Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:45:58 (1971979): wrapper (7.7.26015): starting
12:45:58 (1971979): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:45:58] Arguments: --nthreads 8
[2025-06-03 12:45:58] Threads: 8
[2025-06-03 12:45:58] Checking for CVMFS
[2025-06-03 12:45:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:45:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:45:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:45:58] 2.12.6.0 956287 147099 216956 146749 3 56 18829501 32935936 3792 130560 0 382685764 99.655 358401860 26172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:45:58] CVMFS is ok
[2025-06-03 12:45:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:45:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:45:58] Further information can be found at the LHC@home message board.
[2025-06-03 12:45:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:45:58] Checking for apptainer binary...
[2025-06-03 12:45:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:45:58] Running /usr/bin/apptainer --version
[2025-06-03 12:45:58] apptainer version 1.4.1-1.el9
[2025-06-03 12:45:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:45:58] c-6-4.aglt2.org
[2025-06-03 12:45:58] apptainer works
[2025-06-03 12:45:58] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:45:58] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:45:58] Starting ATLAS job with PandaID=6677733568
[2025-06-03 12:45:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:23:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:23:22]  status=None
[2025-06-03 14:23:22]  status_code=0
[2025-06-03 14:23:22]  storage_token=
[2025-06-03 14:23:22]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677733568/log.45006595._037556.job.log.tgz.1
[2025-06-03 14:23:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/29/log.45006595._037556.job.log.tgz.1
[2025-06-03 14:23:22]  workdir=None
[2025-06-03 14:23:22] ]
[2025-06-03 14:23:22] 2025-06-03 18:22:54,856 | INFO     | transferring file log.45006595._037556.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/log.45006595._037556.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:23:22] 2025-06-03 18:22:54,856 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/log.45006595._037556.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._037556.job
[2025-06-03 14:23:22] 2025-06-03 18:22:54,882 | INFO     | adding to output.list: log.45006595._037556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/29/log.45006595._037556.job.log.tg
[2025-06-03 14:23:22] 2025-06-03 18:22:54,883 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:23:22] 2025-06-03 18:22:54,883 | INFO     | summary of transferred files:
[2025-06-03 14:23:22] 2025-06-03 18:22:54,883 | INFO     |  -- lfn=log.45006595._037556.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:23:22] 2025-06-03 18:22:54,883 | INFO     | stage-out finished correctly
[2025-06-03 14:23:22] 2025-06-03 18:22:56,158 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:23:22] 2025-06-03 18:22:56,302 | INFO     | job 6677733568 has state=finished
[2025-06-03 14:23:22] 2025-06-03 18:22:56,302 | INFO     | preparing for final server update for job 6677733568 in state='finished'
[2025-06-03 14:23:22] 2025-06-03 18:22:56,303 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:23:22] 2025-06-03 18:22:56,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:23:22] 2025-06-03 18:22:56,303 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:23:22] 2025-06-03 18:22:56,303 | INFO     | job 6677733568 has finished - writing final server update
[2025-06-03 14:23:22] 2025-06-03 18:22:56,303 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:23:22] 2025-06-03 18:22:56,318 | INFO     | executing command: lscpu
[2025-06-03 14:23:22] 2025-06-03 18:22:56,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:23:22] 2025-06-03 18:22:59,215 | WARNING  | process 1982423 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 14:23:22] 2025-06-03 18:22:59,216 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:23:22] 2025-06-03 18:22:59,216 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:23:22] 2025-06-03 18:22:59,218 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3698917 B
[2025-06-03 14:23:22] 2025-06-03 18:22:59,218 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16024 B
[2025-06-03 14:23:22] 2025-06-03 18:22:59,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 14:23:22] 2025-06-03 18:23:02,049 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 14:23:22] 2025-06-03 18:23:02,049 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,050 | INFO     | extracted standard info from prmon json
[2025-06-03 14:23:22] 2025-06-03 18:23:02,050 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:23:22] 2025-06-03 18:23:02,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:23:22] 2025-06-03 18:23:02,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:23:22] 2025-06-03 18:23:02,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:23:22] 2025-06-03 18:23:02,057 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:23:22] 2025-06-03 18:23:02,057 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 14:23:22] 2025-06-03 18:23:02,058 | INFO     | sum of deviations: 10618961648.500002
[2025-06-03 14:23:22] 2025-06-03 18:23:02,058 | INFO     | mean x: 1748972151.5
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | mean y: 2124960.465909091
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | -- intersect: -87899031990.20271
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | intersect: -87899031990.20271
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | chi2: 1.0697120396628286
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | -- intersect: -87899031990.20271
[2025-06-03 14:23:22] 2025-06-03 18:23:02,062 | INFO     | current memory leak: 50.26 B/s (using 88 data points, chi2=1.07)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,063 | INFO     | ..............................
