Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:42:48 (19288): wrapper (7.7.26015): starting
02:42:48 (19288): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:42:48] Arguments: --nthreads 8
[2025-06-04 02:42:48] Threads: 8
[2025-06-04 02:42:48] Checking for CVMFS
[2025-06-04 02:42:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:42:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:42:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:42:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:42:50] 2.11.2.0 6418 32515 94184 146762 2 59 22524360 25165824 4660 130560 0 16915885 99.740 20466160 2177 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:42:50] CVMFS is ok
[2025-06-04 02:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:42:50] Checking for apptainer binary...
[2025-06-04 02:42:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:42:50] Running /usr/bin/apptainer --version
[2025-06-04 02:42:50] apptainer version 1.3.2-1.el7
[2025-06-04 02:42:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:42:53] cg-vwn357.simple-grid.lan
[2025-06-04 02:42:53] apptainer works
[2025-06-04 02:42:53] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:42:53] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:42:53] Starting ATLAS job with PandaID=6677635728
[2025-06-04 02:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:48:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:48:59] 2025-06-04 04:33:04,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:48:59] 2025-06-04 04:33:04,249 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:48:59] 2025-06-04 04:33:04,249 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,251 | INFO     | sum of deviations: 22078820802.000004
[2025-06-04 06:48:59] 2025-06-04 04:33:04,251 | INFO     | mean x: 1749004967.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,252 | INFO     | mean y: 2476695.0093457946
[2025-06-04 06:48:59] 2025-06-04 04:33:04,252 | INFO     | -- intersect: -12704922022.718014
[2025-06-04 06:48:59] 2025-06-04 04:33:04,252 | INFO     | intersect: -12704922022.718014
[2025-06-04 06:48:59] 2025-06-04 04:33:04,252 | INFO     | chi2: 5.903091855845558
[2025-06-04 06:48:59] 2025-06-04 04:33:04,253 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,255 | INFO     | sum of deviations: 35946768934.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,255 | INFO     | mean x: 1749004815.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,255 | INFO     | mean y: 2486663.043062201
[2025-06-04 06:48:59] 2025-06-04 04:33:04,255 | INFO     | -- intersect: -22207255937.832783
[2025-06-04 06:48:59] 2025-06-04 04:33:04,255 | INFO     | intersect: -22207255937.832783
[2025-06-04 06:48:59] 2025-06-04 04:33:04,256 | INFO     | chi2: 5.1872488155160745
[2025-06-04 06:48:59] 2025-06-04 04:33:04,256 | INFO     | current chi2=5.1872488155160745 (change=12.126578034197744 %)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,256 | INFO     | right removable region: 208
[2025-06-04 06:48:59] 2025-06-04 04:33:04,257 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,258 | INFO     | sum of deviations: -49616720093.99999
[2025-06-04 06:48:59] 2025-06-04 04:33:04,259 | INFO     | mean x: 1749005120.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,259 | INFO     | mean y: 2529150.411483254
[2025-06-04 06:48:59] 2025-06-04 04:33:04,259 | INFO     | -- intersect: 30658268367.9871
[2025-06-04 06:48:59] 2025-06-04 04:33:04,259 | INFO     | intersect: 30658268367.9871
[2025-06-04 06:48:59] 2025-06-04 04:33:04,259 | INFO     | chi2: 1.4735559693750868
[2025-06-04 06:48:59] 2025-06-04 04:33:04,260 | INFO     | current chi2=1.4735559693750868 (change=75.03755649819522 %)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,260 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,262 | INFO     | sum of deviations: -67084739477.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,262 | INFO     | mean x: 1749005272.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,262 | INFO     | mean y: 2542444.093137255
[2025-06-04 06:48:59] 2025-06-04 04:33:04,262 | INFO     | -- intersect: 44573951706.60582
[2025-06-04 06:48:59] 2025-06-04 04:33:04,262 | INFO     | intersect: 44573951706.60582
[2025-06-04 06:48:59] 2025-06-04 04:33:04,263 | INFO     | chi2: 0.9981229503430067
[2025-06-04 06:48:59] 2025-06-04 04:33:04,263 | INFO     | current chi2=0.9981229503430067 (change=32.264333959008304 %)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,263 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,265 | INFO     | sum of deviations: -61840453912.99999
[2025-06-04 06:48:59] 2025-06-04 04:33:04,265 | INFO     | mean x: 1749005425.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,265 | INFO     | mean y: 2538202.391959799
[2025-06-04 06:48:59] 2025-06-04 04:33:04,265 | INFO     | -- intersect: 44265160418.347206
[2025-06-04 06:48:59] 2025-06-04 04:33:04,265 | INFO     | intersect: 44265160418.347206
[2025-06-04 06:48:59] 2025-06-04 04:33:04,266 | INFO     | chi2: 0.9972498228672426
