Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:01 (1398391): wrapper (7.7.26015): starting
04:45:01 (1398391): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 04:45:01] Arguments: --nthreads 4
[2025-06-05 04:45:01] Threads: 4
[2025-06-05 04:45:01] Checking for CVMFS
[2025-06-05 04:45:01] No cvmfs_config command found, will try listing directly
[2025-06-05 04:45:01] CVMFS is ok
[2025-06-05 04:45:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:45:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:45:01] Further information can be found at the LHC@home message board.
[2025-06-05 04:45:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:45:01] Checking for apptainer binary...
[2025-06-05 04:45:01] which: no apptainer in ((null))
[2025-06-05 04:45:01] apptainer is not installed, using version from CVMFS
[2025-06-05 04:45:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:45:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-05 04:45:01] apptainer works
[2025-06-05 04:45:01] Set ATHENA_PROC_NUMBER=4
[2025-06-05 04:45:01] Set ATHENA_CORE_NUMBER=4
[2025-06-05 04:45:01] Starting ATLAS job with PandaID=6677677398
[2025-06-05 04:45:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:09:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:09:12] 2025-06-05 05:06:40,646 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:09:12] 2025-06-05 05:06:41,416 | WARNING  | process 1412735 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 07:09:12] 2025-06-05 05:06:41,417 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6677677398/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:09:12] 2025-06-05 05:06:42,142 | INFO     | number of running child processes to parent process 1412735: 1
[2025-06-05 07:09:12] 2025-06-05 05:06:42,142 | INFO     | maximum number of monitored processes: 6
[2025-06-05 07:09:12] 2025-06-05 05:06:44,659 | INFO     | monitor loop #587: job 0:6677677398 is in state 'finished'
[2025-06-05 07:09:12] 2025-06-05 05:06:44,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,766 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:09:12] 2025-06-05 05:06:46,767 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6677677398/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,768 | INFO     | extracted standard info from prmon json
[2025-06-05 07:09:12] 2025-06-05 05:06:46,769 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:09:12] 2025-06-05 05:06:46,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:09:12] 2025-06-05 05:06:46,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:09:12] 2025-06-05 05:06:46,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:09:12] 2025-06-05 05:06:46,772 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:09:12] 2025-06-05 05:06:46,772 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,773 | INFO     | sum of deviations: 14460413682.000004
[2025-06-05 07:09:12] 2025-06-05 05:06:46,773 | INFO     | mean x: 1749095756.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,773 | INFO     | mean y: 2304068.143884892
[2025-06-05 07:09:12] 2025-06-05 05:06:46,773 | INFO     | -- intersect: -30371134223.220993
[2025-06-05 07:09:12] 2025-06-05 05:06:46,773 | INFO     | intersect: -30371134223.220993
[2025-06-05 07:09:12] 2025-06-05 05:06:46,774 | INFO     | chi2: 1.5835417167426473
[2025-06-05 07:09:12] 2025-06-05 05:06:46,774 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | sum of deviations: 13883592436.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | mean x: 1749095603.5
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | mean y: 2303057.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | -- intersect: -32547380626.86468
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | intersect: -32547380626.86468
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | chi2: 1.585755021697841
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | current chi2=1.585755021697841 (change=-0.1397692862646248 %)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | right removable region: 133
[2025-06-05 07:09:12] 2025-06-05 05:06:46,775 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 07:09:12] 2025-06-05 05:06:46,776 | INFO     | sum of deviations: -6162606526.499999
[2025-06-05 07:09:12] 2025-06-05 05:06:46,776 | INFO     | mean x: 1749095908.5
[2025-06-05 07:09:12] 2025-06-05 05:06:46,776 | INFO     | mean y: 2339772.962686567
[2025-06-05 07:09:12] 2025-06-05 05:06:46,776 | INFO     | -- intersect: 14450396283.449749
[2025-06-05 07:09:12] 2025-06-05 05:06:46,777 | INFO     | intersect: 14450396283.449749
[2025-06-05 07:09:12] 2025-06-05 05:06:46,777 | INFO     | chi2: 0.016536568798415346
[2025-06-05 07:09:12] 2025-06-05 05:06:46,777 | INFO     | current chi2=0.016536568798415346 (change=98.9557225664739 %)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,777 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | sum of deviations: -5265646270.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | mean x: 1749096061.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | mean y: 2338034.2403100776