[2025-06-03 14:23:22] 2025-06-03 18:23:02,063 | INFO     | . Timing measurements:
[2025-06-03 14:23:22] 2025-06-03 18:23:02,063 | INFO     | . get job = 0 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,063 | INFO     | . initial setup = 3 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | . payload setup = 6 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | . stage-in = 0 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | . payload execution = 5780 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | . stage-out = 0 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | . log creation = 0 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,064 | INFO     | ..............................
[2025-06-03 14:23:22] 2025-06-03 18:23:02,110 | INFO     | sufficient remaining disk space (74306289664 B)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,110 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,111 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6677733568: 4004848 B (within 2537553920 B limit)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,112 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6677733568/HITS.45006595._037556.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,112 | INFO     | total size of present files: 0 B (workdir size: 4004848 B)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,112 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6677733568/HITS.45006595._037556.pool.root.1 since it does not exist
[2025-06-03 14:23:22] 2025-06-03 18:23:02,265 | INFO     | 
[2025-06-03 14:23:22] 2025-06-03 18:23:02,266 | INFO     | job summary report
[2025-06-03 14:23:22] 2025-06-03 18:23:02,266 | INFO     | --------------------------------------------------
[2025-06-03 14:23:22] 2025-06-03 18:23:02,266 | INFO     | PanDA job id: 6677733568
[2025-06-03 14:23:22] 2025-06-03 18:23:02,266 | INFO     | task id: 45006595
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | errors: (none)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | pilot state: finished 
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | transexitcode: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | exeerrorcode: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | exeerrordiag: 
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | exitcode: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | exitmsg: OK
[2025-06-03 14:23:22] 2025-06-03 18:23:02,267 | INFO     | cpuconsumptiontime: 37699 s
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | nevents: 400
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | neventsw: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | pid: 1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | pgrp: 1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | corecount: 8
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | event service: False
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 5790: 2432074, 5792: 2441015, 5793: 2441199, 5799: 2441397}
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | --------------------------------------------------
[2025-06-03 14:23:22] 2025-06-03 18:23:02,268 | INFO     | 
[2025-06-03 14:23:22] 2025-06-03 18:23:02,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 14:23:22] 2025-06-03 18:23:02,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:23:22] 2025-06-03 18:23:02,310 | INFO     | job 6677733568 has completed (purged errors)
[2025-06-03 14:23:22] 2025-06-03 18:23:02,311 | INFO     | overall cleanup function is called
[2025-06-03 14:23:22] 2025-06-03 18:23:02,590 | INFO     | number of running child processes to parent process 1982423: 1
[2025-06-03 14:23:22] 2025-06-03 18:23:02,590 | INFO     | maximum number of monitored processes: 6
[2025-06-03 14:23:22] 2025-06-03 18:23:02,591 | INFO     | aborting job monitoring since job object (job id=6677733568) has expired
[2025-06-03 14:23:22] 2025-06-03 18:23:03,319 | INFO     | --- collectZombieJob: --- 10, [1982423]
[2025-06-03 14:23:22] 2025-06-03 18:23:03,320 | INFO     | zombie collector waiting for pid 1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:03,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:23:22] 2025-06-03 18:23:03,320 | INFO     | collected zombie processes
[2025-06-03 14:23:22] 2025-06-03 18:23:03,320 | INFO     | will attempt to kill all subprocesses of pid=1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:03,729 | INFO     | process IDs to be killed: [1982423] (in reverse order)
[2025-06-03 14:23:22] 2025-06-03 18:23:03,859 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:23:22] 2025-06-03 18:23:03,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:23:22] 2025-06-03 18:23:03,884 | INFO     | did not find any defunct processes belonging to 1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:03,908 | INFO     | did not find any defunct processes belonging to 1982423
