Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:29 (14838): wrapper (7.7.26015): starting
02:12:29 (14838): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:12:30] Arguments: --nthreads 8
[2025-06-04 02:12:30] Threads: 8
[2025-06-04 02:12:30] Checking for CVMFS
[2025-06-04 02:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:12:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:12:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:12:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:12:31] 2.11.2.0 18352 32653 93740 146761 1 157 23841557 25165825 2934 130560 0 17429469 99.787 19708886 4352 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:12:31] CVMFS is ok
[2025-06-04 02:12:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:12:31] Checking for apptainer binary...
[2025-06-04 02:12:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:12:31] Running /usr/bin/apptainer --version
[2025-06-04 02:12:31] apptainer version 1.3.2-1.el7
[2025-06-04 02:12:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:12:33] cg-vwn313.simple-grid.lan
[2025-06-04 02:12:33] apptainer works
[2025-06-04 02:12:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:12:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:12:33] Starting ATLAS job with PandaID=6677677417
[2025-06-04 02:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:48:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:48:25] 2025-06-04 03:49:17,530 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:48:25] 2025-06-04 03:49:17,531 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,532 | INFO     | sum of deviations: 26782942887.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,532 | INFO     | mean x: 1749002474.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,533 | INFO     | mean y: 2450741.319047619
[2025-06-04 06:48:25] 2025-06-04 03:49:17,533 | INFO     | -- intersect: -16310114402.116642
[2025-06-04 06:48:25] 2025-06-04 03:49:17,533 | INFO     | intersect: -16310114402.116642
[2025-06-04 06:48:25] 2025-06-04 03:49:17,533 | INFO     | chi2: 2.6057124326190513
[2025-06-04 06:48:25] 2025-06-04 03:49:17,533 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,552 | INFO     | sum of deviations: 39636944658.00001
[2025-06-04 06:48:25] 2025-06-04 03:49:17,553 | INFO     | mean x: 1749002322.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,553 | INFO     | mean y: 2460326.1219512196
[2025-06-04 06:48:25] 2025-06-04 03:49:17,553 | INFO     | -- intersect: -25948945161.369884
[2025-06-04 06:48:25] 2025-06-04 03:49:17,553 | INFO     | intersect: -25948945161.369884
[2025-06-04 06:48:25] 2025-06-04 03:49:17,553 | INFO     | chi2: 1.840843098174576
[2025-06-04 06:48:25] 2025-06-04 03:49:17,554 | INFO     | current chi2=1.840843098174576 (change=29.353558929589575 %)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,554 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,555 | INFO     | sum of deviations: 38440437100.000015
[2025-06-04 06:48:25] 2025-06-04 03:49:17,555 | INFO     | mean x: 1749002169.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | mean y: 2459369.3
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | -- intersect: -27100774467.026283
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | intersect: -27100774467.026283
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | chi2: 1.8420966181794614
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | current chi2=1.8420966181794614 (change=-0.06809488576882748 %)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,556 | INFO     | right removable region: 199
[2025-06-04 06:48:25] 2025-06-04 03:49:17,557 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,558 | INFO     | sum of deviations: -12229007452.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,558 | INFO     | mean x: 1749002627.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,558 | INFO     | mean y: 2480197.980487805
[2025-06-04 06:48:25] 2025-06-04 03:49:17,559 | INFO     | -- intersect: 8009151478.462528
[2025-06-04 06:48:25] 2025-06-04 03:49:17,559 | INFO     | intersect: 8009151478.462528
[2025-06-04 06:48:25] 2025-06-04 03:49:17,559 | INFO     | chi2: 0.8271169259935724
[2025-06-04 06:48:25] 2025-06-04 03:49:17,559 | INFO     | current chi2=0.8271169259935724 (change=68.25755153794077 %)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,559 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,561 | INFO     | sum of deviations: -10973071650.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,561 | INFO     | mean x: 1749002779.5
[2025-06-04 06:48:25] 2025-06-04 03:49:17,561 | INFO     | mean y: 2479147.665
[2025-06-04 06:48:25] 2025-06-04 03:49:17,561 | INFO     | -- intersect: 7739275422.870382
[2025-06-04 06:48:25] 2025-06-04 03:49:17,561 | INFO     | intersect: 7739275422.870382
[2025-06-04 06:48:25] 2025-06-04 03:49:17,562 | INFO     | chi2: 0.8096880893866012
[2025-06-04 06:48:25] 2025-06-04 03:49:17,562 | INFO     | current chi2=0.8096880893866012 (change=2.1071792946365955 %)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,562 | INFO     | left removable region: 20
[2025-06-04 06:48:25] 2025-06-04 03:49:17,562 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | sum of deviations: 2710959316.0000005
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | mean x: 1749002749.0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | mean y: 2488950.7318435754
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | -- intersect: -2663691439.0480256
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | intersect: -2663691439.0480256
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | chi2: 0.00016388813720913641
[2025-06-04 06:48:25] 2025-06-04 03:49:17,564 | INFO     | -- intersect: -2663691439.0480256
[2025-06-04 06:48:25] 2025-06-04 03:49:17,565 | INFO     | current memory leak: 1.52 B/s (using 179 data points, chi2=0.00)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,565 | INFO     | ..............................