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | -- intersect: 13839400027.84407
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | intersect: 13839400027.84407
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | chi2: 0.01306084650110588
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | current chi2=0.01306084650110588 (change=21.01840073161087 %)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,778 | INFO     | left removable region: 20
[2025-06-05 07:09:12] 2025-06-05 05:06:46,779 | INFO     | sum of square deviations: 447383272.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,779 | INFO     | sum of deviations: -2722328801.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,779 | INFO     | mean x: 1749096183.0
[2025-06-05 07:09:12] 2025-06-05 05:06:46,779 | INFO     | mean y: 2332875.4159292034
[2025-06-05 07:09:12] 2025-06-05 05:06:46,779 | INFO     | -- intersect: 10645589368.698645
[2025-06-05 07:09:12] 2025-06-05 05:06:46,780 | INFO     | intersect: 10645589368.698645
[2025-06-05 07:09:12] 2025-06-05 05:06:46,780 | INFO     | chi2: 0.00937839215001252
[2025-06-05 07:09:12] 2025-06-05 05:06:46,780 | INFO     | -- intersect: 10645589368.698645
[2025-06-05 07:09:12] 2025-06-05 05:06:46,780 | INFO     | current memory leak: -6.09 B/s (using 113 data points, chi2=0.01)
[2025-06-05 07:09:12] 2025-06-05 05:06:46,780 | INFO     | ..............................
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . Timing measurements:
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . get job = 0 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . initial setup = 1 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . payload setup = 8 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . stage-in = 0 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . payload execution = 8452 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . stage-out = 0 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | . log creation = 0 s
[2025-06-05 07:09:12] 2025-06-05 05:06:46,781 | INFO     | ..............................
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | 
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | job summary report
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | --------------------------------------------------
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | PanDA job id: 6677677398
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | task id: 45006595
[2025-06-05 07:09:12] 2025-06-05 05:06:47,126 | INFO     | errors: (none)
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | pilot state: finished 
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | transexitcode: 0
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | exeerrorcode: 0
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | exeerrordiag: 
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | exitcode: 0
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | exitmsg: OK
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | cpuconsumptiontime: 31824 s
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | nevents: 400
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | neventsw: 0
[2025-06-05 07:09:12] 2025-06-05 05:06:47,127 | INFO     | pid: 1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | pgrp: 1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | corecount: 4
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | event service: False
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | sizes: {0: 2397354, 6: 2397560, 11: 2397588, 8464: 2425916, 8465: 2425915, 8466: 2434936, 8469: 2435120, 8475: 2435290}
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | --------------------------------------------------
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | 
[2025-06-05 07:09:12] 2025-06-05 05:06:47,128 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-05 07:09:12] 2025-06-05 05:06:47,158 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:09:12] 2025-06-05 05:06:47,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:09:12] 2025-06-05 05:06:47,160 | INFO     | job 6677677398 has completed (purged errors)
[2025-06-05 07:09:12] 2025-06-05 05:06:47,160 | INFO     | overall cleanup function is called
[2025-06-05 07:09:12] 2025-06-05 05:06:48,168 | INFO     | --- collectZombieJob: --- 10, [1412735]
[2025-06-05 07:09:12] 2025-06-05 05:06:48,169 | INFO     | zombie collector waiting for pid 1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:48,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:09:12] 2025-06-05 05:06:48,169 | INFO     | collected zombie processes
[2025-06-05 07:09:12] 2025-06-05 05:06:48,169 | INFO     | will attempt to kill all subprocesses of pid=1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:48,878 | INFO     | process IDs to be killed: [1412735] (in reverse order)
