Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:28 (1581422): wrapper (7.7.26015): starting
12:27:28 (1581422): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:27:28] Arguments: --nthreads 8
[2025-06-03 12:27:28] Threads: 8
[2025-06-03 12:27:28] Checking for CVMFS
[2025-06-03 12:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:27:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:27:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:27:28] 2.12.6.0 3581464 138321 231160 146749 2 60 25900510 32935936 3664 130560 0 357389390 99.603 381352950 28100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:27:28] CVMFS is ok
[2025-06-03 12:27:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:27:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:27:28] Further information can be found at the LHC@home message board.
[2025-06-03 12:27:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:27:28] Checking for apptainer binary...
[2025-06-03 12:27:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:27:28] Running /usr/bin/apptainer --version
[2025-06-03 12:27:28] apptainer version 1.4.1-1.el9
[2025-06-03 12:27:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:27:28] c-6-6.aglt2.org
[2025-06-03 12:27:28] apptainer works
[2025-06-03 12:27:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:27:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:27:28] Starting ATLAS job with PandaID=6677636349
[2025-06-03 12:27:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:58:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:58:57]  is_altstaged=None
[2025-06-03 13:58:57]  is_tar=False
[2025-06-03 13:58:57]  lfn=log.45006595._034448.job.log.tgz.1
[2025-06-03 13:58:57]  mtime=0
[2025-06-03 13:58:57]  protocol_id=None
[2025-06-03 13:58:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:58:57]  replicas=None
[2025-06-03 13:58:57]  scope=mc23_13p6TeV
[2025-06-03 13:58:57]  status=None
[2025-06-03 13:58:57]  status_code=0
[2025-06-03 13:58:57]  storage_token=
[2025-06-03 13:58:57]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677636349/log.45006595._034448.job.log.tgz.1
[2025-06-03 13:58:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a6/log.45006595._034448.job.log.tgz.1
[2025-06-03 13:58:57]  workdir=None
[2025-06-03 13:58:57] ]
[2025-06-03 13:58:57] 2025-06-03 17:58:34,295 | INFO     | transferring file log.45006595._034448.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677636349/log.45006595._034448.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:58:57] 2025-06-03 17:58:34,296 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677636349/log.45006595._034448.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._034448.job
[2025-06-03 13:58:57] 2025-06-03 17:58:34,312 | INFO     | adding to output.list: log.45006595._034448.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a6/log.45006595._034448.job.log.tg
[2025-06-03 13:58:57] 2025-06-03 17:58:34,313 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:58:57] 2025-06-03 17:58:34,313 | INFO     | summary of transferred files:
[2025-06-03 13:58:57] 2025-06-03 17:58:34,314 | INFO     |  -- lfn=log.45006595._034448.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:58:57] 2025-06-03 17:58:34,314 | INFO     | stage-out finished correctly
[2025-06-03 13:58:57] 2025-06-03 17:58:34,962 | INFO     | monitor loop #402: job 0:6677636349 is in state 'finished'
[2025-06-03 13:58:57] 2025-06-03 17:58:34,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:58:57] 2025-06-03 17:58:36,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:58:57] 2025-06-03 17:58:37,466 | INFO     | monitor loop #403: job 0:6677636349 is in state 'finished'
[2025-06-03 13:58:57] 2025-06-03 17:58:37,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:58:57] 2025-06-03 17:58:38,865 | INFO     | job 6677636349 has state=finished
[2025-06-03 13:58:57] 2025-06-03 17:58:38,865 | INFO     | preparing for final server update for job 6677636349 in state='finished'
[2025-06-03 13:58:57] 2025-06-03 17:58:38,866 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:58:57] 2025-06-03 17:58:38,866 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:58:57] 2025-06-03 17:58:38,866 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:58:57] 2025-06-03 17:58:38,866 | INFO     | job 6677636349 has finished - writing final server update
[2025-06-03 13:58:57] 2025-06-03 17:58:38,866 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:58:57] 2025-06-03 17:58:38,880 | INFO     | executing command: lscpu
[2025-06-03 13:58:57] 2025-06-03 17:58:38,933 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:58:57] 2025-06-03 17:58:39,969 | INFO     | monitor loop #404: job 0:6677636349 is in state 'finished'
[2025-06-03 13:58:57] 2025-06-03 17:58:39,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:58:57] 2025-06-03 17:58:41,554 | INFO     | PID=1585025 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 13:58:57] 2025-06-03 17:58:41,554 | INFO     | .. there are 5 such processes running
