Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:39:59 (2151755): wrapper (7.7.26015): starting
12:39:59 (2151755): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:39:59] Arguments: --nthreads 8
[2025-06-03 12:39:59] Threads: 8
[2025-06-03 12:39:59] Checking for CVMFS
[2025-06-03 12:39:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:39:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:39:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:40:00] 2.12.6.0 907015 32189 402668 146749 2 201 19866988 25181184 4572 16776704 1 126715654 99.464 164371900 23024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:40:00] CVMFS is ok
[2025-06-03 12:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:40:00] Further information can be found at the LHC@home message board.
[2025-06-03 12:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:40:00] Checking for apptainer binary...
[2025-06-03 12:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:40:00] Running /usr/bin/apptainer --version
[2025-06-03 12:40:00] apptainer version 1.4.1-1.el9
[2025-06-03 12:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:40:00] c-16-38.aglt2.org
[2025-06-03 12:40:00] apptainer works
[2025-06-03 12:40:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:40:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:40:00] Starting ATLAS job with PandaID=6677617884
[2025-06-03 12:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:21:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:21:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 14:21:36]  is_altstaged=None
[2025-06-03 14:21:36]  is_tar=False
[2025-06-03 14:21:36]  lfn=log.45006595._032161.job.log.tgz.1
[2025-06-03 14:21:36]  mtime=0
[2025-06-03 14:21:36]  protocol_id=None
[2025-06-03 14:21:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:21:36]  replicas=None
[2025-06-03 14:21:36]  scope=mc23_13p6TeV
[2025-06-03 14:21:36]  status=None
[2025-06-03 14:21:36]  status_code=0
[2025-06-03 14:21:36]  storage_token=
[2025-06-03 14:21:36]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6677617884/log.45006595._032161.job.log.tgz.1
[2025-06-03 14:21:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/2f/log.45006595._032161.job.log.tgz.1
[2025-06-03 14:21:36]  workdir=None
[2025-06-03 14:21:36] ]
[2025-06-03 14:21:36] 2025-06-03 18:21:07,548 | INFO     | transferring file log.45006595._032161.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6677617884/log.45006595._032161.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:21:36] 2025-06-03 18:21:07,548 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6677617884/log.45006595._032161.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._032161.job
[2025-06-03 14:21:36] 2025-06-03 18:21:07,565 | INFO     | adding to output.list: log.45006595._032161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/2f/log.45006595._032161.job.log.tg
[2025-06-03 14:21:36] 2025-06-03 18:21:07,566 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:21:36] 2025-06-03 18:21:07,566 | INFO     | summary of transferred files:
[2025-06-03 14:21:36] 2025-06-03 18:21:07,566 | INFO     |  -- lfn=log.45006595._032161.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:21:36] 2025-06-03 18:21:07,567 | INFO     | stage-out finished correctly
[2025-06-03 14:21:36] 2025-06-03 18:21:08,634 | INFO     | monitor loop #434: job 0:6677617884 is in state 'finished'
[2025-06-03 14:21:36] 2025-06-03 18:21:08,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:21:36] 2025-06-03 18:21:11,139 | INFO     | monitor loop #435: job 0:6677617884 is in state 'finished'
[2025-06-03 14:21:36] 2025-06-03 18:21:11,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:21:36] 2025-06-03 18:21:11,162 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:21:36] 2025-06-03 18:21:11,231 | INFO     | job 6677617884 has state=finished
[2025-06-03 14:21:36] 2025-06-03 18:21:11,231 | INFO     | preparing for final server update for job 6677617884 in state='finished'
[2025-06-03 14:21:36] 2025-06-03 18:21:11,231 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:21:36] 2025-06-03 18:21:11,232 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:21:36] 2025-06-03 18:21:11,232 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:21:36] 2025-06-03 18:21:11,232 | INFO     | job 6677617884 has finished - writing final server update
[2025-06-03 14:21:36] 2025-06-03 18:21:11,232 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:21:36] 2025-06-03 18:21:11,247 | INFO     | executing command: lscpu
[2025-06-03 14:21:36] 2025-06-03 18:21:11,311 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:21:36] 2025-06-03 18:21:13,645 | INFO     | monitor loop #436: job 0:6677617884 is in state 'finished'
[2025-06-03 14:21:36] 2025-06-03 18:21:13,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:21:36] 2025-06-03 18:21:15,649 | INFO     | 6068s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 14:21:36] 2025-06-03 18:21:15,998 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 14:21:36] 2025-06-03 18:21:15,998 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677617884/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:21:36] 2025-06-03 18:21:15,999 | INFO     | extracted standard info from prmon json