[2025-06-05 07:09:12] 2025-06-05 05:06:49,132 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:09:12] 2025-06-05 05:06:49,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:09:12] 2025-06-05 05:06:49,165 | INFO     | did not find any defunct processes belonging to 1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:49,195 | INFO     | did not find any defunct processes belonging to 1412735
[2025-06-05 07:09:12] 2025-06-05 05:06:49,195 | INFO     | ready for new job
[2025-06-05 07:09:12] 2025-06-05 05:06:49,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:09:12] 2025-06-05 05:06:49,197 | INFO     | **************************************
[2025-06-05 07:09:12] 2025-06-05 05:06:49,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:09:12] 2025-06-05 05:06:49,198 | INFO     | **************************************
[2025-06-05 07:09:12] 2025-06-05 05:06:49,198 | INFO     | 
[2025-06-05 07:09:12] 2025-06-05 05:06:49,206 | INFO     | architecture information:
[2025-06-05 07:09:12] 2025-06-05 05:06:49,207 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:09:12] 2025-06-05 05:06:49,232 | INFO     | cat /etc/os-release:
[2025-06-05 07:09:12] NAME="CentOS Linux"
[2025-06-05 07:09:12] VERSION="7 (Core)"
[2025-06-05 07:09:12] ID="centos"
[2025-06-05 07:09:12] ID_LIKE="rhel fedora"
[2025-06-05 07:09:12] VERSION_ID="7"
[2025-06-05 07:09:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:09:12] ANSI_COLOR="0;31"
[2025-06-05 07:09:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:09:12] HOME_URL="https://www.centos.org/"
[2025-06-05 07:09:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:09:12] 
[2025-06-05 07:09:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:09:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:09:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:09:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:09:12] 
[2025-06-05 07:09:12] 2025-06-05 05:06:49,233 | INFO     | **************************************
[2025-06-05 07:09:12] 2025-06-05 05:06:49,736 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-05 07:09:12] 2025-06-05 05:06:49,759 | INFO     | sufficient remaining disk space (3277977550848 B)
[2025-06-05 07:09:12] 2025-06-05 05:06:49,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:09:12] 2025-06-05 05:06:49,759 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:09:12] 2025-06-05 05:06:49,760 | INFO     | update_server=False
[2025-06-05 07:09:12] 2025-06-05 05:06:49,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:09:12] 2025-06-05 05:06:50,614 | INFO     | all data control threads have been joined
[2025-06-05 07:09:12] 2025-06-05 05:06:50,655 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:09:12] 2025-06-05 05:06:50,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:09:12] 2025-06-05 05:06:50,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:09:12] 2025-06-05 05:06:50,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:09:12] 2025-06-05 05:06:50,675 | INFO     | aborting loop
[2025-06-05 07:09:12] 2025-06-05 05:06:50,765 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:50,804 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:50,871 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:50,893 | INFO     | all job control threads have been joined
[2025-06-05 07:09:12] 2025-06-05 05:06:50,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:09:12] 2025-06-05 05:06:50,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:09:12] 2025-06-05 05:06:51,004 | INFO     | all payload control threads have been joined
[2025-06-05 07:09:12] 2025-06-05 05:06:51,179 | INFO     | [job] validate thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,619 | INFO     | [data] control thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,680 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,804 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,807 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,844 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,853 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:51,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:09:12] 2025-06-05 05:06:51,898 | INFO     | [job] control thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:52,009 | INFO     | [payload] control thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:52,889 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:52,956 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:54,993 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:06:59,817 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:09:12] 2025-06-05 05:07:00,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:09:12] 2025-06-05 05:07:02,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22606266517312)>', '<ExcThread(monitor, started 22605549524736)>']
[2025-06-05 07:09:12] 2025-06-05 05:07:03,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:09:12] 2025-06-05 05:07:03,718 | INFO     | [monitor] control thread has ended
[2025-06-05 07:09:12] 2025-06-05 05:07:07,808 | INFO     | all workflow threads have been joined