[2025-06-03 13:58:57] 2025-06-03 17:58:42,104 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:58:57] 2025-06-03 17:58:42,104 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677636349/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:58:57] 2025-06-03 17:58:42,104 | INFO     | extracted standard info from prmon json
[2025-06-03 13:58:57] 2025-06-03 17:58:42,105 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:58:57] 2025-06-03 17:58:42,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:58:57] 2025-06-03 17:58:42,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:58:57] 2025-06-03 17:58:42,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:58:57] 2025-06-03 17:58:42,106 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:58:57] 2025-06-03 17:58:42,106 | INFO     | sum of square deviations: 170944600.5
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | sum of deviations: 4404261731.999998
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | mean x: 1748970857.5
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | mean y: 2200072.6829268294
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | -- intersect: -45058745962.1143
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | intersect: -45058745962.1143
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | chi2: 1.064669963777785
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | -- intersect: -45058745962.1143
[2025-06-03 13:58:57] 2025-06-03 17:58:42,107 | INFO     | current memory leak: 25.76 B/s (using 82 data points, chi2=1.06)
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | ..............................
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . Timing measurements:
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . get job = 0 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . initial setup = 2 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . payload setup = 6 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . stage-in = 0 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . payload execution = 5431 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . stage-out = 0 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | . log creation = 0 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,108 | INFO     | ..............................
[2025-06-03 13:58:57] 2025-06-03 17:58:42,163 | INFO     | 
[2025-06-03 13:58:57] 2025-06-03 17:58:42,163 | INFO     | job summary report
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | --------------------------------------------------
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | PanDA job id: 6677636349
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | task id: 45006595
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | errors: (none)
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | pilot state: finished 
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | transexitcode: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | exeerrorcode: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | exeerrordiag: 
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | exitcode: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | exitmsg: OK
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | cpuconsumptiontime: 37747 s
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | nevents: 400
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | neventsw: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | pid: 1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | pgrp: 1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:42,164 | INFO     | corecount: 8
[2025-06-03 13:58:57] 2025-06-03 17:58:42,165 | INFO     | event service: False
[2025-06-03 13:58:57] 2025-06-03 17:58:42,165 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5441: 2431878, 5442: 2440819, 5444: 2440875, 5450: 2441173}
[2025-06-03 13:58:57] 2025-06-03 17:58:42,165 | INFO     | --------------------------------------------------
[2025-06-03 13:58:57] 2025-06-03 17:58:42,165 | INFO     | 
[2025-06-03 13:58:57] 2025-06-03 17:58:42,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 13:58:57] 2025-06-03 17:58:42,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:58:57] 2025-06-03 17:58:42,182 | INFO     | job 6677636349 has completed (purged errors)
[2025-06-03 13:58:57] 2025-06-03 17:58:42,182 | INFO     | overall cleanup function is called
[2025-06-03 13:58:57] 2025-06-03 17:58:43,190 | INFO     | --- collectZombieJob: --- 10, [1591999]
[2025-06-03 13:58:57] 2025-06-03 17:58:43,190 | INFO     | zombie collector waiting for pid 1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:43,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:58:57] 2025-06-03 17:58:43,190 | INFO     | collected zombie processes
[2025-06-03 13:58:57] 2025-06-03 17:58:43,190 | INFO     | will attempt to kill all subprocesses of pid=1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:43,451 | INFO     | process IDs to be killed: [1591999] (in reverse order)
