Name GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn_1
Workunit 232821153
Created 3 Jun 2025, 15:39:31 UTC
Sent 3 Jun 2025, 16:42:55 UTC
Report deadline 11 Jun 2025, 16:42:55 UTC
Received 6 Jun 2025, 7:36:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10875047
Run time 5 hours 33 min 40 sec
CPU time 1 days 11 hours 2 min 19 sec
Validate state Valid
Credit 311.67
Device peak FLOPS 12.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.67 GB
Peak swap size 31.77 GB
Peak disk usage 968.98 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:43:29 (424718): wrapper (7.7.26015): starting
12:43:29 (424718): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:43:29] Arguments: --nthreads 8
[2025-06-03 12:43:29] Threads: 8
[2025-06-03 12:43:29] Checking for CVMFS
[2025-06-03 12:43:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:43:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:43:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:43:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:43:30] 2.12.6.0 2097083 99818 848928 146749 0 194 19899077 21042177 3039 130560 3 167490265 99.315 304980111 23293 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:43:30] CVMFS is ok
[2025-06-03 12:43:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:43:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:43:30] Further information can be found at the LHC@home message board.
[2025-06-03 12:43:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:43:30] Checking for apptainer binary...
[2025-06-03 12:43:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:43:30] Running /usr/bin/apptainer --version
[2025-06-03 12:43:30] apptainer version 1.4.1-1.el9
[2025-06-03 12:43:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:43:30] c-16-16.aglt2.org
[2025-06-03 12:43:30] apptainer works
[2025-06-03 12:43:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:43:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:43:30] Starting ATLAS job with PandaID=6677658130
[2025-06-03 12:43:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:49:43 (543392): wrapper (7.7.26015): starting
23:49:43 (543392): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 23:49:43] Arguments: --nthreads 10
[2025-06-05 23:49:43] Threads: 10
[2025-06-05 23:49:43] This job has been restarted, cleaning up previous attempt
[2025-06-05 23:49:43] Checking for CVMFS
[2025-06-05 23:49:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:49:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:49:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:49:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:49:44] 2.12.6.0 3989 314 98632 146842 1 263 14848225 21042177 7532 16776704 0 428976 95.541 3431720 45596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 23:49:44] CVMFS is ok
[2025-06-05 23:49:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:49:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 23:49:44] Further information can be found at the LHC@home message board.
[2025-06-05 23:49:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:49:44] Checking for apptainer binary...
[2025-06-05 23:49:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 23:49:44] Running /usr/bin/apptainer --version
[2025-06-05 23:49:44] apptainer version 1.4.1-1.el9
[2025-06-05 23:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:49:44] c-16-16.aglt2.org
[2025-06-05 23:49:44] apptainer works
[2025-06-05 23:49:44] Set ATHENA_PROC_NUMBER=10
[2025-06-05 23:49:44] Set ATHENA_CORE_NUMBER=10
[2025-06-05 23:49:44] Starting ATLAS job with PandaID=6677658130
[2025-06-05 23:49:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:52:51] Job failed
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/4/
[2025-06-05 23:52:51] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/4/
[2025-06-05 23:52:51] + mv ATLAS.root_0 EVNT.45006593._001404.pool.root.1
[2025-06-05 23:52:51] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.45006593._001404.pool.root.1&#226;&#128;&#153; are the same file
[2025-06-05 23:52:51] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-05 23:52:51] + umask 077
[2025-06-05 23:52:51] ++ date +%s
[2025-06-05 23:52:51] + ACCOUNTING_STARTTIME=1749181784
[2025-06-05 23:52:51] + echo 'Detecting resource accounting method available for the job.'
[2025-06-05 23:52:51] Detecting resource accounting method available for the job.
[2025-06-05 23:52:51] + JOB_ACCOUNTING=
[2025-06-05 23:52:51] + command -v arc-job-cgroup
[2025-06-05 23:52:51] + '[' -z '' ']'
[2025-06-05 23:52:51] + GNU_TIME=/usr/bin/time
[2025-06-05 23:52:51] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-05 23:52:51] Looking for /usr/bin/time tool for accounting measurements
[2025-06-05 23:52:51] + '[' '!' -z /usr/bin/time ']'
[2025-06-05 23:52:51] + /usr/bin/time --version
[2025-06-05 23:52:51] + echo 'GNU time found and will be used for job accounting.'