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . Timing measurements:
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . get job = 0 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . initial setup = 2 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . payload setup = 24 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . stage-in = 0 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . payload execution = 12822 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . stage-out = 3 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | . log creation = 1 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,566 | INFO     | ..............................
[2025-06-04 06:48:25] 2025-06-04 03:49:17,639 | INFO     | PID=20855 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,639 | INFO     | .. there are 9 such processes running
[2025-06-04 06:48:25] 2025-06-04 03:49:17,735 | INFO     | 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,736 | INFO     | job summary report
[2025-06-04 06:48:25] 2025-06-04 03:49:17,736 | INFO     | --------------------------------------------------
[2025-06-04 06:48:25] 2025-06-04 03:49:17,736 | INFO     | PanDA job id: 6677677417
[2025-06-04 06:48:25] 2025-06-04 03:49:17,736 | INFO     | task id: 45006595
[2025-06-04 06:48:25] 2025-06-04 03:49:17,736 | INFO     | errors: (none)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | pilot state: finished 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | transexitcode: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | exeerrorcode: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | exeerrordiag: 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | exitcode: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | exitmsg: OK
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | cpuconsumptiontime: 48137 s
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | nevents: 400
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | neventsw: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | pid: 6081
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | pgrp: 6081
[2025-06-04 06:48:25] 2025-06-04 03:49:17,737 | INFO     | corecount: 8
[2025-06-04 06:48:25] 2025-06-04 03:49:17,738 | INFO     | event service: False
[2025-06-04 06:48:25] 2025-06-04 03:49:17,738 | INFO     | sizes: {0: 2404958, 1: 2405213, 12: 2405213, 13: 2405447, 23: 2405503, 12851: 2434878, 12854: 2443849, 12857: 2443905, 12940: 2444075}
[2025-06-04 06:48:25] 2025-06-04 03:49:17,738 | INFO     | --------------------------------------------------
[2025-06-04 06:48:25] 2025-06-04 03:49:17,738 | INFO     | 
[2025-06-04 06:48:25] 2025-06-04 03:49:17,738 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:48:25] 2025-06-04 03:49:17,847 | INFO     | job 6677677417 has completed (purged errors)
[2025-06-04 06:48:25] 2025-06-04 03:49:17,847 | INFO     | overall cleanup function is called
[2025-06-04 06:48:25] 2025-06-04 03:49:18,857 | INFO     | --- collectZombieJob: --- 10, [6081]
[2025-06-04 06:48:25] 2025-06-04 03:49:18,858 | INFO     | zombie collector waiting for pid 6081
[2025-06-04 06:48:25] 2025-06-04 03:49:18,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:48:25] 2025-06-04 03:49:18,858 | INFO     | collected zombie processes
[2025-06-04 06:48:25] 2025-06-04 03:49:18,858 | INFO     | will attempt to kill all subprocesses of pid=6081
[2025-06-04 06:48:25] 2025-06-04 03:49:18,987 | INFO     | process IDs to be killed: [6081] (in reverse order)
[2025-06-04 06:48:25] 2025-06-04 03:49:19,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:48:25] 2025-06-04 03:49:19,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:48:25] 2025-06-04 03:49:19,327 | INFO     | did not find any defunct processes belonging to 6081
[2025-06-04 06:48:25] 2025-06-04 03:49:19,331 | INFO     | did not find any defunct processes belonging to 6081
[2025-06-04 06:48:25] 2025-06-04 03:49:19,331 | INFO     | ready for new job
[2025-06-04 06:48:25] 2025-06-04 03:49:19,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:48:25] 2025-06-04 03:49:19,342 | INFO     | **************************************
[2025-06-04 06:48:25] 2025-06-04 03:49:19,342 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:48:25] 2025-06-04 03:49:19,342 | INFO     | **************************************
[2025-06-04 06:48:25] 2025-06-04 03:49:19,342 | INFO     | 
[2025-06-04 06:48:25] 2025-06-04 03:49:19,343 | INFO     | pilot is running in a VM
[2025-06-04 06:48:25] 2025-06-04 03:49:19,343 | INFO     | architecture information:
