Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:24:26 (1538245): wrapper (7.7.26015): starting
12:24:26 (1538245): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:24:26] Arguments: --nthreads 8
[2025-06-03 12:24:26] Threads: 8
[2025-06-03 12:24:26] Checking for CVMFS
[2025-06-03 12:24:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:24:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:24:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:24:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:24:26] 2.12.6.0 706982 37798 272808 146749 2 187 23618437 25181185 4484 16776704 3 189428713 99.557 220094026 24640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:24:26] CVMFS is ok
[2025-06-03 12:24:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:24:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:24:26] Further information can be found at the LHC@home message board.
[2025-06-03 12:24:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:24:26] Checking for apptainer binary...
[2025-06-03 12:24:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:24:26] Running /usr/bin/apptainer --version
[2025-06-03 12:24:26] apptainer version 1.4.1-1.el9
[2025-06-03 12:24:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:24:26] c-16-34.aglt2.org
[2025-06-03 12:24:26] apptainer works
[2025-06-03 12:24:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:24:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:24:26] Starting ATLAS job with PandaID=6677636274
[2025-06-03 12:24:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:12:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:12:30] 2025-06-03 18:12:17,948 | INFO     | extracted standard info from prmon json
[2025-06-03 14:12:30] 2025-06-03 18:12:17,948 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:12:30] 2025-06-03 18:12:17,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:12:30] 2025-06-03 18:12:17,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:12:30] 2025-06-03 18:12:17,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:12:30] 2025-06-03 18:12:17,951 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:12:30] 2025-06-03 18:12:17,952 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,952 | INFO     | sum of deviations: 28925870599.999996
[2025-06-03 14:12:30] 2025-06-03 18:12:17,953 | INFO     | mean x: 1748971101.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,953 | INFO     | mean y: 2067184.8867924528
[2025-06-03 14:12:30] 2025-06-03 18:12:17,953 | INFO     | -- intersect: -136995137771.73367
[2025-06-03 14:12:30] 2025-06-03 18:12:17,953 | INFO     | intersect: -136995137771.73367
[2025-06-03 14:12:30] 2025-06-03 18:12:17,953 | INFO     | chi2: 4.426829499604644
[2025-06-03 14:12:30] 2025-06-03 18:12:17,954 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,954 | INFO     | sum of deviations: 33480622808.999992
[2025-06-03 14:12:30] 2025-06-03 18:12:17,954 | INFO     | mean x: 1748970949.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | mean y: 2080437.3168316833
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | -- intersect: -183303697477.19336
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | intersect: -183303697477.19336
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | chi2: 3.6903728053793157
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | current chi2=3.6903728053793157 (change=16.63621095619563 %)
[2025-06-03 14:12:30] 2025-06-03 18:12:17,955 | INFO     | right removable region: 100
[2025-06-03 14:12:30] 2025-06-03 18:12:17,956 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,956 | INFO     | sum of deviations: 6971946200.000001
[2025-06-03 14:12:30] 2025-06-03 18:12:17,956 | INFO     | mean x: 1748971254.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,956 | INFO     | mean y: 2134020.4554455443
[2025-06-03 14:12:30] 2025-06-03 18:12:17,956 | INFO     | -- intersect: -38169146481.93183
[2025-06-03 14:12:30] 2025-06-03 18:12:17,957 | INFO     | intersect: -38169146481.93183
[2025-06-03 14:12:30] 2025-06-03 18:12:17,957 | INFO     | chi2: 1.9269433369047935
[2025-06-03 14:12:30] 2025-06-03 18:12:17,957 | INFO     | current chi2=1.9269433369047935 (change=56.47125471905148 %)
[2025-06-03 14:12:30] 2025-06-03 18:12:17,957 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,958 | INFO     | sum of deviations: -7437169867.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,958 | INFO     | mean x: 1748971406.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,958 | INFO     | mean y: 2182490.15625
[2025-06-03 14:12:30] 2025-06-03 18:12:17,958 | INFO     | -- intersect: 47420420676.42703
[2025-06-03 14:12:30] 2025-06-03 18:12:17,958 | INFO     | intersect: 47420420676.42703
[2025-06-03 14:12:30] 2025-06-03 18:12:17,959 | INFO     | chi2: 0.8610357029967546
[2025-06-03 14:12:30] 2025-06-03 18:12:17,959 | INFO     | current chi2=0.8610357029967546 (change=55.315982234339224 %)
[2025-06-03 14:12:30] 2025-06-03 18:12:17,959 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,959 | INFO     | sum of deviations: -9322918042.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | mean x: 1748971559.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | mean y: 2189311.758241758
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | -- intersect: 69790785179.24043
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | intersect: 69790785179.24043
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | chi2: 0.7969370363615355
[2025-06-03 14:12:30] 2025-06-03 18:12:17,960 | INFO     | current chi2=0.7969370363615355 (change=7.44436803400018 %)
[2025-06-03 14:12:30] 2025-06-03 18:12:17,961 | INFO     | left removable region: 30
[2025-06-03 14:12:30] 2025-06-03 18:12:17,961 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,961 | INFO     | sum of deviations: -2564400289.0
[2025-06-03 14:12:30] 2025-06-03 18:12:17,961 | INFO     | mean x: 1748971833.5
[2025-06-03 14:12:30] 2025-06-03 18:12:17,961 | INFO     | mean y: 2205484.8857142855
[2025-06-03 14:12:30] 2025-06-03 18:12:17,962 | INFO     | -- intersect: 42180083759.337204
[2025-06-03 14:12:30] 2025-06-03 18:12:17,962 | INFO     | intersect: 42180083759.337204
[2025-06-03 14:12:30] 2025-06-03 18:12:17,962 | INFO     | chi2: 0.040093630537229634
[2025-06-03 14:12:30] 2025-06-03 18:12:17,962 | INFO     | -- intersect: 42180083759.337204
[2025-06-03 14:12:30] 2025-06-03 18:12:17,962 | INFO     | current memory leak: -24.12 B/s (using 70 data points, chi2=0.04)
[2025-06-03 14:12:30] 2025-06-03 18:12:17,963 | INFO     | ..............................
[2025-06-03 14:12:30] 2025-06-03 18:12:17,963 | INFO     | . Timing measurements:
[2025-06-03 14:12:30] 2025-06-03 18:12:17,963 | INFO     | . get job = 0 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,963 | INFO     | . initial setup = 2 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,963 | INFO     | . payload setup = 4 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,964 | INFO     | . stage-in = 0 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,964 | INFO     | . payload execution = 6430 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,964 | INFO     | . stage-out = 0 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,964 | INFO     | . log creation = 0 s
[2025-06-03 14:12:30] 2025-06-03 18:12:17,964 | INFO     | ..............................
[2025-06-03 14:12:30] 2025-06-03 18:12:18,067 | INFO     | 
[2025-06-03 14:12:30] 2025-06-03 18:12:18,067 | INFO     | job summary report
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | --------------------------------------------------
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | PanDA job id: 6677636274
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | task id: 45006595
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | errors: (none)
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | pilot state: finished 
[2025-06-03 14:12:30] 2025-06-03 18:12:18,068 | INFO     | transexitcode: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | exeerrorcode: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | exeerrordiag: 
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | exitcode: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | exitmsg: OK
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | cpuconsumptiontime: 44503 s
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | nevents: 400
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | neventsw: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:18,069 | INFO     | pid: 1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | pgrp: 1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | corecount: 8
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | event service: False
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 6439: 2432484, 6441: 2441425, 6442: 2441609, 6447: 2441779}
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | --------------------------------------------------
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | 
[2025-06-03 14:12:30] 2025-06-03 18:12:18,070 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 14:12:30] 2025-06-03 18:12:18,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:12:30] 2025-06-03 18:12:18,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,092 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:12:30] 2025-06-03 18:12:18,092 | INFO     | job 6677636274 has completed (purged errors)
[2025-06-03 14:12:30] 2025-06-03 18:12:18,092 | INFO     | overall cleanup function is called
[2025-06-03 14:12:30] 2025-06-03 18:12:19,100 | INFO     | --- collectZombieJob: --- 10, [1548856]
[2025-06-03 14:12:30] 2025-06-03 18:12:19,101 | INFO     | zombie collector waiting for pid 1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:19,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:12:30] 2025-06-03 18:12:19,101 | INFO     | collected zombie processes
[2025-06-03 14:12:30] 2025-06-03 18:12:19,101 | INFO     | will attempt to kill all subprocesses of pid=1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:19,490 | INFO     | process IDs to be killed: [1548856] (in reverse order)
[2025-06-03 14:12:30] 2025-06-03 18:12:19,583 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:12:30] 2025-06-03 18:12:19,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:12:30] 2025-06-03 18:12:19,596 | INFO     | did not find any defunct processes belonging to 1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:19,608 | INFO     | did not find any defunct processes belonging to 1548856
[2025-06-03 14:12:30] 2025-06-03 18:12:19,608 | INFO     | ready for new job
[2025-06-03 14:12:30] 2025-06-03 18:12:19,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:12:30] 2025-06-03 18:12:19,610 | INFO     | **************************************
[2025-06-03 14:12:30] 2025-06-03 18:12:19,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:12:30] 2025-06-03 18:12:19,611 | INFO     | **************************************
[2025-06-03 14:12:30] 2025-06-03 18:12:19,611 | INFO     | 
[2025-06-03 14:12:30] 2025-06-03 18:12:19,614 | INFO     | architecture information:
[2025-06-03 14:12:30] 2025-06-03 18:12:19,614 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:12:30] 2025-06-03 18:12:19,626 | INFO     | cat /etc/os-release:
[2025-06-03 14:12:30] NAME="CentOS Linux"
[2025-06-03 14:12:30] VERSION="7 (Core)"
[2025-06-03 14:12:30] ID="centos"
[2025-06-03 14:12:30] ID_LIKE="rhel fedora"
[2025-06-03 14:12:30] VERSION_ID="7"
[2025-06-03 14:12:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:12:30] ANSI_COLOR="0;31"
[2025-06-03 14:12:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:12:30] HOME_URL="https://www.centos.org/"
[2025-06-03 14:12:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:12:30] 
[2025-06-03 14:12:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:12:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:12:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:12:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:12:30] 
[2025-06-03 14:12:30] 2025-06-03 18:12:19,626 | INFO     | **************************************
[2025-06-03 14:12:30] 2025-06-03 18:12:20,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 14:12:30] 2025-06-03 18:12:20,155 | INFO     | sufficient remaining disk space (61793632256 B)
[2025-06-03 14:12:30] 2025-06-03 18:12:20,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:12:30] 2025-06-03 18:12:20,156 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:12:30] 2025-06-03 18:12:20,156 | INFO     | update_server=False
[2025-06-03 14:12:30] 2025-06-03 18:12:20,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:12:30] 2025-06-03 18:12:20,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:12:30] 2025-06-03 18:12:20,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:12:30] 2025-06-03 18:12:20,616 | INFO     | PID=1541891 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 14:12:30] 2025-06-03 18:12:20,638 | INFO     | .. there are 15 such processes running
[2025-06-03 14:12:30] 2025-06-03 18:12:20,638 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:12:30] 2025-06-03 18:12:20,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:12:30] 2025-06-03 18:12:20,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:12:30] 2025-06-03 18:12:20,864 | INFO     | all data control threads have been joined
[2025-06-03 14:12:30] 2025-06-03 18:12:20,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:12:30] 2025-06-03 18:12:20,883 | INFO     | aborting loop
[2025-06-03 14:12:30] 2025-06-03 18:12:21,161 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:21,335 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:21,465 | INFO     | all payload control threads have been joined
[2025-06-03 14:12:30] 2025-06-03 18:12:21,496 | INFO     | all job control threads have been joined
[2025-06-03 14:12:30] 2025-06-03 18:12:21,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:21,724 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:21,869 | INFO     | [data] control thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:21,889 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,099 | INFO     | [job] validate thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,162 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,173 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,234 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,470 | INFO     | [payload] control thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,498 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,501 | INFO     | [job] control thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:22,624 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:23,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:12:30] 2025-06-03 18:12:24,085 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:24,164 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:12:30] 2025-06-03 18:12:24,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532033046336)>', '<ExcThread(monitor, started 140531187312384)>']
[2025-06-03 14:12:30] 2025-06-03 18:12:25,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:12:30] 2025-06-03 18:12:25,663 | INFO     | [monitor] control thread has ended
[2025-06-03 14:12:30] 2025-06-03 18:12:29,713 | INFO     | all workflow threads have been joined
[2025-06-03 14:12:30] 2025-06-03 18:12:29,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:12:30] 2025-06-03 18:12:29,714 | INFO     | traces error code: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:29,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:12:30] 2025-06-03 18:12:29,862 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:12:30] 2025-06-03 18:12:29,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:12:30] 2025-06-03 18:12:29,869 [wrapper] pilotpid: 1541891
[2025-06-03 14:12:30] 2025-06-03 18:12:29,873 [wrapper] Pilot exit status: 0
[2025-06-03 14:12:30] 2025-06-03 18:12:29,886 [wrapper] pandaids: 6677636274
[2025-06-03 14:12:30] 2025-06-03 18:12:29,952 [wrapper] cleanup supervisor_pilot 1886815 1541892
[2025-06-03 14:12:30] 2025-06-03 18:12:29,956 [wrapper] Test setup, not cleaning
[2025-06-03 14:12:30] 2025-06-03 18:12:29,958 [wrapper] apfmon messages muted
[2025-06-03 14:12:30] 2025-06-03 18:12:29,961 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:12:30] 2025-06-03 18:12:29,964 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:12:30]  *** Error codes and diagnostics ***
[2025-06-03 14:12:30]     "exeErrorCode": 0,
[2025-06-03 14:12:30]     "exeErrorDiag": "",
[2025-06-03 14:12:30]     "pilotErrorCode": 0,
[2025-06-03 14:12:30]     "pilotErrorDiag": "",
[2025-06-03 14:12:30]  *** Listing of results directory ***
[2025-06-03 14:12:30] total 396044
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:39 queuedata.json
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 14:12:30] -rwx------. 1 boincer umatlas     37140 Jun  3 09:40 runpilot2-wrapper.sh
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:12:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:24 run_atlas
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:24 job.xml
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas 216259170 Jun  3 12:24 EVNT.45006593._001382.pool.root.1
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:24 start_atlas.sh
[2025-06-03 14:12:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:24 shared
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:24 input.tar.gz
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:24 boinc_lockfile
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:24 pandaJob.out
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas    983734 Jun  3 12:24 agis_schedconf.cvmfs.json
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:12:30] drwx------. 4 boincer umatlas      4096 Jun  3 12:24 pilot3
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 14:00 init_data.xml
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas 183563865 Jun  3 14:11 HITS.45006595._034373.pool.root.1
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:11 boinc_task_state.xml
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas        95 Jun  3 14:11 pilot_heartbeat.json
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas      1032 Jun  3 14:12 memory_monitor_summary.json
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas    332272 Jun  3 14:12 log.45006595._034373.job.log.tgz.1
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas      7708 Jun  3 14:12 heartbeat.json
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:12 boinc_mmap_file
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:12 wrapper_checkpoint.txt
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas      4749 Jun  3 14:12 pilotlog.txt
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas    614664 Jun  3 14:12 log.45006595._034373.job.log.1
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas       357 Jun  3 14:12 output.list
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:12 runtime_log
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas    962560 Jun  3 14:12 result.tar.gz
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 14:12 runtime_log.err
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas       650 Jun  3 14:12 lEAMDmT3gg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCnYKDmztg1Co.diag
[2025-06-03 14:12:30] -rw-r--r--. 1 boincer umatlas     20870 Jun  3 14:12 stderr.txt
[2025-06-03 14:12:30] HITS file was successfully produced:
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas 183563865 Jun  3 14:11 shared/HITS.pool.root.1
[2025-06-03 14:12:30]  *** Contents of shared directory: ***
[2025-06-03 14:12:30] total 391916
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas 216259170 Jun  3 12:24 ATLAS.root_0
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:24 start_atlas.sh
[2025-06-03 14:12:30] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:24 input.tar.gz
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas 183563865 Jun  3 14:11 HITS.pool.root.1
[2025-06-03 14:12:30] -rw-------. 1 boincer umatlas    962560 Jun  3 14:12 result.tar.gz
14:12:31 (1538245): run_atlas exited; CPU time 44702.964825
14:12:31 (1538245): called boinc_finish(0)

</stderr_txt>
]]>

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