[2025-06-05 23:52:51] GNU time found and will be used for job accounting.
[2025-06-05 23:52:51] + JOB_ACCOUNTING=gnutime
[2025-06-05 23:52:51] + '[' -z gnutime ']'
[2025-06-05 23:52:51] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-05 23:52:51] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-05 23:52:51] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677658130.out
[2025-06-05 23:52:51] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677658130.out
[2025-06-05 23:52:51] + export PILOT_NOKILL=YES
[2025-06-05 23:52:51] + PILOT_NOKILL=YES
[2025-06-05 23:52:51] + export GRID_GLOBAL_JOBID=GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn
[2025-06-05 23:52:51] + GRID_GLOBAL_JOBID=GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn
[2025-06-05 23:52:51] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn
[2025-06-05 23:52:51] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn
[2025-06-05 23:52:51] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-05 23:52:51] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-05 23:52:51] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-05 23:52:51] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/4
[2025-06-05 23:52:51] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/4/log.45006595._034928.job.log.1
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/4/log.45006595._034928.job.log.1
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/4.diag
[2025-06-05 23:52:51] + '[' '!' -z '' ']'
[2025-06-05 23:52:51] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-05 23:52:51] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-05 23:52:51] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-05 23:52:51] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-05 23:52:51] + '[' '!' -z '' ']'
[2025-06-05 23:52:51] + '[' -z yes ']'
[2025-06-05 23:52:51] ++ pwd
[2025-06-05 23:52:51] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/4/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag
[2025-06-05 23:52:51] + runtimeenvironments=
[2025-06-05 23:52:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-05 23:52:51] + RTE_function_0 1
[2025-06-05 23:52:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-05 23:52:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-05 23:52:51] + export BOINC_APP=ATLAS
[2025-06-05 23:52:51] + BOINC_APP=ATLAS
[2025-06-05 23:52:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-05 23:52:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-05 23:52:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-05 23:52:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-05 23:52:51] + '[' -z 1 ']'
[2025-06-05 23:52:51] + '[' 1 == 1 ']'
[2025-06-05 23:52:51] + shift
[2025-06-05 23:52:51] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/4/
[2025-06-05 23:52:51] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/4/
[2025-06-05 23:52:51] + '[' 0 -ne 0 ']'
[2025-06-05 23:52:51] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-05 23:52:51] + '[' -f /etc/os-release ']'
[2025-06-05 23:52:51] +++ cat /etc/os-release
[2025-06-05 23:52:51] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-05 23:52:51] +++ NAME='CentOS Linux'
[2025-06-05 23:52:51] +++ VERSION='7 (Core)'
[2025-06-05 23:52:51] +++ ID=centos
[2025-06-05 23:52:51] +++ ID_LIKE='rhel fedora'
[2025-06-05 23:52:51] +++ VERSION_ID=7
[2025-06-05 23:52:51] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-05 23:52:51] +++ ANSI_COLOR='0;31'
[2025-06-05 23:52:51] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-05 23:52:51] +++ HOME_URL=https://www.centos.org/
[2025-06-05 23:52:51] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-05 23:52:51] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-05 23:52:51] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-05 23:52:51] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-05 23:52:51] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-05 23:52:51] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-05 23:52:51] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-05 23:52:51] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-05 23:52:51] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-05 23:52:51] + HOME=/tmp/boinchome/slots/4
[2025-06-05 23:52:51] + export HOME
[2025-06-05 23:52:51] + cd /tmp/boinchome/slots/4
[2025-06-05 23:52:51] + '[' '!' -z '' ']'
[2025-06-05 23:52:51] + '[' -z '' ']'
