Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:28 (2561850): wrapper (7.7.26015): starting
06:43:28 (2561850): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 06:43:28] Arguments: --nthreads 4
[2025-06-05 06:43:28] Threads: 4
[2025-06-05 06:43:28] Checking for CVMFS
[2025-06-05 06:43:28] No cvmfs_config command found, will try listing directly
[2025-06-05 06:43:28] CVMFS is ok
[2025-06-05 06:43:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:43:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:43:28] Further information can be found at the LHC@home message board.
[2025-06-05 06:43:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:43:28] Checking for apptainer binary...
[2025-06-05 06:43:28] which: no apptainer in ((null))
[2025-06-05 06:43:28] apptainer is not installed, using version from CVMFS
[2025-06-05 06:43:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:43:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 06:43:28] apptainer works
[2025-06-05 06:43:28] Set ATHENA_PROC_NUMBER=4
[2025-06-05 06:43:28] Set ATHENA_CORE_NUMBER=4
[2025-06-05 06:43:28] Starting ATLAS job with PandaID=6677618619
[2025-06-05 06:43:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:06:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:06:59] 2025-06-05 07:06:33,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:06:59] 2025-06-05 07:06:36,308 | INFO     | monitor loop #593: job 0:6677618619 is in state 'finished'
[2025-06-05 09:06:59] 2025-06-05 07:06:36,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,682 | INFO     | PID=2569654 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 09:06:59] 2025-06-05 07:06:37,682 | INFO     | .. there are 13 such processes running
[2025-06-05 09:06:59] 2025-06-05 07:06:37,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:06:59] 2025-06-05 07:06:37,915 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6677618619/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,916 | INFO     | extracted standard info from prmon json
[2025-06-05 09:06:59] 2025-06-05 07:06:37,916 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:06:59] 2025-06-05 07:06:37,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:06:59] 2025-06-05 07:06:37,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:06:59] 2025-06-05 07:06:37,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:06:59] 2025-06-05 07:06:37,919 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:06:59] 2025-06-05 07:06:37,920 | INFO     | sum of square deviations: 850825255.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | sum of deviations: 16555146849.999996
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | mean x: 1749102897.5
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | mean y: 2298140.3285714285
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | -- intersect: -34031312349.84545
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | intersect: -34031312349.84545
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | chi2: 1.6250311949250098
[2025-06-05 09:06:59] 2025-06-05 07:06:37,921 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,922 | INFO     | sum of deviations: 15911366148.000004
[2025-06-05 09:06:59] 2025-06-05 07:06:37,922 | INFO     | mean x: 1749102745.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,922 | INFO     | mean y: 2297023.4
[2025-06-05 09:06:59] 2025-06-05 07:06:37,922 | INFO     | -- intersect: -36478716196.44395
[2025-06-05 09:06:59] 2025-06-05 07:06:37,922 | INFO     | intersect: -36478716196.44395
[2025-06-05 09:06:59] 2025-06-05 07:06:37,923 | INFO     | chi2: 1.6273699403724196
[2025-06-05 09:06:59] 2025-06-05 07:06:37,923 | INFO     | current chi2=1.6273699403724196 (change=-0.14392003394849767 %)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,923 | INFO     | right removable region: 134
[2025-06-05 09:06:59] 2025-06-05 07:06:37,923 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | sum of deviations: -4862597126.999999
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | mean x: 1749103050.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | mean y: 2334715.688888889
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | -- intersect: 11151126048.606134
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | intersect: 11151126048.606134
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | chi2: 0.01650323982334493
[2025-06-05 09:06:59] 2025-06-05 07:06:37,924 | INFO     | current chi2=0.01650323982334493 (change=98.98443550653768 %)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,925 | INFO     | sum of square deviations: 681212772.5
[2025-06-05 09:06:59] 2025-06-05 07:06:37,925 | INFO     | sum of deviations: -4419999000.0
[2025-06-05 09:06:59] 2025-06-05 07:06:37,925 | INFO     | mean x: 1749103202.5
[2025-06-05 09:06:59] 2025-06-05 07:06:37,925 | INFO     | mean y: 2333873.8615384614
[2025-06-05 09:06:59] 2025-06-05 07:06:37,925 | INFO     | -- intersect: 11351261430.775185
[2025-06-05 09:06:59] 2025-06-05 07:06:37,926 | INFO     | intersect: 11351261430.775185
[2025-06-05 09:06:59] 2025-06-05 07:06:37,926 | INFO     | chi2: 0.016148662018547838
[2025-06-05 09:06:59] 2025-06-05 07:06:37,926 | INFO     | current chi2=0.016148662018547838 (change=2.148534521661122 %)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,926 | INFO     | left removable region: 20
[2025-06-05 09:06:59] 2025-06-05 07:06:37,926 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | sum of deviations: -1789965639.0000005
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | mean x: 1749103324.5
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | mean y: 2328311.7719298247
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | -- intersect: 6817873478.845526
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | intersect: 6817873478.845526
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | chi2: 0.011158783754968015
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | -- intersect: 6817873478.845526
[2025-06-05 09:06:59] 2025-06-05 07:06:37,927 | INFO     | current memory leak: -3.90 B/s (using 114 data points, chi2=0.01)
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | ..............................
