar.gz
[2025-06-03 16:13:21] -rw-r--r-- 1 boincer umatlas      8660 Jun  3 16:13 runtime_log.err
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas       662 Jun  3 16:13 8VyMDmNqhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8YkKDmpnDmAn.diag
[2025-06-03 16:13:21] HITS file was successfully produced:
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas 172898534 Jun  3 16:12 shared/HITS.pool.root.1
[2025-06-03 16:13:21]  *** Contents of shared directory: ***
[2025-06-03 16:13:21] total 379212
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas 213425956 Jun  3 12:47 ATLAS.root_0
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 12:47 input.tar.gz
[2025-06-03 16:13:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 12:47 start_atlas.sh
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas 172898534 Jun  3 16:12 HITS.pool.root.1
[2025-06-03 16:13:21] -rw------- 1 boincer umatlas   1454080 Jun  3 16:13 result.tar.gz
16:13:22 (18403): run_atlas exited; CPU time 47767.233248
16:13:22 (18403): called boinc_finish(0)

</stderr_txt>
]]>

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