[2025-06-04 06:48:25] 2025-06-04 03:49:19,358 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:48:25] 2025-06-04 03:49:19,710 | INFO     | cat /etc/os-release:
[2025-06-04 06:48:25] NAME="CentOS Linux"
[2025-06-04 06:48:25] VERSION="7 (Core)"
[2025-06-04 06:48:25] ID="centos"
[2025-06-04 06:48:25] ID_LIKE="rhel fedora"
[2025-06-04 06:48:25] VERSION_ID="7"
[2025-06-04 06:48:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:48:25] ANSI_COLOR="0;31"
[2025-06-04 06:48:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:48:25] HOME_URL="https://www.centos.org/"
[2025-06-04 06:48:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:48:25] 
[2025-06-04 06:48:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:48:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:48:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:48:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:48:25] 
[2025-06-04 06:48:25] 2025-06-04 03:49:19,710 | INFO     | **************************************
[2025-06-04 06:48:25] 2025-06-04 03:49:20,213 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 06:48:25] 2025-06-04 03:49:20,364 | INFO     | sufficient remaining disk space (497042849792 B)
[2025-06-04 06:48:25] 2025-06-04 03:49:20,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:48:25] 2025-06-04 03:49:20,365 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:48:25] 2025-06-04 03:49:20,365 | INFO     | update_server=False
[2025-06-04 06:48:25] 2025-06-04 03:49:20,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:48:25] 2025-06-04 03:49:20,369 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:48:25] 2025-06-04 03:49:20,370 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:48:25] 2025-06-04 03:49:20,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:48:25] 2025-06-04 03:49:20,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:48:25] 2025-06-04 03:49:20,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:48:25] 2025-06-04 03:49:20,721 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:48:25] 2025-06-04 03:49:20,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:48:25] 2025-06-04 03:49:20,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:25] 2025-06-04 03:49:20,722 | INFO     | will abort loop
[2025-06-04 06:48:25] 2025-06-04 03:49:21,168 | INFO     | all job control threads have been joined
[2025-06-04 06:48:25] 2025-06-04 03:49:21,250 | INFO     | all payload control threads have been joined
[2025-06-04 06:48:25] 2025-06-04 03:49:21,268 | INFO     | all data control threads have been joined
[2025-06-04 06:48:25] 2025-06-04 03:49:21,372 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:21,411 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:21,459 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:21,562 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:21,727 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,174 | INFO     | [job] control thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,188 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:48:25] 2025-06-04 03:49:22,256 | INFO     | [payload] control thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,274 | INFO     | [data] control thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,377 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,476 | INFO     | [job] validate thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,491 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:22,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:25] 2025-06-04 03:49:22,804 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:23,756 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:26,241 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:31,054 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:48:25] 2025-06-04 03:49:32,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:48:25] 2025-06-04 03:49:33,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796544681792)>', '<ExcThread(monitor, started 139796244571904)>']
[2025-06-04 06:48:25] 2025-06-04 03:49:33,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:48:25] 2025-06-04 03:49:33,447 | INFO     | [monitor] control thread has ended
[2025-06-04 06:48:25] 2025-06-04 03:49:38,240 | INFO     | all workflow threads have been joined
[2025-06-04 06:48:25] 2025-06-04 03:49:38,241 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:48:25] 2025-06-04 03:49:38,241 | INFO     | traces error code: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:38,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:48:25] 2025-06-04 03:49:38,665 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:48:25] 2025-06-04 03:49:38,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:48:25] 2025-06-04 03:49:38,841 [wrapper] pilotpid: 20855
