Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:48:22 (1060908): wrapper (7.7.26015): starting
12:48:22 (1060908): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:48:22] Arguments: --nthreads 8
[2025-06-03 12:48:22] Threads: 8
[2025-06-03 12:48:22] Checking for CVMFS
[2025-06-03 12:48:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:48:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:48:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:48:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:48:22] 2.12.6.0 5676 159 78312 146749 0 186 31847892 32935936 6489 16776704 0 2392124 99.991 145371 41333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:48:22] CVMFS is ok
[2025-06-03 12:48:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:48:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:48:22] Further information can be found at the LHC@home message board.
[2025-06-03 12:48:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:48:22] Checking for apptainer binary...
[2025-06-03 12:48:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:48:22] Running /usr/bin/apptainer --version
[2025-06-03 12:48:22] apptainer version 1.4.1-1.el9
[2025-06-03 12:48:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:48:22] c7-3-28.aglt2.org
[2025-06-03 12:48:22] apptainer works
[2025-06-03 12:48:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:48:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:48:22] Starting ATLAS job with PandaID=6677550126
[2025-06-03 12:48:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:54:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:54:39]  filesize=287378
[2025-06-03 13:54:39]  filetype=log
[2025-06-03 13:54:39]  guid=517df818-6dc0-4132-bbb6-b50d2e1f3e80
[2025-06-03 13:54:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:54:39]  is_altstaged=None
[2025-06-03 13:54:39]  is_tar=False
[2025-06-03 13:54:39]  lfn=log.45006595._026774.job.log.tgz.1
[2025-06-03 13:54:39]  mtime=0
[2025-06-03 13:54:39]  protocol_id=None
[2025-06-03 13:54:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:54:39]  replicas=None
[2025-06-03 13:54:39]  scope=mc23_13p6TeV
[2025-06-03 13:54:39]  status=None
[2025-06-03 13:54:39]  status_code=0
[2025-06-03 13:54:39]  storage_token=
[2025-06-03 13:54:39]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6677550126/log.45006595._026774.job.log.tgz.1
[2025-06-03 13:54:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/77/log.45006595._026774.job.log.tgz.1
[2025-06-03 13:54:39]  workdir=None
[2025-06-03 13:54:39] ]
[2025-06-03 13:54:39] 2025-06-03 17:54:13,044 | INFO     | transferring file log.45006595._026774.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6677550126/log.45006595._026774.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 13:54:39] 2025-06-03 17:54:13,044 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6677550126/log.45006595._026774.job.log.tgz.1 /tmp/boinchome/slots/10/log.45006595._026774.j
[2025-06-03 13:54:39] 2025-06-03 17:54:13,060 | INFO     | adding to output.list: log.45006595._026774.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/77/log.45006595._026774.job.log.tg
[2025-06-03 13:54:39] 2025-06-03 17:54:13,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:54:39] 2025-06-03 17:54:13,060 | INFO     | summary of transferred files:
[2025-06-03 13:54:39] 2025-06-03 17:54:13,060 | INFO     |  -- lfn=log.45006595._026774.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:54:39] 2025-06-03 17:54:13,060 | INFO     | stage-out finished correctly
[2025-06-03 13:54:39] 2025-06-03 17:54:16,285 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:54:39] 2025-06-03 17:54:17,203 | INFO     | job 6677550126 has state=finished
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | preparing for final server update for job 6677550126 in state='finished'
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | job 6677550126 has finished - writing final server update
[2025-06-03 13:54:39] 2025-06-03 17:54:17,204 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:54:39] 2025-06-03 17:54:17,220 | INFO     | executing command: lscpu
[2025-06-03 13:54:39] 2025-06-03 17:54:17,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:54:39] 2025-06-03 17:54:18,663 | WARNING  | process 1102056 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 13:54:39] 2025-06-03 17:54:18,664 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6677550126/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:54:39] 2025-06-03 17:54:18,893 | INFO     | number of running child processes to parent process 1102056: 1
[2025-06-03 13:54:39] 2025-06-03 17:54:18,893 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:54:39] 2025-06-03 17:54:20,043 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:54:39] 2025-06-03 17:54:20,044 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6677550126/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:54:39] 2025-06-03 17:54:20,045 | INFO     | extracted standard info from prmon json
[2025-06-03 13:54:39] 2025-06-03 17:54:20,045 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:54:39] 2025-06-03 17:54:20,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:54:39] 2025-06-03 17:54:20,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:54:39] 2025-06-03 17:54:20,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:54:39] 2025-06-03 17:54:20,046 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:54:39] 2025-06-03 17:54:20,046 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | sum of deviations: 5881244240.0
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | mean x: 1748971374.5
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | mean y: 2126942.103448276
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | -- intersect: -170064317473.1612
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | intersect: -170064317473.1612
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | chi2: 0.8177704666263516
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | -- intersect: -170064317473.1612
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | current memory leak: 97.24 B/s (using 58 data points, chi2=0.82)
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | ..............................