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . Timing measurements:
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . get job = 0 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . initial setup = 1 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . payload setup = 10 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . stage-in = 0 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . payload execution = 8535 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . stage-out = 0 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,928 | INFO     | . log creation = 0 s
[2025-06-05 09:06:59] 2025-06-05 07:06:37,929 | INFO     | ..............................
[2025-06-05 09:06:59] 2025-06-05 07:06:38,021 | INFO     | 
[2025-06-05 09:06:59] 2025-06-05 07:06:38,022 | INFO     | job summary report
[2025-06-05 09:06:59] 2025-06-05 07:06:38,022 | INFO     | --------------------------------------------------
[2025-06-05 09:06:59] 2025-06-05 07:06:38,022 | INFO     | PanDA job id: 6677618619
[2025-06-05 09:06:59] 2025-06-05 07:06:38,022 | INFO     | task id: 45006595
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | errors: (none)
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | pilot state: finished 
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | transexitcode: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | exeerrorcode: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | exeerrordiag: 
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | exitcode: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | exitmsg: OK
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | cpuconsumptiontime: 32514 s
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | nevents: 400
[2025-06-05 09:06:59] 2025-06-05 07:06:38,023 | INFO     | neventsw: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | pid: 2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | pgrp: 2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | corecount: 4
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | event service: False
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | sizes: {0: 2396514, 1: 2397382, 8: 2397588, 12: 2397616, 8550: 2425771, 8551: 2434736, 8552: 2434920, 8558: 2435090}
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | --------------------------------------------------
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | 
[2025-06-05 09:06:59] 2025-06-05 07:06:38,024 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-05 09:06:59] 2025-06-05 07:06:38,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:06:59] 2025-06-05 07:06:38,057 | INFO     | job 6677618619 has completed (purged errors)
[2025-06-05 09:06:59] 2025-06-05 07:06:38,058 | INFO     | overall cleanup function is called
[2025-06-05 09:06:59] 2025-06-05 07:06:38,683 | INFO     | 8578s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 09:06:59] 2025-06-05 07:06:39,067 | INFO     | --- collectZombieJob: --- 10, [2585701]
[2025-06-05 09:06:59] 2025-06-05 07:06:39,067 | INFO     | zombie collector waiting for pid 2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:39,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:06:59] 2025-06-05 07:06:39,067 | INFO     | collected zombie processes
[2025-06-05 09:06:59] 2025-06-05 07:06:39,067 | INFO     | will attempt to kill all subprocesses of pid=2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:39,760 | INFO     | process IDs to be killed: [2585701] (in reverse order)
[2025-06-05 09:06:59] 2025-06-05 07:06:39,998 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:06:59] 2025-06-05 07:06:39,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:06:59] 2025-06-05 07:06:40,026 | INFO     | did not find any defunct processes belonging to 2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:40,050 | INFO     | did not find any defunct processes belonging to 2585701
[2025-06-05 09:06:59] 2025-06-05 07:06:40,050 | INFO     | ready for new job
[2025-06-05 09:06:59] 2025-06-05 07:06:40,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:06:59] 2025-06-05 07:06:40,053 | INFO     | **************************************
[2025-06-05 09:06:59] 2025-06-05 07:06:40,053 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:06:59] 2025-06-05 07:06:40,053 | INFO     | **************************************
[2025-06-05 09:06:59] 2025-06-05 07:06:40,053 | INFO     | 
[2025-06-05 09:06:59] 2025-06-05 07:06:40,061 | INFO     | architecture information:
[2025-06-05 09:06:59] 2025-06-05 07:06:40,062 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:06:59] 2025-06-05 07:06:40,083 | INFO     | cat /etc/os-release:
[2025-06-05 09:06:59] NAME="CentOS Linux"
[2025-06-05 09:06:59] VERSION="7 (Core)"
[2025-06-05 09:06:59] ID="centos"
[2025-06-05 09:06:59] ID_LIKE="rhel fedora"
[2025-06-05 09:06:59] VERSION_ID="7"
[2025-06-05 09:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:06:59] ANSI_COLOR="0;31"
[2025-06-05 09:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:06:59] HOME_URL="https://www.centos.org/"
[2025-06-05 09:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:06:59] 
[2025-06-05 09:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:06:59] 
[2025-06-05 09:06:59] 2025-06-05 07:06:40,083 | INFO     | **************************************
[2025-06-05 09:06:59] 2025-06-05 07:06:40,587 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-05 09:06:59] 2025-06-05 07:06:40,611 | INFO     | sufficient remaining disk space (3273839869952 B)
[2025-06-05 09:06:59] 2025-06-05 07:06:40,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:06:59] 2025-06-05 07:06:40,612 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:06:59] 2025-06-05 07:06:40,612 | INFO     | update_server=False
[2025-06-05 09:06:59] 2025-06-05 07:06:40,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:06:59] 2025-06-05 07:06:40,612 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:06:59] 2025-06-05 07:06:40,613 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:06:59] 2025-06-05 07:06:40,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:06:59] 2025-06-05 07:06:40,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:06:59] 2025-06-05 07:06:40,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:06:59] 2025-06-05 07:06:40,614 | INFO     | aborting loop
[2025-06-05 09:06:59] 2025-06-05 07:06:41,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:06:59] 2025-06-05 07:06:41,304 | INFO     | all data control threads have been joined
[2025-06-05 09:06:59] 2025-06-05 07:06:41,312 | INFO     | all job control threads have been joined
[2025-06-05 09:06:59] 2025-06-05 07:06:41,618 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:41,619 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:41,624 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:41,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:41,651 | INFO     | [job] validate thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:41,909 | INFO     | all payload control threads have been joined
[2025-06-05 09:06:59] 2025-06-05 07:06:42,077 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:06:59] 2025-06-05 07:06:42,309 | INFO     | [data] control thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,318 | INFO     | [job] control thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,540 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,578 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,785 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:42,914 | INFO     | [payload] control thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:43,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:06:59] 2025-06-05 07:06:43,276 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:44,033 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:46,186 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:51,097 | INFO     | job.realtimelogging is not enabled
[2025-06-05 09:06:59] 2025-06-05 07:06:52,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:06:59] 2025-06-05 07:06:53,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23433169860416)>', '<ExcThread(monitor, started 23432863397632)>']
[2025-06-05 09:06:59] 2025-06-05 07:06:54,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:06:59] 2025-06-05 07:06:54,685 | INFO     | [monitor] control thread has ended
[2025-06-05 09:06:59] 2025-06-05 07:06:58,839 | INFO     | all workflow threads have been joined
[2025-06-05 09:06:59] 2025-06-05 07:06:58,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:06:59] 2025-06-05 07:06:58,839 | INFO     | traces error code: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:58,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:06:59] 2025-06-05 07:06:58,999 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:06:59] 2025-06-05 07:06:59,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:06:59] 2025-06-05 07:06:59,007 [wrapper] pilotpid: 2569654
[2025-06-05 09:06:59] 2025-06-05 07:06:59,011 [wrapper] Pilot exit status: 0
[2025-06-05 09:06:59] 2025-06-05 07:06:59,026 [wrapper] pandaids: 6677618619