[2025-06-04 06:48:25] 2025-06-04 03:49:38,930 [wrapper] Pilot exit status: 0
[2025-06-04 06:48:25] 2025-06-04 03:49:39,429 [wrapper] pandaids: 6677677417
[2025-06-04 06:48:25] 2025-06-04 03:49:39,975 [wrapper] cleanup supervisor_pilot 31119 20856
[2025-06-04 06:48:25] 2025-06-04 03:49:40,017 [wrapper] Test setup, not cleaning
[2025-06-04 06:48:25] 2025-06-04 03:49:40,063 [wrapper] apfmon messages muted
[2025-06-04 06:48:25] 2025-06-04 03:49:40,106 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:48:25] 2025-06-04 03:49:40,142 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:48:25]  *** Error codes and diagnostics ***
[2025-06-04 06:48:25]     "exeErrorCode": 0,
[2025-06-04 06:48:25]     "exeErrorDiag": "",
[2025-06-04 06:48:25]     "pilotErrorCode": 0,
[2025-06-04 06:48:25]     "pilotErrorDiag": "",
[2025-06-04 06:48:25]  *** Listing of results directory ***
[2025-06-04 06:48:25] total 381388
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:41 queuedata.json
[2025-06-04 06:48:25] -rwx------. 1 boinc boinc     37140 Jun  3 17:41 runpilot2-wrapper.sh
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:48:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:12 run_atlas
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:12 job.xml
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc      6392 Jun  4 02:12 init_data.xml
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc 213856888 Jun  4 02:12 EVNT.45006593._001495.pool.root.1
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:12 start_atlas.sh
[2025-06-04 06:48:25] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:12 shared
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc    508879 Jun  4 02:12 input.tar.gz
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:12 boinc_lockfile
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:12 pandaJob.out
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc    986077 Jun  4 02:13 agis_schedconf.cvmfs.json
[2025-06-04 06:48:25] drwx------. 4 boinc boinc      4096 Jun  4 02:13 pilot3
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc 169825048 Jun  4 05:46 HITS.45006595._037227.pool.root.1
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:46 boinc_task_state.xml
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc      1017 Jun  4 05:47 memory_monitor_summary.json
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc   1603667 Jun  4 05:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc    389952 Jun  4 05:47 log.45006595._037227.job.log.tgz.1
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc        95 Jun  4 05:49 pilot_heartbeat.json
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc      7690 Jun  4 05:49 heartbeat.json
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc      4798 Jun  4 05:49 pilotlog.txt
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc   1129884 Jun  4 05:49 log.45006595._037227.job.log.1
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc       357 Jun  4 05:49 output.list
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:49 runtime_log
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc   1536000 Jun  4 05:49 result.tar.gz
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc       656 Jun  4 05:49 TUMMDmWwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0rkKDmxruhmm.diag
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc      8673 Jun  4 05:49 runtime_log.err
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:47 wrapper_checkpoint.txt
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:48 boinc_mmap_file
[2025-06-04 06:48:25] -rw-r--r--. 1 boinc boinc     20609 Jun  4 06:48 stderr.txt
[2025-06-04 06:48:25] HITS file was successfully produced:
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc 169825048 Jun  4 05:46 shared/HITS.pool.root.1
[2025-06-04 06:48:25]  *** Contents of shared directory: ***
[2025-06-04 06:48:25] total 376712
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc 213856888 Jun  4 02:12 ATLAS.root_0
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:12 start_atlas.sh
[2025-06-04 06:48:25] -rw-r--r--. 2 boinc boinc    508879 Jun  4 02:12 input.tar.gz
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc 169825048 Jun  4 05:46 HITS.pool.root.1
[2025-06-04 06:48:25] -rw-------. 1 boinc boinc   1536000 Jun  4 05:49 result.tar.gz
06:48:27 (14838): run_atlas exited; CPU time 48310.508911
06:48:27 (14838): called boinc_finish(0)

</stderr_txt>
]]>

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