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . Timing measurements:
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . get job = 0 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . initial setup = 2 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . payload setup = 4 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . stage-in = 0 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,047 | INFO     | . payload execution = 3921 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,048 | INFO     | . stage-out = 0 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,048 | INFO     | . log creation = 0 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,048 | INFO     | ..............................
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | 
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | job summary report
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | --------------------------------------------------
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | PanDA job id: 6677550126
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | task id: 45006595
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | errors: (none)
[2025-06-03 13:54:39] 2025-06-03 17:54:20,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | pilot state: finished 
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | transexitcode: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | exeerrorcode: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | exeerrordiag: 
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | exitcode: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | exitmsg: OK
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | cpuconsumptiontime: 26774 s
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | nevents: 400
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | neventsw: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | pid: 1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | pgrp: 1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | corecount: 8
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | event service: False
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | sizes: {0: 2405185, 3: 2405391, 11: 2405419, 3928: 2431223, 3929: 2440221, 3932: 2440221, 3936: 2440519}
[2025-06-03 13:54:39] 2025-06-03 17:54:20,573 | INFO     | --------------------------------------------------
[2025-06-03 13:54:39] 2025-06-03 17:54:20,574 | INFO     | 
[2025-06-03 13:54:39] 2025-06-03 17:54:20,574 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-06-03 13:54:39] 2025-06-03 17:54:20,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | job 6677550126 has completed (purged errors)
[2025-06-03 13:54:39] 2025-06-03 17:54:20,597 | INFO     | overall cleanup function is called
[2025-06-03 13:54:39] 2025-06-03 17:54:21,604 | INFO     | --- collectZombieJob: --- 10, [1102056]
[2025-06-03 13:54:39] 2025-06-03 17:54:21,605 | INFO     | zombie collector waiting for pid 1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:21,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:54:39] 2025-06-03 17:54:21,605 | INFO     | collected zombie processes
[2025-06-03 13:54:39] 2025-06-03 17:54:21,605 | INFO     | will attempt to kill all subprocesses of pid=1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:21,885 | INFO     | process IDs to be killed: [1102056] (in reverse order)
[2025-06-03 13:54:39] 2025-06-03 17:54:21,964 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:54:39] 2025-06-03 17:54:21,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:54:39] 2025-06-03 17:54:21,977 | INFO     | did not find any defunct processes belonging to 1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:21,986 | INFO     | did not find any defunct processes belonging to 1102056
[2025-06-03 13:54:39] 2025-06-03 17:54:21,987 | INFO     | ready for new job
[2025-06-03 13:54:39] 2025-06-03 17:54:21,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:54:39] 2025-06-03 17:54:21,988 | INFO     | **************************************
[2025-06-03 13:54:39] 2025-06-03 17:54:21,988 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:54:39] 2025-06-03 17:54:21,988 | INFO     | **************************************
[2025-06-03 13:54:39] 2025-06-03 17:54:21,988 | INFO     | 
[2025-06-03 13:54:39] 2025-06-03 17:54:22,004 | INFO     | architecture information:
[2025-06-03 13:54:39] 2025-06-03 17:54:22,004 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:54:39] 2025-06-03 17:54:22,019 | INFO     | cat /etc/os-release:
[2025-06-03 13:54:39] NAME="CentOS Linux"
[2025-06-03 13:54:39] VERSION="7 (Core)"
[2025-06-03 13:54:39] ID="centos"
[2025-06-03 13:54:39] ID_LIKE="rhel fedora"
[2025-06-03 13:54:39] VERSION_ID="7"
[2025-06-03 13:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:54:39] ANSI_COLOR="0;31"
[2025-06-03 13:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:54:39] HOME_URL="https://www.centos.org/"
[2025-06-03 13:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:54:39] 
[2025-06-03 13:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:54:39] 
[2025-06-03 13:54:39] 2025-06-03 17:54:22,020 | INFO     | **************************************
[2025-06-03 13:54:39] 2025-06-03 17:54:22,523 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-06-03 13:54:39] 2025-06-03 17:54:22,539 | INFO     | sufficient remaining disk space (70305972224 B)
[2025-06-03 13:54:39] 2025-06-03 17:54:22,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:54:39] 2025-06-03 17:54:22,540 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:54:39] 2025-06-03 17:54:22,540 | INFO     | update_server=False
[2025-06-03 13:54:39] 2025-06-03 17:54:22,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:54:39] 2025-06-03 17:54:22,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:54:39] 2025-06-03 17:54:22,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:54:39] 2025-06-03 17:54:22,541 | INFO     | aborting loop
[2025-06-03 13:54:39] 2025-06-03 17:54:22,642 | INFO     | all data control threads have been joined
[2025-06-03 13:54:39] 2025-06-03 17:54:22,949 | INFO     | all job control threads have been joined
[2025-06-03 13:54:39] 2025-06-03 17:54:23,019 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:54:39] 2025-06-03 17:54:23,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:54:39] 2025-06-03 17:54:23,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:54:39] 2025-06-03 17:54:23,545 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:23,547 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:23,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:54:39] 2025-06-03 17:54:23,645 | INFO     | [data] control thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:23,728 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:23,807 | INFO     | all payload control threads have been joined
[2025-06-03 13:54:39] 2025-06-03 17:54:23,955 | INFO     | [job] control thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,023 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,232 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,414 | INFO     | [job] validate thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,576 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,643 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,799 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:24,812 | INFO     | [payload] control thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:25,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:54:39] 2025-06-03 17:54:25,620 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:26,107 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:26,547 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:33,144 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:54:39] 2025-06-03 17:54:34,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:54:39] 2025-06-03 17:54:34,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698263590720)>', '<ExcThread(monitor, started 140697910875904)>']
[2025-06-03 13:54:39] 2025-06-03 17:54:35,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:54:39] 2025-06-03 17:54:35,079 | INFO     | [monitor] control thread has ended
[2025-06-03 13:54:39] 2025-06-03 17:54:39,757 | INFO     | all workflow threads have been joined
[2025-06-03 13:54:39] 2025-06-03 17:54:39,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:54:39] 2025-06-03 17:54:39,758 | INFO     | traces error code: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:39,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:54:39] 2025-06-03 17:54:39,840 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:54:39] 2025-06-03 17:54:39,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:54:39] 2025-06-03 17:54:39,845 [wrapper] pilotpid: 1072036
[2025-06-03 13:54:39] 2025-06-03 17:54:39,848 [wrapper] Pilot exit status: 0
[2025-06-03 13:54:39] 2025-06-03 17:54:39,856 [wrapper] pandaids: 6677550126