[2025-06-05 07:09:12] 2025-06-05 05:07:07,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:09:12] 2025-06-05 05:07:07,810 | INFO     | traces error code: 0
[2025-06-05 07:09:12] 2025-06-05 05:07:07,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:09:12] 2025-06-05 05:07:07,966 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:09:12] 2025-06-05 05:07:07,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:09:12] 2025-06-05 05:07:07,974 [wrapper] pilotpid: 1405351
[2025-06-05 07:09:12] 2025-06-05 05:07:07,978 [wrapper] Pilot exit status: 0
[2025-06-05 07:09:12] 2025-06-05 05:07:07,993 [wrapper] pandaids: 6677677398
[2025-06-05 07:09:12] 2025-06-05 05:07:08,145 [wrapper] cleanup supervisor_pilot 1885092 1405352
[2025-06-05 07:09:12] 2025-06-05 05:07:08,149 [wrapper] Test setup, not cleaning
[2025-06-05 07:09:12] 2025-06-05 05:07:08,153 [wrapper] apfmon messages muted
[2025-06-05 07:09:12] 2025-06-05 05:07:08,157 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:09:12] 2025-06-05 05:07:08,160 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:09:12]  *** Error codes and diagnostics ***
[2025-06-05 07:09:12]     "exeErrorCode": 0,
[2025-06-05 07:09:12]     "exeErrorDiag": "",
[2025-06-05 07:09:12]     "pilotErrorCode": 0,
[2025-06-05 07:09:12]     "pilotErrorDiag": "",
[2025-06-05 07:09:12]  *** Listing of results directory ***
[2025-06-05 07:09:12] total 393576
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-05 07:09:12] -rwx------ 1 boinc boinc     37140 Jun  3 17:41 runpilot2-wrapper.sh
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:41 queuedata.json
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:09:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:44 run_atlas
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:44 job.xml
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc      6687 Jun  5 04:45 init_data.xml
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc 213856888 Jun  5 04:45 EVNT.45006593._001495.pool.root.1
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:45 start_atlas.sh
[2025-06-05 07:09:12] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:45 shared
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc    508874 Jun  5 04:45 input.tar.gz
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:45 boinc_lockfile
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc      2525 Jun  5 04:45 pandaJob.out
[2025-06-05 07:09:12] -rw------- 1 boinc boinc    987109 Jun  5 04:45 agis_schedconf.cvmfs.json
[2025-06-05 07:09:12] -rw------- 1 boinc boinc   1598969 Jun  5 04:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:09:12] drwx------ 4 boinc boinc      4096 Jun  5 04:45 pilot3
[2025-06-05 07:09:12] -rw------- 1 boinc boinc 183189917 Jun  5 07:06 HITS.45006595._037208.pool.root.1
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc       529 Jun  5 07:06 boinc_task_state.xml
[2025-06-05 07:09:12] -rw------- 1 boinc boinc      1029 Jun  5 07:06 memory_monitor_summary.json
[2025-06-05 07:09:12] -rw------- 1 boinc boinc    271273 Jun  5 07:06 log.45006595._037208.job.log.tgz.1
[2025-06-05 07:09:12] -rw------- 1 boinc boinc      7701 Jun  5 07:06 heartbeat.json
[2025-06-05 07:09:12] -rw------- 1 boinc boinc        95 Jun  5 07:06 pilot_heartbeat.json
[2025-06-05 07:09:12] -rw------- 1 boinc boinc      4437 Jun  5 07:07 pilotlog.txt
[2025-06-05 07:09:12] -rw------- 1 boinc boinc    799631 Jun  5 07:07 log.45006595._037208.job.log.1
[2025-06-05 07:09:12] -rw------- 1 boinc boinc       357 Jun  5 07:07 output.list
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:07 runtime_log
[2025-06-05 07:09:12] -rw------- 1 boinc boinc   1085440 Jun  5 07:07 result.tar.gz
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc      9040 Jun  5 07:07 runtime_log.err
[2025-06-05 07:09:12] -rw------- 1 boinc boinc       662 Jun  5 07:07 Z6oLDmNwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhrkKDm21sumn.diag
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc        27 Jun  5 07:08 wrapper_checkpoint.txt
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:09 boinc_mmap_file
[2025-06-05 07:09:12] -rw-r--r-- 1 boinc boinc     20959 Jun  5 07:09 stderr.txt
[2025-06-05 07:09:12] HITS file was successfully produced:
[2025-06-05 07:09:12] -rw------- 1 boinc boinc 183189917 Jun  5 07:06 shared/HITS.pool.root.1
[2025-06-05 07:09:12]  *** Contents of shared directory: ***
[2025-06-05 07:09:12] total 389332
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc 213856888 Jun  5 04:45 ATLAS.root_0
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:45 start_atlas.sh
[2025-06-05 07:09:12] -rw-r--r-- 2 boinc boinc    508874 Jun  5 04:45 input.tar.gz
[2025-06-05 07:09:12] -rw------- 1 boinc boinc 183189917 Jun  5 07:06 HITS.pool.root.1
[2025-06-05 07:09:12] -rw------- 1 boinc boinc   1085440 Jun  5 07:07 result.tar.gz
07:09:13 (1398391): run_atlas exited; CPU time 32318.948483
07:09:13 (1398391): called boinc_finish(0)

</stderr_txt>
]]>

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