[2025-06-04 06:48:59] 2025-06-04 04:33:04,266 | INFO     | current chi2=0.9972498228672426 (change=0.08747694614816909 %)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,266 | INFO     | left removable region: 30
[2025-06-04 06:48:59] 2025-06-04 04:33:04,266 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,268 | INFO     | sum of deviations: -28472458942.0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,268 | INFO     | mean x: 1749005699.5
[2025-06-04 06:48:59] 2025-06-04 04:33:04,268 | INFO     | mean y: 2533281.382022472
[2025-06-04 06:48:59] 2025-06-04 04:33:04,268 | INFO     | -- intersect: 28479352386.287373
[2025-06-04 06:48:59] 2025-06-04 04:33:04,268 | INFO     | intersect: 28479352386.287373
[2025-06-04 06:48:59] 2025-06-04 04:33:04,269 | INFO     | chi2: 0.17661830812874668
[2025-06-04 06:48:59] 2025-06-04 04:33:04,269 | INFO     | -- intersect: 28479352386.287373
[2025-06-04 06:48:59] 2025-06-04 04:33:04,269 | INFO     | current memory leak: -16.28 B/s (using 178 data points, chi2=0.18)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,270 | INFO     | ..............................
[2025-06-04 06:48:59] 2025-06-04 04:33:04,270 | INFO     | . Timing measurements:
[2025-06-04 06:48:59] 2025-06-04 04:33:04,270 | INFO     | . get job = 0 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,270 | INFO     | . initial setup = 7 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,270 | INFO     | . payload setup = 150 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,271 | INFO     | . stage-in = 0 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,271 | INFO     | . payload execution = 13173 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,271 | INFO     | . stage-out = 5 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,271 | INFO     | . log creation = 1 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,271 | INFO     | ..............................
[2025-06-04 06:48:59] 2025-06-04 04:33:04,935 | INFO     | 
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | job summary report
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | --------------------------------------------------
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | PanDA job id: 6677635728
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | task id: 45006595
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | errors: (none)
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | pilot state: finished 
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | transexitcode: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | exeerrorcode: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,936 | INFO     | exeerrordiag: 
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | exitcode: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | exitmsg: OK
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | cpuconsumptiontime: 48687 s
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | nevents: 400
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | neventsw: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | pid: 6620
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | pgrp: 6620
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | corecount: 8
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | event service: False
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 23: 2405241, 34: 2405269, 44: 2405297, 55: 2405453, 66: 2405481, 77: 2405509, 87: 2405565, 89: 2405799, 98: 2406107, 1
[2025-06-04 06:48:59] 2025-06-04 04:33:04,937 | INFO     | --------------------------------------------------
[2025-06-04 06:48:59] 2025-06-04 04:33:04,938 | INFO     | 
[2025-06-04 06:48:59] 2025-06-04 04:33:04,938 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-04 06:48:59] 2025-06-04 04:33:05,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:48:59] 2025-06-04 04:33:05,222 | INFO     | job 6677635728 has completed (purged errors)
[2025-06-04 06:48:59] 2025-06-04 04:33:05,222 | INFO     | overall cleanup function is called
[2025-06-04 06:48:59] 2025-06-04 04:33:06,230 | INFO     | --- collectZombieJob: --- 10, [6620]
[2025-06-04 06:48:59] 2025-06-04 04:33:06,231 | INFO     | zombie collector waiting for pid 6620
[2025-06-04 06:48:59] 2025-06-04 04:33:06,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:48:59] 2025-06-04 04:33:06,231 | INFO     | collected zombie processes
[2025-06-04 06:48:59] 2025-06-04 04:33:06,231 | INFO     | will attempt to kill all subprocesses of pid=6620
[2025-06-04 06:48:59] 2025-06-04 04:33:06,342 | INFO     | process IDs to be killed: [6620] (in reverse order)
[2025-06-04 06:48:59] 2025-06-04 04:33:07,170 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:48:59] 2025-06-04 04:33:07,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:48:59] 2025-06-04 04:33:07,174 | INFO     | did not find any defunct processes belonging to 6620
[2025-06-04 06:48:59] 2025-06-04 04:33:07,180 | INFO     | did not find any defunct processes belonging to 6620