[2025-06-05 23:52:51] ++ /bin/hostname -f
[2025-06-05 23:52:51] + nodename=c-16-16.aglt2.org
[2025-06-05 23:52:51] + echo nodename=c-16-16.aglt2.org
[2025-06-05 23:52:51] + echo Processors=2
[2025-06-05 23:52:51] + echo Nodecount=1
[2025-06-05 23:52:51] + echo Benchmark=HEPSPEC:1.0
[2025-06-05 23:52:51] + executable=./runpilot2-wrapper.sh
[2025-06-05 23:52:51] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-05 23:52:51] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-05 23:52:51] ++ head -n 1
[2025-06-05 23:52:51] ++ tr -d '\0'
[2025-06-05 23:52:51] + line1='#!/bin/bash'
[2025-06-05 23:52:51] ++ echo '#!/bin/bash'
[2025-06-05 23:52:51] ++ sed -n 's/^#! *//p'
[2025-06-05 23:52:51] + shebang=/bin/bash
[2025-06-05 23:52:51] ++ echo /bin/bash
[2025-06-05 23:52:51] ++ awk '{print $1}'
[2025-06-05 23:52:51] + interpreter=/bin/bash
[2025-06-05 23:52:51] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-05 23:52:51] + '[' x/bin/bash = x ']'
[2025-06-05 23:52:51] + type /bin/bash
[2025-06-05 23:52:51] + '[' xgnutime = xgnutime ']'
[2025-06-05 23:52:51] + /usr/bin/time -o /tmp/boinchome/slots/4/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-05 23:52:51] + RESULT=2
[2025-06-05 23:52:51] + sed -i -e /nodename=/d /tmp/boinchome/slots/4/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag
[2025-06-05 23:52:51] ++ grep domain_name init_data.xml
[2025-06-05 23:52:51] ++ awk -F '>' '{print $2}'
[2025-06-05 23:52:51] ++ awk -F '<' '{print $1}'
[2025-06-05 23:52:51] ++ sed -e 's# #_#g'
[2025-06-05 23:52:51] + hostname=c-16-16.aglt2.org
[2025-06-05 23:52:51] ++ grep user_name init_data.xml
[2025-06-05 23:52:51] ++ awk -F '>' '{print $2}'
[2025-06-05 23:52:51] ++ awk -F '<' '{print $1}'
[2025-06-05 23:52:51] ++ sed -e 's# #_#g'
[2025-06-05 23:52:51] + username=AGLT2
[2025-06-05 23:52:51] + nodename=AGLT2@c-16-16.aglt2.org
[2025-06-05 23:52:51] + echo nodename=AGLT2@c-16-16.aglt2.org
[2025-06-05 23:52:51] + '[' -n 10 ']'
[2025-06-05 23:52:51] + sed -i -e s/Processors=1/Processors=10/ /tmp/boinchome/slots/4/GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag
[2025-06-05 23:52:51] + echo exitcode=2
[2025-06-05 23:52:51] + runtimeenvironments=
[2025-06-05 23:52:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-05 23:52:51] + RTE_function_0 2
[2025-06-05 23:52:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-05 23:52:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-05 23:52:51] + export BOINC_APP=ATLAS
[2025-06-05 23:52:51] + BOINC_APP=ATLAS
[2025-06-05 23:52:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-05 23:52:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-05 23:52:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-05 23:52:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-05 23:52:51] + '[' -z 2 ']'
[2025-06-05 23:52:51] + '[' 2 == 1 ']'
[2025-06-05 23:52:51] + '[' 0 -ne 0 ']'
[2025-06-05 23:52:51] + echo 'zip all output files'
[2025-06-05 23:52:51] + flist='*.diag '
[2025-06-05 23:52:51] + for f in ./heartbeat.json ./output.list ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1 ./gmlog/
[2025-06-05 23:52:51] + '[' -e ./heartbeat.json ']'
[2025-06-05 23:52:51] + flist='*.diag  ./heartbeat.json'
[2025-06-05 23:52:51] + for f in ./heartbeat.json ./output.list ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1 ./gmlog/
[2025-06-05 23:52:51] + '[' -e ./output.list ']'
[2025-06-05 23:52:51] + for f in ./heartbeat.json ./output.list ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1 ./gmlog/
[2025-06-05 23:52:51] + '[' -e ./log.45006595._034928.job.log.1 ']'
[2025-06-05 23:52:51] + flist='*.diag  ./heartbeat.json ./log.45006595._034928.job.log.1'
[2025-06-05 23:52:51] + for f in ./heartbeat.json ./output.list ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1 ./gmlog/
[2025-06-05 23:52:51] + '[' -e ./log.45006595._034928.job.log.1 ']'
[2025-06-05 23:52:51] + flist='*.diag  ./heartbeat.json ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1'
[2025-06-05 23:52:51] + for f in ./heartbeat.json ./output.list ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1 ./gmlog/
[2025-06-05 23:52:51] + '[' -e ./gmlog/ ']'
[2025-06-05 23:52:51] + '[' -f output.list ']'
[2025-06-05 23:52:51] + tar cvf result.tar.gz GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag ./heartbeat.json ./log.45006595._034928.job.log.1 ./log.45006595._034928.job.log.1
[2025-06-05 23:52:51] + '[' xgnutime = xcgroup ']'