[2025-06-03 14:23:22] 2025-06-03 18:23:03,908 | INFO     | ready for new job
[2025-06-03 14:23:22] 2025-06-03 18:23:03,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:23:22] 2025-06-03 18:23:03,914 | INFO     | **************************************
[2025-06-03 14:23:22] 2025-06-03 18:23:03,914 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:23:22] 2025-06-03 18:23:03,915 | INFO     | **************************************
[2025-06-03 14:23:22] 2025-06-03 18:23:03,915 | INFO     | 
[2025-06-03 14:23:22] 2025-06-03 18:23:03,917 | INFO     | architecture information:
[2025-06-03 14:23:22] 2025-06-03 18:23:03,920 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:23:22] 2025-06-03 18:23:03,958 | INFO     | cat /etc/os-release:
[2025-06-03 14:23:22] NAME="CentOS Linux"
[2025-06-03 14:23:22] VERSION="7 (Core)"
[2025-06-03 14:23:22] ID="centos"
[2025-06-03 14:23:22] ID_LIKE="rhel fedora"
[2025-06-03 14:23:22] VERSION_ID="7"
[2025-06-03 14:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:23:22] ANSI_COLOR="0;31"
[2025-06-03 14:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:23:22] HOME_URL="https://www.centos.org/"
[2025-06-03 14:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:23:22] 
[2025-06-03 14:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:23:22] 
[2025-06-03 14:23:22] 2025-06-03 18:23:03,959 | INFO     | **************************************
[2025-06-03 14:23:22] 2025-06-03 18:23:04,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 14:23:22] 2025-06-03 18:23:04,489 | INFO     | sufficient remaining disk space (74311532544 B)
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | INFO     | update_server=False
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:23:22] 2025-06-03 18:23:04,490 | INFO     | aborting loop
[2025-06-03 14:23:22] 2025-06-03 18:23:04,491 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:23:22] 2025-06-03 18:23:04,491 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:23:22] 2025-06-03 18:23:04,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:23:22] 2025-06-03 18:23:04,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:23:22] 2025-06-03 18:23:04,809 | INFO     | all payload control threads have been joined
[2025-06-03 14:23:22] 2025-06-03 18:23:05,112 | INFO     | all data control threads have been joined
[2025-06-03 14:23:22] 2025-06-03 18:23:05,500 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:05,501 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:05,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:23:22] 2025-06-03 18:23:05,815 | INFO     | [payload] control thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:05,882 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:05,974 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,113 | INFO     | [job] validate thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,114 | INFO     | all job control threads have been joined
[2025-06-03 14:23:22] 2025-06-03 18:23:06,118 | INFO     | [data] control thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,186 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,318 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,324 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,763 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:06,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:23:22] 2025-06-03 18:23:07,120 | INFO     | [job] control thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:07,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:23:22] 2025-06-03 18:23:07,520 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:08,279 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:10,862 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:15,269 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:23:22] 2025-06-03 18:23:16,275 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:23:22] 2025-06-03 18:23:17,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054770329408)>', '<ExcThread(monitor, started 140054412371712)>']
[2025-06-03 14:23:22] 2025-06-03 18:23:17,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:23:22] 2025-06-03 18:23:17,581 | INFO     | [monitor] control thread has ended
[2025-06-03 14:23:22] 2025-06-03 18:23:22,121 | INFO     | all workflow threads have been joined
[2025-06-03 14:23:22] 2025-06-03 18:23:22,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:23:22] 2025-06-03 18:23:22,122 | INFO     | traces error code: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:22,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:23:22] 2025-06-03 18:23:22,267 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:23:22] 2025-06-03 18:23:22,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:23:22] 2025-06-03 18:23:22,309 [wrapper] pilotpid: 1975549