[2025-06-04 06:48:59] 2025-06-04 04:33:07,180 | INFO     | ready for new job
[2025-06-04 06:48:59] 2025-06-04 04:33:07,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:48:59] 2025-06-04 04:33:07,182 | INFO     | **************************************
[2025-06-04 06:48:59] 2025-06-04 04:33:07,182 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:48:59] 2025-06-04 04:33:07,182 | INFO     | **************************************
[2025-06-04 06:48:59] 2025-06-04 04:33:07,182 | INFO     | 
[2025-06-04 06:48:59] 2025-06-04 04:33:07,183 | INFO     | pilot is running in a VM
[2025-06-04 06:48:59] 2025-06-04 04:33:07,183 | INFO     | architecture information:
[2025-06-04 06:48:59] 2025-06-04 04:33:07,195 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:48:59] 2025-06-04 04:33:07,452 | INFO     | cat /etc/os-release:
[2025-06-04 06:48:59] NAME="CentOS Linux"
[2025-06-04 06:48:59] VERSION="7 (Core)"
[2025-06-04 06:48:59] ID="centos"
[2025-06-04 06:48:59] ID_LIKE="rhel fedora"
[2025-06-04 06:48:59] VERSION_ID="7"
[2025-06-04 06:48:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:48:59] ANSI_COLOR="0;31"
[2025-06-04 06:48:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:48:59] HOME_URL="https://www.centos.org/"
[2025-06-04 06:48:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:48:59] 
[2025-06-04 06:48:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:48:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:48:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:48:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:48:59] 
[2025-06-04 06:48:59] 2025-06-04 04:33:07,452 | INFO     | **************************************
[2025-06-04 06:48:59] 2025-06-04 04:33:07,936 | INFO     | PID=25273 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:48:59] 2025-06-04 04:33:07,936 | INFO     | .. there are 9 such processes running
[2025-06-04 06:48:59] 2025-06-04 04:33:07,956 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-04 06:48:59] 2025-06-04 04:33:08,094 | INFO     | sufficient remaining disk space (496511221760 B)
[2025-06-04 06:48:59] 2025-06-04 04:33:08,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:48:59] 2025-06-04 04:33:08,095 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:48:59] 2025-06-04 04:33:08,095 | INFO     | update_server=False
[2025-06-04 06:48:59] 2025-06-04 04:33:08,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:48:59] 2025-06-04 04:33:08,096 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:48:59] 2025-06-04 04:33:08,097 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:48:59] 2025-06-04 04:33:08,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:48:59] 2025-06-04 04:33:08,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:48:59] 2025-06-04 04:33:08,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:48:59] 2025-06-04 04:33:08,345 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:48:59] 2025-06-04 04:33:08,346 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:48:59] 2025-06-04 04:33:08,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:59] 2025-06-04 04:33:08,346 | INFO     | will abort loop
[2025-06-04 06:48:59] 2025-06-04 04:33:08,651 | INFO     | all data control threads have been joined
[2025-06-04 06:48:59] 2025-06-04 04:33:08,944 | INFO     | all payload control threads have been joined
[2025-06-04 06:48:59] 2025-06-04 04:33:09,101 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:48:59] 2025-06-04 04:33:09,189 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,194 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,313 | INFO     | [job] validate thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,352 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:59] 2025-06-04 04:33:09,554 | INFO     | all job control threads have been joined
[2025-06-04 06:48:59] 2025-06-04 04:33:09,658 | INFO     | [data] control thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:09,951 | INFO     | [payload] control thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,036 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,108 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,445 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,456 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,532 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,535 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:10,560 | INFO     | [job] control thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:13,171 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:48:59] 2025-06-04 04:33:13,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810144466752)>', '<ExcThread(monitor, started 139809028826880)>']
[2025-06-04 06:48:59] 2025-06-04 04:33:14,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:48:59] 2025-06-04 04:33:14,134 | INFO     | [monitor] control thread has ended
[2025-06-04 06:48:59] 2025-06-04 04:33:18,808 | INFO     | all workflow threads have been joined