[2025-06-05 23:52:51] + '[' -n '' ']'
[2025-06-05 23:52:51] + '[' -n '' ']'
[2025-06-05 23:52:51] ++ date +%s
[2025-06-05 23:52:51] + ACCOUNTING_ENDTIME=1749181971
[2025-06-05 23:52:51] ++ date -d '1970-01-01 UTC 1749181784 seconds' +%Y%m%d%H%M%SZ
[2025-06-05 23:52:51] + echo LRMSStartTime=20250605234944Z
[2025-06-05 23:52:51] ++ date -d '1970-01-01 UTC 1749181971 seconds' +%Y%m%d%H%M%SZ
[2025-06-05 23:52:51] + echo LRMSEndTime=20250605235251Z
[2025-06-05 23:52:51] + echo walltime=187
[2025-06-05 23:52:51] + echo exitcode=2
[2025-06-05 23:52:51] + exit 2
[2025-06-05 23:52:51] ./pilot3/pilot/util/loggingsupport.py
[2025-06-05 23:52:51] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-05 23:52:51] ./pilot3/pilot/util/realtimelogger.py
[2025-06-05 23:52:51] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-05 23:52:51] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-05 23:52:51] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-05 23:52:51] ./PanDA_Pilot-6677658130/prmon.log
[2025-06-05 23:52:51] ./PanDA_Pilot-6677658130/log.EVNTtoHITS
[2025-06-05 23:52:51] ./PanDA_Pilot-6677658130/PoolFileCatalog.xml
[2025-06-05 23:52:51] ./PanDA_Pilot-6677658130/pilotlog.txt
[2025-06-05 23:52:51] ./log.45006595._034928.job.log.1
[2025-06-05 23:52:51] ./log.45006595._034928.job.log.tgz.1
[2025-06-05 23:52:51] ./runtime_log
[2025-06-05 23:52:51] ./runtime_log.err
[2025-06-05 23:52:51] ./pilotlog.txt
00:03:59 (578527): wrapper (7.7.26015): starting
00:03:59 (578527): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 00:03:59] Arguments: --nthreads 10
[2025-06-06 00:03:59] Threads: 10
[2025-06-06 00:03:59] This job has been restarted, cleaning up previous attempt
[2025-06-06 00:03:59] Checking for CVMFS
[2025-06-06 00:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:04:00] 2.12.6.0 3989 329 104740 146842 3 409 15555027 21042176 8281 16776704 0 486270 95.815 3602330 44092 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 00:04:00] CVMFS is ok
[2025-06-06 00:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:04:00] Further information can be found at the LHC@home message board.
[2025-06-06 00:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:04:00] Checking for apptainer binary...
[2025-06-06 00:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:04:00] Running /usr/bin/apptainer --version
[2025-06-06 00:04:00] apptainer version 1.4.1-1.el9
[2025-06-06 00:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:04:00] c-16-16.aglt2.org
[2025-06-06 00:04:00] apptainer works
[2025-06-06 00:04:00] Set ATHENA_PROC_NUMBER=10
[2025-06-06 00:04:00] Set ATHENA_CORE_NUMBER=10
[2025-06-06 00:04:00] Starting ATLAS job with PandaID=6677658130
[2025-06-06 00:04:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:31:02]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:31:02] 2025-06-06 07:30:49,687 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 03:31:02] 2025-06-06 07:30:49,688 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677658130/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,688 | INFO     | extracted standard info from prmon json
[2025-06-06 03:31:02] 2025-06-06 07:30:49,689 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:31:02] 2025-06-06 07:30:49,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:31:02] 2025-06-06 07:30:49,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:31:02] 2025-06-06 07:30:49,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:31:02] 2025-06-06 07:30:49,696 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:31:02] 2025-06-06 07:30:49,696 | INFO     | sum of square deviations: 2555464826.9950557
[2025-06-06 03:31:02] 2025-06-06 07:30:49,698 | INFO     | sum of deviations: 36378299245.17819
[2025-06-06 03:31:02] 2025-06-06 07:30:49,698 | INFO     | mean x: 1749188835.0049505
[2025-06-06 03:31:02] 2025-06-06 07:30:49,698 | INFO     | mean y: 2187414.8217821782
[2025-06-06 03:31:02] 2025-06-06 07:30:49,698 | INFO     | -- intersect: -24898376351.089848
[2025-06-06 03:31:02] 2025-06-06 07:30:49,698 | INFO     | intersect: -24898376351.089848
[2025-06-06 03:31:02] 2025-06-06 07:30:49,699 | INFO     | chi2: 1.5927492876299185
[2025-06-06 03:31:02] 2025-06-06 07:30:49,699 | INFO     | sum of square deviations: 2370366883.1878204
[2025-06-06 03:31:02] 2025-06-06 07:30:49,701 | INFO     | sum of deviations: 37355294309.959404