[2025-06-03 14:21:36] 2025-06-03 18:21:15,999 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:21:36] 2025-06-03 18:21:15,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:21:36] 2025-06-03 18:21:16,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:21:36] 2025-06-03 18:21:16,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:21:36] 2025-06-03 18:21:16,002 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:21:36] 2025-06-03 18:21:16,003 | INFO     | sum of square deviations: 241429643.0
[2025-06-03 14:21:36] 2025-06-03 18:21:16,003 | INFO     | sum of deviations: 8574509011.500001
[2025-06-03 14:21:36] 2025-06-03 18:21:16,003 | INFO     | mean x: 1748971915.5
[2025-06-03 14:21:36] 2025-06-03 18:21:16,004 | INFO     | mean y: 2156344.815217391
[2025-06-03 14:21:36] 2025-06-03 18:21:16,004 | INFO     | -- intersect: -62113560946.43376
[2025-06-03 14:21:36] 2025-06-03 18:21:16,004 | INFO     | intersect: -62113560946.43376
[2025-06-03 14:21:36] 2025-06-03 18:21:16,004 | INFO     | chi2: 1.1009425585435895
[2025-06-03 14:21:36] 2025-06-03 18:21:16,004 | INFO     | -- intersect: -62113560946.43376
[2025-06-03 14:21:36] 2025-06-03 18:21:16,005 | INFO     | current memory leak: 35.52 B/s (using 92 data points, chi2=1.10)
[2025-06-03 14:21:36] 2025-06-03 18:21:16,005 | INFO     | ..............................
[2025-06-03 14:21:36] 2025-06-03 18:21:16,005 | INFO     | . Timing measurements:
[2025-06-03 14:21:36] 2025-06-03 18:21:16,005 | INFO     | . get job = 0 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . initial setup = 2 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . payload setup = 6 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . stage-in = 0 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . payload execution = 6031 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . stage-out = 1 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | . log creation = 0 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,006 | INFO     | ..............................
[2025-06-03 14:21:36] 2025-06-03 18:21:16,123 | INFO     | 
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | job summary report
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | --------------------------------------------------
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | PanDA job id: 6677617884
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | task id: 45006595
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | errors: (none)
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:21:36] 2025-06-03 18:21:16,124 | INFO     | pilot state: finished 
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | transexitcode: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | exeerrorcode: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | exeerrordiag: 
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | exitcode: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | exitmsg: OK
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | cpuconsumptiontime: 41835 s
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | nevents: 400
[2025-06-03 14:21:36] 2025-06-03 18:21:16,125 | INFO     | neventsw: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | pid: 2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | pgrp: 2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | corecount: 8
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | event service: False
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 6041: 2432216, 6042: 2441157, 6046: 2441341, 6051: 2441511}
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | --------------------------------------------------
[2025-06-03 14:21:36] 2025-06-03 18:21:16,126 | INFO     | 
[2025-06-03 14:21:36] 2025-06-03 18:21:16,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 14:21:36] 2025-06-03 18:21:16,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:21:36] 2025-06-03 18:21:16,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:21:36] 2025-06-03 18:21:16,147 | INFO     | job 6677617884 has completed (purged errors)
[2025-06-03 14:21:36] 2025-06-03 18:21:16,147 | INFO     | overall cleanup function is called
[2025-06-03 14:21:36] 2025-06-03 18:21:17,155 | INFO     | --- collectZombieJob: --- 10, [2162135]
[2025-06-03 14:21:36] 2025-06-03 18:21:17,155 | INFO     | zombie collector waiting for pid 2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:17,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:21:36] 2025-06-03 18:21:17,155 | INFO     | collected zombie processes
[2025-06-03 14:21:36] 2025-06-03 18:21:17,155 | INFO     | will attempt to kill all subprocesses of pid=2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:17,412 | INFO     | process IDs to be killed: [2162135] (in reverse order)