[2025-06-04 06:48:59] 2025-06-04 04:33:18,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:48:59] 2025-06-04 04:33:18,809 | INFO     | traces error code: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:18,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:48:59] 2025-06-04 04:33:19,251 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:48:59] 2025-06-04 04:33:19,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:48:59] 2025-06-04 04:33:19,432 [wrapper] pilotpid: 25273
[2025-06-04 06:48:59] 2025-06-04 04:33:19,534 [wrapper] Pilot exit status: 0
[2025-06-04 06:48:59] 2025-06-04 04:33:20,044 [wrapper] pandaids: 6677635728
[2025-06-04 06:48:59] 2025-06-04 04:33:21,080 [wrapper] cleanup supervisor_pilot 30524 25274
[2025-06-04 06:48:59] 2025-06-04 04:33:21,143 [wrapper] Test setup, not cleaning
[2025-06-04 06:48:59] 2025-06-04 04:33:21,272 [wrapper] apfmon messages muted
[2025-06-04 06:48:59] 2025-06-04 04:33:21,358 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:48:59] 2025-06-04 04:33:21,448 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:48:59]  *** Error codes and diagnostics ***
[2025-06-04 06:48:59]     "exeErrorCode": 0,
[2025-06-04 06:48:59]     "exeErrorDiag": "",
[2025-06-04 06:48:59]     "pilotErrorCode": 0,
[2025-06-04 06:48:59]     "pilotErrorDiag": "",
[2025-06-04 06:48:59]  *** Listing of results directory ***
[2025-06-04 06:48:59] total 387232
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:39 queuedata.json
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-04 06:48:59] -rwx------. 1 boinc boinc     37140 Jun  3 15:41 runpilot2-wrapper.sh
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:48:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:42 run_atlas
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:42 job.xml
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc      6393 Jun  4 02:42 init_data.xml
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc 212914287 Jun  4 02:42 EVNT.45006593._001377.pool.root.1
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:42 start_atlas.sh
[2025-06-04 06:48:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:42 shared
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc    508887 Jun  4 02:42 input.tar.gz
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:42 boinc_lockfile
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:42 pandaJob.out
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc    986069 Jun  4 02:46 agis_schedconf.cvmfs.json
[2025-06-04 06:48:59] drwx------. 4 boinc boinc      4096 Jun  4 02:46 pilot3
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc 176710826 Jun  4 06:30 HITS.45006595._034232.pool.root.1
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:30 boinc_task_state.xml
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc      1017 Jun  4 06:31 memory_monitor_summary.json
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc   1603667 Jun  4 06:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc    369197 Jun  4 06:31 log.45006595._034232.job.log.tgz.1
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc        95 Jun  4 06:32 pilot_heartbeat.json
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc      7694 Jun  4 06:33 heartbeat.json
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc      5118 Jun  4 06:33 pilotlog.txt
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc   1166782 Jun  4 06:33 log.45006595._034232.job.log.1
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc       357 Jun  4 06:33 output.list
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:33 runtime_log
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc   1556480 Jun  4 06:33 result.tar.gz
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc       656 Jun  4 06:33 ZYfMDmA4gg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCOkKDmHPwAsn.diag
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc      8673 Jun  4 06:33 runtime_log.err
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:48 boinc_mmap_file
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:48 wrapper_checkpoint.txt
[2025-06-04 06:48:59] -rw-r--r--. 1 boinc boinc     20650 Jun  4 06:48 stderr.txt
[2025-06-04 06:48:59] HITS file was successfully produced:
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc 176710826 Jun  4 06:30 shared/HITS.pool.root.1
[2025-06-04 06:48:59]  *** Contents of shared directory: ***
[2025-06-04 06:48:59] total 382536
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc 212914287 Jun  4 02:42 ATLAS.root_0
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:42 start_atlas.sh
[2025-06-04 06:48:59] -rw-r--r--. 2 boinc boinc    508887 Jun  4 02:42 input.tar.gz
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc 176710826 Jun  4 06:30 HITS.pool.root.1
[2025-06-04 06:48:59] -rw-------. 1 boinc boinc   1556480 Jun  4 06:33 result.tar.gz
06:49:01 (19288): run_atlas exited; CPU time 48877.993745
06:49:01 (19288): called boinc_finish(0)

</stderr_txt>
]]>

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