[2025-06-06 03:31:02] 2025-06-06 07:30:49,701 | INFO     | mean x: 1749188682.5177665
[2025-06-06 03:31:02] 2025-06-06 07:30:49,701 | INFO     | mean y: 2188199.725888325
[2025-06-06 03:31:02] 2025-06-06 07:30:49,701 | INFO     | -- intersect: -27563779964.335682
[2025-06-06 03:31:02] 2025-06-06 07:30:49,701 | INFO     | intersect: -27563779964.335682
[2025-06-06 03:31:02] 2025-06-06 07:30:49,702 | INFO     | chi2: 1.574051968296133
[2025-06-06 03:31:02] 2025-06-06 07:30:49,702 | INFO     | current chi2=1.574051968296133 (change=1.1739022254788158 %)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,702 | INFO     | right removable region: 196
[2025-06-06 03:31:02] 2025-06-06 07:30:49,703 | INFO     | sum of square deviations: 2370304663.1878204
[2025-06-06 03:31:02] 2025-06-06 07:30:49,704 | INFO     | sum of deviations: 8666186354.365477
[2025-06-06 03:31:02] 2025-06-06 07:30:49,704 | INFO     | mean x: 1749188987.5177665
[2025-06-06 03:31:02] 2025-06-06 07:30:49,704 | INFO     | mean y: 2210026.4670050764
[2025-06-06 03:31:02] 2025-06-06 07:30:49,705 | INFO     | -- intersect: -6393085046.88689
[2025-06-06 03:31:02] 2025-06-06 07:30:49,705 | INFO     | intersect: -6393085046.88689
[2025-06-06 03:31:02] 2025-06-06 07:30:49,705 | INFO     | chi2: 0.2395958350768206
[2025-06-06 03:31:02] 2025-06-06 07:30:49,705 | INFO     | current chi2=0.2395958350768206 (change=84.95709042611786 %)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,706 | INFO     | sum of square deviations: 2194307461.8125
[2025-06-06 03:31:02] 2025-06-06 07:30:49,707 | INFO     | sum of deviations: 14968367796.312508
[2025-06-06 03:31:02] 2025-06-06 07:30:49,707 | INFO     | mean x: 1749189140.03125
[2025-06-06 03:31:02] 2025-06-06 07:30:49,708 | INFO     | mean y: 2204535.9479166665
[2025-06-06 03:31:02] 2025-06-06 07:30:49,708 | INFO     | -- intersect: -11929809025.942156
[2025-06-06 03:31:02] 2025-06-06 07:30:49,708 | INFO     | intersect: -11929809025.942156
[2025-06-06 03:31:02] 2025-06-06 07:30:49,708 | INFO     | chi2: 0.16034591931544123
[2025-06-06 03:31:02] 2025-06-06 07:30:49,708 | INFO     | current chi2=0.16034591931544123 (change=33.07649973797325 %)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,709 | INFO     | sum of square deviations: 2027298852.6844926
[2025-06-06 03:31:02] 2025-06-06 07:30:49,710 | INFO     | sum of deviations: 13540278580.96257
[2025-06-06 03:31:02] 2025-06-06 07:30:49,710 | INFO     | mean x: 1749189292.5187166
[2025-06-06 03:31:02] 2025-06-06 07:30:49,711 | INFO     | mean y: 2205886.0106951874
[2025-06-06 03:31:02] 2025-06-06 07:30:49,711 | INFO     | -- intersect: -11680585864.291872
[2025-06-06 03:31:02] 2025-06-06 07:30:49,711 | INFO     | intersect: -11680585864.291872
[2025-06-06 03:31:02] 2025-06-06 07:30:49,711 | INFO     | chi2: 0.12614872083877193
[2025-06-06 03:31:02] 2025-06-06 07:30:49,711 | INFO     | current chi2=0.12614872083877193 (change=21.32713986278298 %)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,712 | INFO     | left removable region: 30
[2025-06-06 03:31:02] 2025-06-06 07:30:49,712 | INFO     | sum of square deviations: 1418075159.9036167
[2025-06-06 03:31:02] 2025-06-06 07:30:49,713 | INFO     | sum of deviations: 8841121111.72289
[2025-06-06 03:31:02] 2025-06-06 07:30:49,713 | INFO     | mean x: 1749189567.0240965
[2025-06-06 03:31:02] 2025-06-06 07:30:49,714 | INFO     | mean y: 2214822.8192771086
[2025-06-06 03:31:02] 2025-06-06 07:30:49,714 | INFO     | -- intersect: -10903269771.151941
[2025-06-06 03:31:02] 2025-06-06 07:30:49,714 | INFO     | intersect: -10903269771.151941
[2025-06-06 03:31:02] 2025-06-06 07:30:49,714 | INFO     | chi2: 0.0924216548503766
[2025-06-06 03:31:02] 2025-06-06 07:30:49,714 | INFO     | -- intersect: -10903269771.151941
[2025-06-06 03:31:02] 2025-06-06 07:30:49,715 | INFO     | current memory leak: 6.23 B/s (using 166 data points, chi2=0.09)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,715 | INFO     | ..............................
[2025-06-06 03:31:02] 2025-06-06 07:30:49,715 | INFO     | . Timing measurements:
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . get job = 0 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . initial setup = 1 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . payload setup = 12 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . stage-in = 0 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . payload execution = 12329 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,716 | INFO     | . stage-out = 14 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,717 | INFO     | . log creation = 0 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,717 | INFO     | ..............................