[2025-06-03 14:21:36] 2025-06-03 18:21:17,516 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:21:36] 2025-06-03 18:21:17,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:21:36] 2025-06-03 18:21:17,530 | INFO     | did not find any defunct processes belonging to 2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:17,543 | INFO     | did not find any defunct processes belonging to 2162135
[2025-06-03 14:21:36] 2025-06-03 18:21:17,544 | INFO     | ready for new job
[2025-06-03 14:21:36] 2025-06-03 18:21:17,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:21:36] 2025-06-03 18:21:17,546 | INFO     | **************************************
[2025-06-03 14:21:36] 2025-06-03 18:21:17,546 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:21:36] 2025-06-03 18:21:17,546 | INFO     | **************************************
[2025-06-03 14:21:36] 2025-06-03 18:21:17,547 | INFO     | 
[2025-06-03 14:21:36] 2025-06-03 18:21:17,563 | INFO     | architecture information:
[2025-06-03 14:21:36] 2025-06-03 18:21:17,563 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:21:36] 2025-06-03 18:21:17,576 | INFO     | cat /etc/os-release:
[2025-06-03 14:21:36] NAME="CentOS Linux"
[2025-06-03 14:21:36] VERSION="7 (Core)"
[2025-06-03 14:21:36] ID="centos"
[2025-06-03 14:21:36] ID_LIKE="rhel fedora"
[2025-06-03 14:21:36] VERSION_ID="7"
[2025-06-03 14:21:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:21:36] ANSI_COLOR="0;31"
[2025-06-03 14:21:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:21:36] HOME_URL="https://www.centos.org/"
[2025-06-03 14:21:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:21:36] 
[2025-06-03 14:21:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:21:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:21:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:21:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:21:36] 
[2025-06-03 14:21:36] 2025-06-03 18:21:17,576 | INFO     | **************************************
[2025-06-03 14:21:36] 2025-06-03 18:21:18,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 14:21:36] 2025-06-03 18:21:18,096 | INFO     | sufficient remaining disk space (61898489856 B)
[2025-06-03 14:21:36] 2025-06-03 18:21:18,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:21:36] 2025-06-03 18:21:18,097 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:21:36] 2025-06-03 18:21:18,097 | INFO     | update_server=False
[2025-06-03 14:21:36] 2025-06-03 18:21:18,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:21:36] 2025-06-03 18:21:18,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:21:36] 2025-06-03 18:21:18,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:21:36] 2025-06-03 18:21:18,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:21:36] 2025-06-03 18:21:18,098 | INFO     | aborting loop
[2025-06-03 14:21:36] 2025-06-03 18:21:18,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:21:36] 2025-06-03 18:21:18,210 | INFO     | all data control threads have been joined
[2025-06-03 14:21:36] 2025-06-03 18:21:18,661 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:21:36] 2025-06-03 18:21:18,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:21:36] 2025-06-03 18:21:18,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:21:36] 2025-06-03 18:21:18,824 | INFO     | all job control threads have been joined
[2025-06-03 14:21:36] 2025-06-03 18:21:19,102 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,103 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,103 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,228 | INFO     | [data] control thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,328 | INFO     | all payload control threads have been joined
[2025-06-03 14:21:36] 2025-06-03 18:21:19,372 | INFO     | [job] validate thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,830 | INFO     | [job] control thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,872 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,975 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:19,983 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:20,083 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:20,201 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:20,225 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:20,333 | INFO     | [payload] control thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:20,579 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:22,106 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:28,345 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:21:36] 2025-06-03 18:21:29,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:21:36] 2025-06-03 18:21:30,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907211081536)>', '<ExcThread(monitor, started 139906705762048)>']
[2025-06-03 14:21:36] 2025-06-03 18:21:31,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:21:36] 2025-06-03 18:21:31,732 | INFO     | [monitor] control thread has ended