[2025-06-03 14:23:22] 2025-06-03 18:23:22,312 [wrapper] Pilot exit status: 0
[2025-06-03 14:23:22] 2025-06-03 18:23:22,328 [wrapper] pandaids: 6677733568
[2025-06-03 14:23:22] 2025-06-03 18:23:22,396 [wrapper] cleanup supervisor_pilot 2458443 1975550
[2025-06-03 14:23:22] 2025-06-03 18:23:22,399 [wrapper] Test setup, not cleaning
[2025-06-03 14:23:22] 2025-06-03 18:23:22,402 [wrapper] apfmon messages muted
[2025-06-03 14:23:22] 2025-06-03 18:23:22,404 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:23:22] 2025-06-03 18:23:22,407 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:23:22]  *** Error codes and diagnostics ***
[2025-06-03 14:23:22]     "exeErrorCode": 0,
[2025-06-03 14:23:22]     "exeErrorDiag": "",
[2025-06-03 14:23:22]     "pilotErrorCode": 0,
[2025-06-03 14:23:22]     "pilotErrorDiag": "",
[2025-06-03 14:23:22]  *** Listing of results directory ***
[2025-06-03 14:23:22] total 386844
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:46 queuedata.json
[2025-06-03 14:23:22] -rwx------. 1 boincer umatlas     37140 Jun  3 11:46 runpilot2-wrapper.sh
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:23:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:45 run_atlas
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:45 job.xml
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas 212587044 Jun  3 12:45 EVNT.45006593._001507.pool.root.1
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:45 start_atlas.sh
[2025-06-03 14:23:22] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:45 shared
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 12:45 input.tar.gz
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:45 boinc_lockfile
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:45 pandaJob.out
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas    983734 Jun  3 12:46 agis_schedconf.cvmfs.json
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:23:22] drwx------. 4 boincer umatlas      4096 Jun  3 12:46 pilot3
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 14:18 init_data.xml
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas 177924207 Jun  3 14:22 HITS.45006595._037556.pool.root.1
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:22 boinc_task_state.xml
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas      1032 Jun  3 14:22 memory_monitor_summary.json
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas        95 Jun  3 14:22 pilot_heartbeat.json
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas    329899 Jun  3 14:22 log.45006595._037556.job.log.tgz.1
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas      7698 Jun  3 14:23 heartbeat.json
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:23 wrapper_checkpoint.txt
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:23 boinc_mmap_file
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas      4548 Jun  3 14:23 pilotlog.txt
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas    560276 Jun  3 14:23 log.45006595._037556.job.log.1
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas       357 Jun  3 14:23 output.list
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:23 runtime_log
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas    911360 Jun  3 14:23 result.tar.gz
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 14:23 runtime_log.err
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas       650 Jun  3 14:23 KiaKDmH1ig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmE8YKDmhFCWln.diag
[2025-06-03 14:23:22] -rw-r--r--. 1 boincer umatlas     22232 Jun  3 14:23 stderr.txt
[2025-06-03 14:23:22] HITS file was successfully produced:
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas 177924207 Jun  3 14:22 shared/HITS.pool.root.1
[2025-06-03 14:23:22]  *** Contents of shared directory: ***
[2025-06-03 14:23:22] total 382776
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas 212587044 Jun  3 12:45 ATLAS.root_0
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:45 start_atlas.sh
[2025-06-03 14:23:22] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 12:45 input.tar.gz
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas 177924207 Jun  3 14:22 HITS.pool.root.1
[2025-06-03 14:23:22] -rw-------. 1 boincer umatlas    911360 Jun  3 14:23 result.tar.gz
14:23:24 (1971979): run_atlas exited; CPU time 37834.027714
14:23:24 (1971979): called boinc_finish(0)

</stderr_txt>
]]>

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