[2025-06-06 03:31:02] 2025-06-06 07:30:49,953 | INFO     | 
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | job summary report
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | --------------------------------------------------
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | PanDA job id: 6677658130
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | task id: 45006595
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | errors: (none)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:31:02] 2025-06-06 07:30:49,954 | INFO     | pilot state: finished 
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | transexitcode: 0
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | exeerrorcode: 0
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | exeerrordiag: 
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | exitcode: 0
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | exitmsg: OK
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | cpuconsumptiontime: 65713 s
[2025-06-06 03:31:02] 2025-06-06 07:30:49,955 | INFO     | nevents: 400
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | neventsw: 0
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | pid: 592027
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | pgrp: 592027
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | corecount: 10
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | event service: False
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | sizes: {0: 2397171, 1: 2397370, 8: 2397576, 12: 2397604, 12345: 2427355, 12360: 2436296, 12364: 2436480, 12368: 2436650}
[2025-06-06 03:31:02] 2025-06-06 07:30:49,956 | INFO     | --------------------------------------------------
[2025-06-06 03:31:02] 2025-06-06 07:30:49,957 | INFO     | 
[2025-06-06 03:31:02] 2025-06-06 07:30:49,957 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-06 03:31:02] 2025-06-06 07:30:49,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,969 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:31:02] 2025-06-06 07:30:49,972 | INFO     | job 6677658130 has completed (purged errors)
[2025-06-06 03:31:02] 2025-06-06 07:30:49,972 | INFO     | overall cleanup function is called
[2025-06-06 03:31:02] 2025-06-06 07:30:50,981 | INFO     | --- collectZombieJob: --- 10, [592027]
[2025-06-06 03:31:02] 2025-06-06 07:30:50,981 | INFO     | zombie collector waiting for pid 592027
[2025-06-06 03:31:02] 2025-06-06 07:30:50,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:31:02] 2025-06-06 07:30:50,981 | INFO     | collected zombie processes
[2025-06-06 03:31:02] 2025-06-06 07:30:50,981 | INFO     | will attempt to kill all subprocesses of pid=592027
[2025-06-06 03:31:02] 2025-06-06 07:30:51,228 | INFO     | process IDs to be killed: [592027] (in reverse order)
[2025-06-06 03:31:02] 2025-06-06 07:30:51,315 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:31:02] 2025-06-06 07:30:51,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:31:02] 2025-06-06 07:30:51,325 | INFO     | did not find any defunct processes belonging to 592027
[2025-06-06 03:31:02] 2025-06-06 07:30:51,334 | INFO     | did not find any defunct processes belonging to 592027
[2025-06-06 03:31:02] 2025-06-06 07:30:51,334 | INFO     | ready for new job
[2025-06-06 03:31:02] 2025-06-06 07:30:51,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:31:02] 2025-06-06 07:30:51,336 | INFO     | **************************************
[2025-06-06 03:31:02] 2025-06-06 07:30:51,336 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:31:02] 2025-06-06 07:30:51,336 | INFO     | **************************************
[2025-06-06 03:31:02] 2025-06-06 07:30:51,336 | INFO     | 
[2025-06-06 03:31:02] 2025-06-06 07:30:51,350 | INFO     | architecture information:
[2025-06-06 03:31:02] 2025-06-06 07:30:51,350 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:31:02] 2025-06-06 07:30:51,359 | INFO     | cat /etc/os-release:
[2025-06-06 03:31:02] NAME="CentOS Linux"
[2025-06-06 03:31:02] VERSION="7 (Core)"
[2025-06-06 03:31:02] ID="centos"
[2025-06-06 03:31:02] ID_LIKE="rhel fedora"