[2025-06-03 13:54:39] 2025-06-03 17:54:39,917 [wrapper] cleanup supervisor_pilot 1296592 1072037
[2025-06-03 13:54:39] 2025-06-03 17:54:39,920 [wrapper] Test setup, not cleaning
[2025-06-03 13:54:39] 2025-06-03 17:54:39,923 [wrapper] apfmon messages muted
[2025-06-03 13:54:39] 2025-06-03 17:54:39,925 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:54:39] 2025-06-03 17:54:39,927 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:54:39]  *** Error codes and diagnostics ***
[2025-06-03 13:54:39]     "exeErrorCode": 0,
[2025-06-03 13:54:39]     "exeErrorDiag": "",
[2025-06-03 13:54:39]     "pilotErrorCode": 0,
[2025-06-03 13:54:39]     "pilotErrorDiag": "",
[2025-06-03 13:54:39]  *** Listing of results directory ***
[2025-06-03 13:54:39] total 391924
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 05:07 pilot3.tar.gz
[2025-06-03 13:54:39] -rwx------. 1 boincer umatlas     37140 Jun  3 05:11 runpilot2-wrapper.sh
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 05:11 queuedata.json
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:54:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:48 run_atlas
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:48 job.xml
[2025-06-03 13:54:39] -rw-r--r--. 2 boincer umatlas 214459431 Jun  3 12:48 EVNT.45006593._001071.pool.root.1
[2025-06-03 13:54:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:48 start_atlas.sh
[2025-06-03 13:54:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:48 shared
[2025-06-03 13:54:39] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 12:48 input.tar.gz
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:48 boinc_lockfile
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:48 pandaJob.out
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas    983734 Jun  3 12:48 agis_schedconf.cvmfs.json
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:54:39] drwx------. 4 boincer umatlas      4096 Jun  3 12:48 pilot3
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas        95 Jun  3 13:53 pilot_heartbeat.json
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas 181674404 Jun  3 13:53 HITS.45006595._026774.pool.root.1
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:53 boinc_task_state.xml
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas      1026 Jun  3 13:54 memory_monitor_summary.json
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas    287378 Jun  3 13:54 log.45006595._026774.job.log.tgz.1
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas      6936 Jun  3 13:54 init_data.xml
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas      7680 Jun  3 13:54 heartbeat.json
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:54 boinc_mmap_file
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:54 wrapper_checkpoint.txt
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas      4426 Jun  3 13:54 pilotlog.txt
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas    393518 Jun  3 13:54 log.45006595._026774.job.log.1
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas       357 Jun  3 13:54 output.list
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:54 runtime_log
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas    696320 Jun  3 13:54 result.tar.gz
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas      8668 Jun  3 13:54 runtime_log.err
[2025-06-03 13:54:39] -rw-------. 1 boincer umatlas       650 Jun  3 13:54 RDCMDmXrcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDma5XKDmx8QVfm.diag
[2025-06-03 13:54:39] -rw-r--r--. 1 boincer umatlas     21098 Jun  3 13:54 stderr.txt
[2025-06-03 13:54:40] HITS file was successfully produced:
[2025-06-03 13:54:40] -rw-------. 1 boincer umatlas 181674404 Jun  3 13:53 shared/HITS.pool.root.1
[2025-06-03 13:54:40]  *** Contents of shared directory: ***
[2025-06-03 13:54:40] total 388056
[2025-06-03 13:54:40] -rw-r--r--. 2 boincer umatlas 214459431 Jun  3 12:48 ATLAS.root_0
[2025-06-03 13:54:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:48 start_atlas.sh
[2025-06-03 13:54:40] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 12:48 input.tar.gz
[2025-06-03 13:54:40] -rw-------. 1 boincer umatlas 181674404 Jun  3 13:53 HITS.pool.root.1
[2025-06-03 13:54:40] -rw-------. 1 boincer umatlas    696320 Jun  3 13:54 result.tar.gz
13:54:41 (1060908): run_atlas exited; CPU time 26888.934969
13:54:41 (1060908): called boinc_finish(0)

</stderr_txt>
]]>

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