[2025-06-03 13:58:57] 2025-06-03 17:58:43,522 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:58:57] 2025-06-03 17:58:43,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:58:57] 2025-06-03 17:58:43,530 | INFO     | did not find any defunct processes belonging to 1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:43,538 | INFO     | did not find any defunct processes belonging to 1591999
[2025-06-03 13:58:57] 2025-06-03 17:58:43,539 | INFO     | ready for new job
[2025-06-03 13:58:57] 2025-06-03 17:58:43,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:58:57] 2025-06-03 17:58:43,542 | INFO     | **************************************
[2025-06-03 13:58:57] 2025-06-03 17:58:43,542 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:58:57] 2025-06-03 17:58:43,542 | INFO     | **************************************
[2025-06-03 13:58:57] 2025-06-03 17:58:43,542 | INFO     | 
[2025-06-03 13:58:57] 2025-06-03 17:58:43,557 | INFO     | architecture information:
[2025-06-03 13:58:57] 2025-06-03 17:58:43,557 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:58:57] 2025-06-03 17:58:43,570 | INFO     | cat /etc/os-release:
[2025-06-03 13:58:57] NAME="CentOS Linux"
[2025-06-03 13:58:57] VERSION="7 (Core)"
[2025-06-03 13:58:57] ID="centos"
[2025-06-03 13:58:57] ID_LIKE="rhel fedora"
[2025-06-03 13:58:57] VERSION_ID="7"
[2025-06-03 13:58:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:58:57] ANSI_COLOR="0;31"
[2025-06-03 13:58:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:58:57] HOME_URL="https://www.centos.org/"
[2025-06-03 13:58:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:58:57] 
[2025-06-03 13:58:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:58:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:58:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:58:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:58:57] 
[2025-06-03 13:58:57] 2025-06-03 17:58:43,570 | INFO     | **************************************
[2025-06-03 13:58:57] 2025-06-03 17:58:44,073 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 13:58:57] 2025-06-03 17:58:44,088 | INFO     | sufficient remaining disk space (74267492352 B)
[2025-06-03 13:58:57] 2025-06-03 17:58:44,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:58:57] 2025-06-03 17:58:44,089 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:58:57] 2025-06-03 17:58:44,089 | INFO     | update_server=False
[2025-06-03 13:58:57] 2025-06-03 17:58:44,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:58:57] 2025-06-03 17:58:44,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:58:57] 2025-06-03 17:58:44,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:58:57] 2025-06-03 17:58:44,090 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:58:57] 2025-06-03 17:58:44,091 | INFO     | aborting loop
[2025-06-03 13:58:57] 2025-06-03 17:58:44,091 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:58:57] 2025-06-03 17:58:44,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:58:57] 2025-06-03 17:58:44,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:58:57] 2025-06-03 17:58:44,216 | INFO     | all job control threads have been joined
[2025-06-03 13:58:57] 2025-06-03 17:58:44,335 | INFO     | all data control threads have been joined
[2025-06-03 13:58:57] 2025-06-03 17:58:44,894 | INFO     | all payload control threads have been joined
[2025-06-03 13:58:57] 2025-06-03 17:58:44,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:58:57] 2025-06-03 17:58:45,095 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,096 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,096 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,222 | INFO     | [job] control thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,340 | INFO     | [data] control thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,682 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,791 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,857 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:45,900 | INFO     | [payload] control thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:46,125 | INFO     | [job] validate thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:46,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:46,336 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:46,465 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:46,938 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:47,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:58:57] 2025-06-03 17:58:51,087 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:58:57] 2025-06-03 17:58:51,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455269611328)>', '<ExcThread(monitor, started 140454918072064)>']
[2025-06-03 13:58:57] 2025-06-03 17:58:52,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:58:57] 2025-06-03 17:58:52,129 | INFO     | [monitor] control thread has ended
[2025-06-03 13:58:57] 2025-06-03 17:58:56,887 | INFO     | all workflow threads have been joined