[2025-06-06 03:31:02] VERSION_ID="7"
[2025-06-06 03:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:31:02] ANSI_COLOR="0;31"
[2025-06-06 03:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:31:02] HOME_URL="https://www.centos.org/"
[2025-06-06 03:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:31:02] 
[2025-06-06 03:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:31:02] 
[2025-06-06 03:31:02] 2025-06-06 07:30:51,360 | INFO     | **************************************
[2025-06-06 03:31:02] 2025-06-06 07:30:51,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-06 03:31:02] 2025-06-06 07:30:51,872 | INFO     | sufficient remaining disk space (52651098112 B)
[2025-06-06 03:31:02] 2025-06-06 07:30:51,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:31:02] 2025-06-06 07:30:51,873 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:31:02] 2025-06-06 07:30:51,873 | INFO     | update_server=False
[2025-06-06 03:31:02] 2025-06-06 07:30:51,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:31:02] 2025-06-06 07:30:51,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:31:02] 2025-06-06 07:30:52,294 | INFO     | all data control threads have been joined
[2025-06-06 03:31:02] 2025-06-06 07:30:52,321 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:31:02] 2025-06-06 07:30:52,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:31:02] 2025-06-06 07:30:52,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:31:02] 2025-06-06 07:30:52,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:31:02] 2025-06-06 07:30:52,420 | INFO     | aborting loop
[2025-06-06 03:31:02] 2025-06-06 07:30:52,878 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:52,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,033 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,141 | INFO     | all payload control threads have been joined
[2025-06-06 03:31:02] 2025-06-06 07:30:53,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:31:02] 2025-06-06 07:30:53,299 | INFO     | [data] control thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,343 | INFO     | all job control threads have been joined
[2025-06-06 03:31:02] 2025-06-06 07:30:53,415 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,425 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,558 | INFO     | [job] validate thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:53,833 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,003 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,110 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,146 | INFO     | [payload] control thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,222 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,349 | INFO     | [job] control thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:54,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:31:02] 2025-06-06 07:30:55,249 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:55,819 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:55,971 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:31:02] 2025-06-06 07:30:57,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288148506432)>', '<ExcThread(monitor, started 140287473063680)>']
[2025-06-06 03:31:02] 2025-06-06 07:30:57,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:31:02] 2025-06-06 07:30:57,347 | INFO     | [monitor] control thread has ended
[2025-06-06 03:31:02] 2025-06-06 07:31:02,095 | INFO     | all workflow threads have been joined
[2025-06-06 03:31:02] 2025-06-06 07:31:02,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:31:02] 2025-06-06 07:31:02,357 | INFO     | traces error code: 0
[2025-06-06 03:31:02] 2025-06-06 07:31:02,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:31:02] 2025-06-06 07:31:02,473 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:31:02] 2025-06-06 07:31:02,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:31:02] 2025-06-06 07:31:02,476 [wrapper] pilotpid: 583580
[2025-06-06 03:31:02] 2025-06-06 07:31:02,478 [wrapper] Pilot exit status: 0
[2025-06-06 03:31:02] 2025-06-06 07:31:02,492 [wrapper] pandaids: 6677658130 6677658130 6677658130
[2025-06-06 03:31:02] 2025-06-06 07:31:02,555 [wrapper] cleanup supervisor_pilot 1149715 583581
[2025-06-06 03:31:02] 2025-06-06 07:31:02,557 [wrapper] Test setup, not cleaning
[2025-06-06 03:31:02] 2025-06-06 07:31:02,558 [wrapper] apfmon messages muted
