Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:18 (27690): wrapper (7.7.26015): starting
03:04:18 (27690): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:04:18] Arguments: --nthreads 8
[2025-06-04 03:04:18] Threads: 8
[2025-06-04 03:04:18] Checking for CVMFS
[2025-06-04 03:04:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:04:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:04:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:04:21] 2.11.2.0 16344 32524 88916 146762 2 60 18016833 25165824 4287 130560 0 16749193 99.778 19839953 2094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:04:21] CVMFS is ok
[2025-06-04 03:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:04:21] Checking for apptainer binary...
[2025-06-04 03:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:04:21] Running /usr/bin/apptainer --version
[2025-06-04 03:04:21] apptainer version 1.3.2-1.el7
[2025-06-04 03:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:04:28] cg-vwn432.simple-grid.lan
[2025-06-04 03:04:28] apptainer works
[2025-06-04 03:04:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:04:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:04:28] Starting ATLAS job with PandaID=6677636435
[2025-06-04 03:04:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:10:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:10:30] 2025-06-04 04:54:19,768 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677636435/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,769 | INFO     | extracted standard info from prmon json
[2025-06-04 07:10:30] 2025-06-04 04:54:19,770 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:10:30] 2025-06-04 04:54:19,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:10:30] 2025-06-04 04:54:19,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:10:30] 2025-06-04 04:54:19,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:10:30] 2025-06-04 04:54:19,775 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:10:30] 2025-06-04 04:54:19,776 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,777 | INFO     | sum of deviations: 82501002785.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,777 | INFO     | mean x: 1749006253.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,778 | INFO     | mean y: 2412661.761682243
[2025-06-04 07:10:30] 2025-06-04 04:54:19,778 | INFO     | -- intersect: -47480825562.42369
[2025-06-04 07:10:30] 2025-06-04 04:54:19,778 | INFO     | intersect: -47480825562.42369
[2025-06-04 07:10:30] 2025-06-04 04:54:19,778 | INFO     | chi2: 7.958785845454153
[2025-06-04 07:10:30] 2025-06-04 04:54:19,779 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,780 | INFO     | sum of deviations: 94193729865.99998
[2025-06-04 07:10:30] 2025-06-04 04:54:19,780 | INFO     | mean x: 1749006101.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,780 | INFO     | mean y: 2421036.7703349283
[2025-06-04 07:10:30] 2025-06-04 04:54:19,781 | INFO     | -- intersect: -58195300071.09388
[2025-06-04 07:10:30] 2025-06-04 04:54:19,781 | INFO     | intersect: -58195300071.09388
[2025-06-04 07:10:30] 2025-06-04 04:54:19,781 | INFO     | chi2: 7.275427164934451
[2025-06-04 07:10:30] 2025-06-04 04:54:19,781 | INFO     | current chi2=7.275427164934451 (change=8.586217719503262 %)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,781 | INFO     | right removable region: 208
[2025-06-04 07:10:30] 2025-06-04 04:54:19,782 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,783 | INFO     | sum of deviations: 6893699791.999994
[2025-06-04 07:10:30] 2025-06-04 04:54:19,783 | INFO     | mean x: 1749006406.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,784 | INFO     | mean y: 2468049.8947368423
[2025-06-04 07:10:30] 2025-06-04 04:54:19,784 | INFO     | -- intersect: -4256814265.7078977
[2025-06-04 07:10:30] 2025-06-04 04:54:19,784 | INFO     | intersect: -4256814265.7078977
[2025-06-04 07:10:30] 2025-06-04 04:54:19,784 | INFO     | chi2: 2.6818727847801944
[2025-06-04 07:10:30] 2025-06-04 04:54:19,784 | INFO     | current chi2=2.6818727847801944 (change=66.30299097302627 %)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,785 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,786 | INFO     | sum of deviations: -34898385022.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | mean x: 1749006558.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | mean y: 2500023.75
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | -- intersect: 23189164490.991085
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | intersect: 23189164490.991085
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | chi2: 0.9764143391932528
[2025-06-04 07:10:30] 2025-06-04 04:54:19,787 | INFO     | current chi2=0.9764143391932528 (change=63.592071005960136 %)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,788 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,789 | INFO     | sum of deviations: -36193048991.99999