[2025-06-05 09:06:59] 2025-06-05 07:06:59,184 [wrapper] cleanup supervisor_pilot 3035838 2569655
[2025-06-05 09:06:59] 2025-06-05 07:06:59,188 [wrapper] Test setup, not cleaning
[2025-06-05 09:06:59] 2025-06-05 07:06:59,192 [wrapper] apfmon messages muted
[2025-06-05 09:06:59] 2025-06-05 07:06:59,195 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:06:59] 2025-06-05 07:06:59,199 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:06:59]  *** Error codes and diagnostics ***
[2025-06-05 09:06:59]     "exeErrorCode": 0,
[2025-06-05 09:06:59]     "exeErrorDiag": "",
[2025-06-05 09:06:59]     "pilotErrorCode": 0,
[2025-06-05 09:06:59]     "pilotErrorDiag": "",
[2025-06-05 09:06:59]  *** Listing of results directory ***
[2025-06-05 09:06:59] total 396820
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:24 queuedata.json
[2025-06-05 09:06:59] -rwx------ 1 boinc boinc     37140 Jun  3 14:24 runpilot2-wrapper.sh
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc       100 Jun  5 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:06:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:43 run_atlas
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc       105 Jun  5 06:43 job.xml
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc      6687 Jun  5 06:43 init_data.xml
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc 216845540 Jun  5 06:43 EVNT.45006593._001301.pool.root.1
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:43 start_atlas.sh
[2025-06-05 09:06:59] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:43 shared
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc    508882 Jun  5 06:43 input.tar.gz
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc         0 Jun  5 06:43 boinc_lockfile
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc      2525 Jun  5 06:43 pandaJob.out
[2025-06-05 09:06:59] -rw------- 1 boinc boinc    987109 Jun  5 06:43 agis_schedconf.cvmfs.json
[2025-06-05 09:06:59] -rw------- 1 boinc boinc   1598969 Jun  5 06:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:06:59] drwx------ 4 boinc boinc      4096 Jun  5 06:43 pilot3
[2025-06-05 09:06:59] -rw------- 1 boinc boinc 183490292 Jun  5 09:05 HITS.45006595._032334.pool.root.1
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc       529 Jun  5 09:06 boinc_task_state.xml
[2025-06-05 09:06:59] -rw------- 1 boinc boinc        95 Jun  5 09:06 pilot_heartbeat.json
[2025-06-05 09:06:59] -rw------- 1 boinc boinc      1027 Jun  5 09:06 memory_monitor_summary.json
[2025-06-05 09:06:59] -rw------- 1 boinc boinc    285926 Jun  5 09:06 log.45006595._032334.job.log.tgz.1
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc      8192 Jun  5 09:06 boinc_mmap_file
[2025-06-05 09:06:59] -rw------- 1 boinc boinc      7697 Jun  5 09:06 heartbeat.json
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc        27 Jun  5 09:06 wrapper_checkpoint.txt
[2025-06-05 09:06:59] -rw------- 1 boinc boinc      4560 Jun  5 09:06 pilotlog.txt
[2025-06-05 09:06:59] -rw------- 1 boinc boinc    803521 Jun  5 09:06 log.45006595._032334.job.log.1
[2025-06-05 09:06:59] -rw------- 1 boinc boinc       357 Jun  5 09:06 output.list
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc       620 Jun  5 09:06 runtime_log
[2025-06-05 09:06:59] -rw------- 1 boinc boinc   1105920 Jun  5 09:06 result.tar.gz
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc      9040 Jun  5 09:06 runtime_log.err
[2025-06-05 09:06:59] -rw------- 1 boinc boinc       662 Jun  5 09:06 phJLDmWsfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA3jKDmXKd3Mn.diag
[2025-06-05 09:06:59] -rw-r--r-- 1 boinc boinc     20958 Jun  5 09:06 stderr.txt
[2025-06-05 09:06:59] HITS file was successfully produced:
[2025-06-05 09:06:59] -rw------- 1 boinc boinc 183490292 Jun  5 09:05 shared/HITS.pool.root.1
[2025-06-05 09:06:59]  *** Contents of shared directory: ***
[2025-06-05 09:06:59] total 392560
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc 216845540 Jun  5 06:43 ATLAS.root_0
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:43 start_atlas.sh
[2025-06-05 09:06:59] -rw-r--r-- 2 boinc boinc    508882 Jun  5 06:43 input.tar.gz
[2025-06-05 09:06:59] -rw------- 1 boinc boinc 183490292 Jun  5 09:05 HITS.pool.root.1
[2025-06-05 09:06:59] -rw------- 1 boinc boinc   1105920 Jun  5 09:06 result.tar.gz
09:07:00 (2561850): run_atlas exited; CPU time 33028.154071
09:07:00 (2561850): called boinc_finish(0)

</stderr_txt>
]]>

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