[2025-06-06 03:31:02] 2025-06-06 07:31:02,560 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:31:02] 2025-06-06 07:31:02,562 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:31:02]  *** Error codes and diagnostics ***
[2025-06-06 03:31:02]     "exeErrorCode": 0,
[2025-06-06 03:31:02]     "exeErrorDiag": "",
[2025-06-06 03:31:02]     "pilotErrorCode": 0,
[2025-06-06 03:31:02]     "pilotErrorDiag": "",
[2025-06-06 03:31:02]  *** Listing of results directory ***
[2025-06-06 03:31:02] total 600228
[2025-06-06 03:31:02] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:07 queuedata.json
[2025-06-06 03:31:02] -rwx------. 1 boincer umatlas     37140 Jun  3 10:07 runpilot2-wrapper.sh
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:31:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:43 run_atlas
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:43 job.xml
[2025-06-06 03:31:02] -rw-r--r--. 3 boincer umatlas 214245781 Jun  3 12:43 EVNT.45006593._001404.pool.root.1
[2025-06-06 03:31:02] -rw-r--r--. 3 boincer umatlas 214245781 Jun  3 12:43 ATLAS.root_0
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:43 start_atlas.sh
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 12:43 input.tar.gz
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:43 boinc_lockfile
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas         0 Jun  5 23:49 wrapper_sigint_547430
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas         0 Jun  5 23:52 wrapper_sigkill_547430
[2025-06-06 03:31:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 23:52 shared
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 00:04 pandaJob.out
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas    987721 Jun  6 00:04 agis_schedconf.cvmfs.json
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas      6523 Jun  6 03:29 init_data.xml
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas 179314061 Jun  6 03:29 HITS.45006595._034928.pool.root.1
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas       533 Jun  6 03:30 boinc_task_state.xml
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas        99 Jun  6 03:30 pilot_heartbeat.json
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas      1048 Jun  6 03:30 memory_monitor_summary.json
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas   1598969 Jun  6 03:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas    410301 Jun  6 03:30 log.45006595._034928.job.log.tgz.1
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas      7732 Jun  6 03:30 heartbeat.json
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 03:31 boinc_mmap_file
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas        29 Jun  6 03:31 wrapper_checkpoint.txt
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas      4353 Jun  6 03:31 pilotlog.txt
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas   1070449 Jun  6 03:31 log.45006595._034928.job.log.1
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas       357 Jun  6 03:31 output.list
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas       620 Jun  6 03:31 runtime_log
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas   1505280 Jun  6 03:31 result.tar.gz
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas      8742 Jun  6 03:31 runtime_log.err
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas      1886 Jun  6 03:31 GE5NDm4Thg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUkKDmVC7otn.diag
[2025-06-06 03:31:02] -rw-r--r--. 1 boincer umatlas     38236 Jun  6 03:31 stderr.txt
[2025-06-06 03:31:02] HITS file was successfully produced:
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas 179314061 Jun  6 03:29 shared/HITS.pool.root.1
[2025-06-06 03:31:02]  *** Contents of shared directory: ***
[2025-06-06 03:31:02] total 386332
[2025-06-06 03:31:02] -rw-r--r--. 3 boincer umatlas 214245781 Jun  3 12:43 ATLAS.root_0
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:43 start_atlas.sh
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 12:43 input.tar.gz
[2025-06-06 03:31:02] -rw-------. 1 boincer umatlas 179314061 Jun  6 03:29 HITS.pool.root.1
[2025-06-06 03:31:02] -rw-r--r--. 2 boincer umatlas   1505280 Jun  6 03:31 result.tar.gz
03:31:03 (578527): run_atlas exited; CPU time 66013.660694
03:31:03 (578527): called boinc_finish(0)

</stderr_txt>
]]>


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