[2025-06-04 07:10:30] 2025-06-04 04:54:19,789 | INFO     | mean x: 1749006711.0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,789 | INFO     | mean y: 2501012.3467336684
[2025-06-04 07:10:30] 2025-06-04 04:54:19,790 | INFO     | -- intersect: 25907880596.724598
[2025-06-04 07:10:30] 2025-06-04 04:54:19,790 | INFO     | intersect: 25907880596.724598
[2025-06-04 07:10:30] 2025-06-04 04:54:19,790 | INFO     | chi2: 0.9461726195983069
[2025-06-04 07:10:30] 2025-06-04 04:54:19,790 | INFO     | current chi2=0.9461726195983069 (change=3.0972219867164874 %)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,790 | INFO     | left removable region: 30
[2025-06-04 07:10:30] 2025-06-04 04:54:19,791 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | sum of deviations: -2318361912.9999995
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | mean x: 1749006985.5
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | mean y: 2493013.438202247
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | -- intersect: 2321211656.363428
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | intersect: 2321211656.363428
[2025-06-04 07:10:30] 2025-06-04 04:54:19,792 | INFO     | chi2: 0.061867798387320004
[2025-06-04 07:10:30] 2025-06-04 04:54:19,793 | INFO     | -- intersect: 2321211656.363428
[2025-06-04 07:10:30] 2025-06-04 04:54:19,793 | INFO     | current memory leak: -1.33 B/s (using 178 data points, chi2=0.06)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | ..............................
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . Timing measurements:
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . get job = 0 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . initial setup = 7 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . payload setup = 149 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . stage-in = 0 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . payload execution = 13150 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . stage-out = 2 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | . log creation = 0 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,794 | INFO     | ..............................
[2025-06-04 07:10:30] 2025-06-04 04:54:19,942 | INFO     | 
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | job summary report
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | --------------------------------------------------
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | PanDA job id: 6677636435
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | task id: 45006595
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | errors: (none)
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | pilot state: finished 
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | transexitcode: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,943 | INFO     | exeerrorcode: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | exeerrordiag: 
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | exitcode: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | exitmsg: OK
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | cpuconsumptiontime: 48508 s
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | nevents: 400
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | neventsw: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | pid: 7179
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | pgrp: 7179
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | corecount: 8
[2025-06-04 07:10:30] 2025-06-04 04:54:19,944 | INFO     | event service: False
[2025-06-04 07:10:30] 2025-06-04 04:54:19,945 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 86: 2405826, 88: 2406134, 13
[2025-06-04 07:10:30] 2025-06-04 04:54:19,945 | INFO     | --------------------------------------------------
[2025-06-04 07:10:30] 2025-06-04 04:54:19,945 | INFO     | 
[2025-06-04 07:10:30] 2025-06-04 04:54:19,945 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 07:10:30] 2025-06-04 04:54:20,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:10:30] 2025-06-04 04:54:20,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:10:30] 2025-06-04 04:54:20,615 | INFO     | job 6677636435 has completed (purged errors)
[2025-06-04 07:10:30] 2025-06-04 04:54:20,615 | INFO     | overall cleanup function is called
[2025-06-04 07:10:30] 2025-06-04 04:54:21,623 | INFO     | --- collectZombieJob: --- 10, [7179]
[2025-06-04 07:10:30] 2025-06-04 04:54:21,624 | INFO     | zombie collector waiting for pid 7179
[2025-06-04 07:10:30] 2025-06-04 04:54:21,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:10:30] 2025-06-04 04:54:21,624 | INFO     | collected zombie processes
[2025-06-04 07:10:30] 2025-06-04 04:54:21,624 | INFO     | will attempt to kill all subprocesses of pid=7179
[2025-06-04 07:10:30] 2025-06-04 04:54:21,747 | INFO     | process IDs to be killed: [7179] (in reverse order)
[2025-06-04 07:10:30] 2025-06-04 04:54:22,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:10:30] 2025-06-04 04:54:22,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:10:30] 2025-06-04 04:54:22,375 | INFO     | did not find any defunct processes belonging to 7179
[2025-06-04 07:10:30] 2025-06-04 04:54:22,378 | INFO     | did not find any defunct processes belonging to 7179
[2025-06-04 07:10:30] 2025-06-04 04:54:22,379 | INFO     | ready for new job
[2025-06-04 07:10:30] 2025-06-04 04:54:22,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:10:30] 2025-06-04 04:54:22,381 | INFO     | **************************************
[2025-06-04 07:10:30] 2025-06-04 04:54:22,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:10:30] 2025-06-04 04:54:22,381 | INFO     | **************************************
[2025-06-04 07:10:30] 2025-06-04 04:54:22,381 | INFO     | 
[2025-06-04 07:10:30] 2025-06-04 04:54:22,382 | INFO     | pilot is running in a VM
[2025-06-04 07:10:30] 2025-06-04 04:54:22,382 | INFO     | architecture information:
[2025-06-04 07:10:30] 2025-06-04 04:54:22,394 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:10:30] 2025-06-04 04:54:22,578 | INFO     | cat /etc/os-release:
[2025-06-04 07:10:30] NAME="CentOS Linux"
[2025-06-04 07:10:30] VERSION="7 (Core)"
[2025-06-04 07:10:30] ID="centos"
[2025-06-04 07:10:30] ID_LIKE="rhel fedora"
[2025-06-04 07:10:30] VERSION_ID="7"
[2025-06-04 07:10:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:10:30] ANSI_COLOR="0;31"
[2025-06-04 07:10:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:10:30] HOME_URL="https://www.centos.org/"
[2025-06-04 07:10:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:10:30] 
[2025-06-04 07:10:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:10:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:10:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:10:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:10:30] 
[2025-06-04 07:10:30] 2025-06-04 04:54:22,578 | INFO     | **************************************
[2025-06-04 07:10:30] 2025-06-04 04:54:23,081 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 07:10:30] 2025-06-04 04:54:23,334 | INFO     | sufficient remaining disk space (496480813056 B)
[2025-06-04 07:10:30] 2025-06-04 04:54:23,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:10:30] 2025-06-04 04:54:23,335 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:10:30] 2025-06-04 04:54:23,335 | INFO     | update_server=False
[2025-06-04 07:10:30] 2025-06-04 04:54:23,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:10:30] 2025-06-04 04:54:23,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:10:30] 2025-06-04 04:54:23,336 | INFO     | aborting loop
[2025-06-04 07:10:30] 2025-06-04 04:54:23,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:10:30] 2025-06-04 04:54:23,436 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:10:30] 2025-06-04 04:54:23,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:10:30] 2025-06-04 04:54:23,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:10:30] 2025-06-04 04:54:23,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:10:30] 2025-06-04 04:54:23,872 | INFO     | all data control threads have been joined
[2025-06-04 07:10:30] 2025-06-04 04:54:23,982 | INFO     | all job control threads have been joined
[2025-06-04 07:10:30] 2025-06-04 04:54:24,342 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,345 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,383 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,782 | INFO     | all payload control threads have been joined
[2025-06-04 07:10:30] 2025-06-04 04:54:24,873 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,878 | INFO     | [data] control thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,927 | INFO     | [job] validate thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:24,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:10:30] 2025-06-04 04:54:24,988 | INFO     | [job] control thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,155 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,176 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,442 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,472 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,527 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,787 | INFO     | [payload] control thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:25,961 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:27,473 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:10:30] 2025-06-04 04:54:28,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424107620160)>', '<ExcThread(monitor, started 140423544694528)>']
[2025-06-04 07:10:30] 2025-06-04 04:54:28,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:10:30] 2025-06-04 04:54:28,466 | INFO     | [monitor] control thread has ended
[2025-06-04 07:10:30] 2025-06-04 04:54:33,165 | INFO     | all workflow threads have been joined
[2025-06-04 07:10:30] 2025-06-04 04:54:33,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:10:30] 2025-06-04 04:54:33,166 | INFO     | traces error code: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:33,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:10:30] 2025-06-04 04:54:33,531 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:10:30] 2025-06-04 04:54:33,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:10:30] 2025-06-04 04:54:33,738 [wrapper] pilotpid: 31426
[2025-06-04 07:10:30] 2025-06-04 04:54:33,769 [wrapper] Pilot exit status: 0
[2025-06-04 07:10:30] 2025-06-04 04:54:34,192 [wrapper] pandaids: 6677636435
[2025-06-04 07:10:30] 2025-06-04 04:54:35,327 [wrapper] cleanup supervisor_pilot 16429 31427
[2025-06-04 07:10:30] 2025-06-04 04:54:35,378 [wrapper] Test setup, not cleaning
[2025-06-04 07:10:30] 2025-06-04 04:54:35,419 [wrapper] apfmon messages muted
[2025-06-04 07:10:30] 2025-06-04 04:54:35,466 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:10:30] 2025-06-04 04:54:35,515 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:10:30]  *** Error codes and diagnostics ***
[2025-06-04 07:10:30]     "exeErrorCode": 0,
[2025-06-04 07:10:30]     "exeErrorDiag": "",
[2025-06-04 07:10:30]     "pilotErrorCode": 0,
[2025-06-04 07:10:30]     "pilotErrorDiag": "",
[2025-06-04 07:10:30]  *** Listing of results directory ***
[2025-06-04 07:10:30] total 384680
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:48 queuedata.json
[2025-06-04 07:10:30] -rwx------. 1 boinc boinc     37140 Jun  3 15:50 runpilot2-wrapper.sh
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:10:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:04 run_atlas
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:04 job.xml
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc 215506534 Jun  4 03:04 EVNT.45006593._001389.pool.root.1
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:04 start_atlas.sh
[2025-06-04 07:10:30] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:04 shared
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc    508883 Jun  4 03:04 input.tar.gz
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc      6391 Jun  4 03:04 init_data.xml
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:04 boinc_lockfile
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc      2525 Jun  4 03:04 pandaJob.out
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc    986069 Jun  4 03:07 agis_schedconf.cvmfs.json
[2025-06-04 07:10:30] drwx------. 4 boinc boinc      4096 Jun  4 03:07 pilot3
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc 171531587 Jun  4 06:51 HITS.45006595._034534.pool.root.1
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:51 boinc_task_state.xml
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc      1017 Jun  4 06:52 memory_monitor_summary.json
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc   1603667 Jun  4 06:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc    369113 Jun  4 06:52 log.45006595._034534.job.log.tgz.1
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc        95 Jun  4 06:54 pilot_heartbeat.json
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc      7689 Jun  4 06:54 heartbeat.json
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc      4416 Jun  4 06:54 pilotlog.txt
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc   1155832 Jun  4 06:54 log.45006595._034534.job.log.1
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc       357 Jun  4 06:54 output.list
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:54 runtime_log
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc   1546240 Jun  4 06:54 result.tar.gz
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc      8659 Jun  4 06:54 runtime_log.err
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc       656 Jun  4 06:54 dhCLDm8Chg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVRkKDmPERbNn.diag
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:10 wrapper_checkpoint.txt
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:10 boinc_mmap_file
[2025-06-04 07:10:30] -rw-r--r--. 1 boinc boinc     20517 Jun  4 07:10 stderr.txt
[2025-06-04 07:10:30] HITS file was successfully produced:
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc 171531587 Jun  4 06:51 shared/HITS.pool.root.1
[2025-06-04 07:10:30]  *** Contents of shared directory: ***
[2025-06-04 07:10:30] total 379996
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc 215506534 Jun  4 03:04 ATLAS.root_0
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:04 start_atlas.sh
[2025-06-04 07:10:30] -rw-r--r--. 2 boinc boinc    508883 Jun  4 03:04 input.tar.gz
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc 171531587 Jun  4 06:51 HITS.pool.root.1
[2025-06-04 07:10:30] -rw-------. 1 boinc boinc   1546240 Jun  4 06:54 result.tar.gz
07:10:32 (27690): run_atlas exited; CPU time 48708.155578
07:10:32 (27690): called boinc_finish(0)

</stderr_txt>
]]>

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