[2025-06-03 13:58:57] 2025-06-03 17:58:56,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:58:57] 2025-06-03 17:58:56,888 | INFO     | traces error code: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:56,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:58:57] 2025-06-03 17:58:57,001 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:58:57] 2025-06-03 17:58:57,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:58:57] 2025-06-03 17:58:57,005 [wrapper] pilotpid: 1585025
[2025-06-03 13:58:57] 2025-06-03 17:58:57,008 [wrapper] Pilot exit status: 0
[2025-06-03 13:58:57] 2025-06-03 17:58:57,016 [wrapper] pandaids: 6677636349
[2025-06-03 13:58:57] 2025-06-03 17:58:57,064 [wrapper] cleanup supervisor_pilot 1789685 1585026
[2025-06-03 13:58:57] 2025-06-03 17:58:57,066 [wrapper] Test setup, not cleaning
[2025-06-03 13:58:57] 2025-06-03 17:58:57,069 [wrapper] apfmon messages muted
[2025-06-03 13:58:57] 2025-06-03 17:58:57,071 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:58:57] 2025-06-03 17:58:57,073 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:58:57]  *** Error codes and diagnostics ***
[2025-06-03 13:58:57]     "exeErrorCode": 0,
[2025-06-03 13:58:57]     "exeErrorDiag": "",
[2025-06-03 13:58:57]     "pilotErrorCode": 0,
[2025-06-03 13:58:57]     "pilotErrorDiag": "",
[2025-06-03 13:58:57]  *** Listing of results directory ***
[2025-06-03 13:58:57] total 397660
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:44 queuedata.json
[2025-06-03 13:58:57] -rwx------. 1 boincer umatlas     37140 Jun  3 09:45 runpilot2-wrapper.sh
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:58:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:27 run_atlas
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:27 job.xml
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas 217955911 Jun  3 12:27 EVNT.45006593._001385.pool.root.1
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:27 start_atlas.sh
[2025-06-03 13:58:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:27 shared
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 12:27 input.tar.gz
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:27 boinc_lockfile
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:27 pandaJob.out
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas    983734 Jun  3 12:27 agis_schedconf.cvmfs.json
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:58:57] drwx------. 4 boincer umatlas      4096 Jun  3 12:27 pilot3
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas      6674 Jun  3 13:54 init_data.xml
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas 183706882 Jun  3 13:57 HITS.45006595._034448.pool.root.1
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:57 boinc_task_state.xml
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas        95 Jun  3 13:58 pilot_heartbeat.json
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas      1033 Jun  3 13:58 memory_monitor_summary.json
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas    323265 Jun  3 13:58 log.45006595._034448.job.log.tgz.1
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas      7708 Jun  3 13:58 heartbeat.json
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:58 boinc_mmap_file
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:58 wrapper_checkpoint.txt
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas      4476 Jun  3 13:58 pilotlog.txt
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas    529410 Jun  3 13:58 log.45006595._034448.job.log.1
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas       357 Jun  3 13:58 output.list
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:58 runtime_log
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas    870400 Jun  3 13:58 result.tar.gz
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 13:58 runtime_log.err
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas       648 Jun  3 13:58 g0jNDmF8gg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpPkKDmna1u9m.diag
[2025-06-03 13:58:57] -rw-r--r--. 1 boincer umatlas     21508 Jun  3 13:58 stderr.txt
[2025-06-03 13:58:57] HITS file was successfully produced:
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas 183706882 Jun  3 13:57 shared/HITS.pool.root.1
[2025-06-03 13:58:57]  *** Contents of shared directory: ***
[2025-06-03 13:58:57] total 393628
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas 217955911 Jun  3 12:27 ATLAS.root_0
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:27 start_atlas.sh
[2025-06-03 13:58:57] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 12:27 input.tar.gz
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas 183706882 Jun  3 13:57 HITS.pool.root.1
[2025-06-03 13:58:57] -rw-------. 1 boincer umatlas    870400 Jun  3 13:58 result.tar.gz
13:58:59 (1581422): run_atlas exited; CPU time 37889.569939
13:58:59 (1581422): called boinc_finish(0)

</stderr_txt>
]]>

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