[2025-06-03 14:21:36] 2025-06-03 18:21:35,942 | INFO     | all workflow threads have been joined
[2025-06-03 14:21:36] 2025-06-03 18:21:35,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:21:36] 2025-06-03 18:21:35,943 | INFO     | traces error code: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:35,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:21:36] 2025-06-03 18:21:36,079 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:21:36] 2025-06-03 18:21:36,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:21:36] 2025-06-03 18:21:36,085 [wrapper] pilotpid: 2155593
[2025-06-03 14:21:36] 2025-06-03 18:21:36,088 [wrapper] Pilot exit status: 0
[2025-06-03 14:21:36] 2025-06-03 18:21:36,099 [wrapper] pandaids: 6677617884
[2025-06-03 14:21:36] 2025-06-03 18:21:36,167 [wrapper] cleanup supervisor_pilot 2428865 2155594
[2025-06-03 14:21:36] 2025-06-03 18:21:36,169 [wrapper] Test setup, not cleaning
[2025-06-03 14:21:36] 2025-06-03 18:21:36,172 [wrapper] apfmon messages muted
[2025-06-03 14:21:36] 2025-06-03 18:21:36,174 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:21:36] 2025-06-03 18:21:36,176 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:21:36]  *** Error codes and diagnostics ***
[2025-06-03 14:21:36]     "exeErrorCode": 0,
[2025-06-03 14:21:36]     "exeErrorDiag": "",
[2025-06-03 14:21:36]     "pilotErrorCode": 0,
[2025-06-03 14:21:36]     "pilotErrorDiag": "",
[2025-06-03 14:21:36]  *** Listing of results directory ***
[2025-06-03 14:21:36] total 386776
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:22 queuedata.json
[2025-06-03 14:21:36] -rwx------. 1 boincer umatlas     37140 Jun  3 08:22 runpilot2-wrapper.sh
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:21:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:39 run_atlas
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:39 job.xml
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas 214370279 Jun  3 12:39 EVNT.45006593._001294.pool.root.1
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:39 start_atlas.sh
[2025-06-03 14:21:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:39 shared
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:39 input.tar.gz
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:39 boinc_lockfile
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:40 pandaJob.out
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas    983734 Jun  3 12:40 agis_schedconf.cvmfs.json
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:21:36] drwx------. 4 boincer umatlas      4096 Jun  3 12:40 pilot3
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 14:18 init_data.xml
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas 176048592 Jun  3 14:20 HITS.45006595._032161.pool.root.1
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:20 boinc_task_state.xml
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas        95 Jun  3 14:21 pilot_heartbeat.json
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas      1034 Jun  3 14:21 memory_monitor_summary.json
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas    328312 Jun  3 14:21 log.45006595._032161.job.log.tgz.1
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas      7710 Jun  3 14:21 heartbeat.json
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:21 wrapper_checkpoint.txt
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:21 boinc_mmap_file
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas      4425 Jun  3 14:21 pilotlog.txt
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas    574870 Jun  3 14:21 log.45006595._032161.job.log.1
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas       357 Jun  3 14:21 output.list
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:21 runtime_log
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas    921600 Jun  3 14:21 result.tar.gz
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 14:21 runtime_log.err
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas       651 Jun  3 14:21 bXDNDmQqfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN2jKDmJAk1vm.diag
[2025-06-03 14:21:36] -rw-r--r--. 1 boincer umatlas     21368 Jun  3 14:21 stderr.txt
[2025-06-03 14:21:36] HITS file was successfully produced:
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas 176048592 Jun  3 14:20 shared/HITS.pool.root.1
[2025-06-03 14:21:36]  *** Contents of shared directory: ***
[2025-06-03 14:21:36] total 382692
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas 214370279 Jun  3 12:39 ATLAS.root_0
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:39 start_atlas.sh
[2025-06-03 14:21:36] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:39 input.tar.gz
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas 176048592 Jun  3 14:20 HITS.pool.root.1
[2025-06-03 14:21:36] -rw-------. 1 boincer umatlas    921600 Jun  3 14:21 result.tar.gz
14:21:38 (2151755): run_atlas exited; CPU time 42063.047596
14:21:38 (2151755): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN