Name 8ZrMDm8Zdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyJjKDmGSazzm_3
Workunit 232812862
Created 3 Jun 2025, 15:18:21 UTC
Sent 3 Jun 2025, 16:25:51 UTC
Report deadline 11 Jun 2025, 16:25:51 UTC
Received 3 Jun 2025, 17:48:07 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856811
Run time 1 hours 11 min 37 sec
CPU time 8 hours 9 min 5 sec
Validate state Valid
Credit 97.95
Device peak FLOPS 35.15 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.68 GB
Peak swap size 3.01 GB
Peak disk usage 579.46 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:26:08 (2201353): wrapper (7.7.26015): starting
12:26:08 (2201353): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:26:08] Arguments: --nthreads 8
[2025-06-03 12:26:08] Threads: 8
[2025-06-03 12:26:08] Checking for CVMFS
[2025-06-03 12:26:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:26:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:26:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:26:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:26:08] 2.12.6.0 5533 30302 422224 146749 1 61 17974420 32935936 5496 16776704 1 119841913 99.613 116217817 31736 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:26:08] CVMFS is ok
[2025-06-03 12:26:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:26:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:26:08] Further information can be found at the LHC@home message board.
[2025-06-03 12:26:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:26:08] Checking for apptainer binary...
[2025-06-03 12:26:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:26:08] Running /usr/bin/apptainer --version
[2025-06-03 12:26:08] apptainer version 1.4.1-1.el9
[2025-06-03 12:26:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:26:08] c6-2-29-3.aglt2.org
[2025-06-03 12:26:08] apptainer works
[2025-06-03 12:26:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:26:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:26:08] Starting ATLAS job with PandaID=6677553624
[2025-06-03 12:26:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:40:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:40:03]  status=None
[2025-06-03 13:40:03]  status_code=0
[2025-06-03 13:40:03]  storage_token=
[2025-06-03 13:40:03]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677553624/log.45006595._027856.job.log.tgz.1
[2025-06-03 13:40:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/b1/log.45006595._027856.job.log.tgz.1
[2025-06-03 13:40:03]  workdir=None
[2025-06-03 13:40:03] ]
[2025-06-03 13:40:03] 2025-06-03 17:39:43,299 | INFO     | transferring file log.45006595._027856.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/log.45006595._027856.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:40:03] 2025-06-03 17:39:43,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/log.45006595._027856.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._027856.job
[2025-06-03 13:40:03] 2025-06-03 17:39:43,316 | INFO     | adding to output.list: log.45006595._027856.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/b1/log.45006595._027856.job.log.tg
[2025-06-03 13:40:03] 2025-06-03 17:39:43,317 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:40:03] 2025-06-03 17:39:43,317 | INFO     | summary of transferred files:
[2025-06-03 13:40:03] 2025-06-03 17:39:43,317 | INFO     |  -- lfn=log.45006595._027856.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:40:03] 2025-06-03 17:39:43,317 | INFO     | stage-out finished correctly
[2025-06-03 13:40:03] 2025-06-03 17:39:43,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:40:03] 2025-06-03 17:39:44,858 | INFO     | 4408s have passed since pilot start - server update state is 'RUNNING'
[2025-06-03 13:40:03] 2025-06-03 17:39:45,885 | WARNING  | process 2211509 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 13:40:03] 2025-06-03 17:39:45,885 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,886 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,887 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3296316 B
[2025-06-03 13:40:03] 2025-06-03 17:39:45,887 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15301 B
[2025-06-03 13:40:03] 2025-06-03 17:39:45,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 13:40:03] 2025-06-03 17:39:45,901 | INFO     | sufficient remaining disk space (73531392000 B)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,902 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,903 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6677553624: 3592546 B (within 2537553920 B limit)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,903 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6677553624/HITS.45006595._027856.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,903 | INFO     | total size of present files: 0 B (workdir size: 3592546 B)
[2025-06-03 13:40:03] 2025-06-03 17:39:45,903 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/HITS.45006595._027856.pool.root.1 since it does not exist
[2025-06-03 13:40:03] 2025-06-03 17:39:46,136 | INFO     | number of running child processes to parent process 2211509: 1
[2025-06-03 13:40:03] 2025-06-03 17:39:46,136 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:40:03] 2025-06-03 17:39:46,140 | INFO     | job 6677553624 has state=finished
[2025-06-03 13:40:03] 2025-06-03 17:39:46,141 | INFO     | preparing for final server update for job 6677553624 in state='finished'
[2025-06-03 13:40:03] 2025-06-03 17:39:46,141 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:40:03] 2025-06-03 17:39:46,141 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:40:03] 2025-06-03 17:39:46,141 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:40:03] 2025-06-03 17:39:46,141 | INFO     | job 6677553624 has finished - writing final server update
[2025-06-03 13:40:03] 2025-06-03 17:39:46,142 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:40:03] 2025-06-03 17:39:46,158 | INFO     | executing command: lscpu
[2025-06-03 13:40:03] 2025-06-03 17:39:46,217 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:40:03] 2025-06-03 17:39:48,639 | INFO     | monitor loop #328: job 0:6677553624 is in state 'finished'
[2025-06-03 13:40:03] 2025-06-03 17:39:48,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,601 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:40:03] 2025-06-03 17:39:49,601 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677553624/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,602 | INFO     | extracted standard info from prmon json
[2025-06-03 13:40:03] 2025-06-03 17:39:49,602 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:40:03] 2025-06-03 17:39:49,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:40:03] 2025-06-03 17:39:49,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:40:03] 2025-06-03 17:39:49,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:40:03] 2025-06-03 17:39:49,604 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:40:03] 2025-06-03 17:39:49,605 | INFO     | sum of square deviations: 85136480.0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,605 | INFO     | sum of deviations: 7185230991.999999
[2025-06-03 13:40:03] 2025-06-03 17:39:49,605 | INFO     | mean x: 1748970262.0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,605 | INFO     | mean y: 2165576.446153846
[2025-06-03 13:40:03] 2025-06-03 17:39:49,605 | INFO     | -- intersect: -147605009756.72192
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | intersect: -147605009756.72192
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | chi2: 1.13788871837286
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | -- intersect: -147605009756.72192
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | current memory leak: 84.40 B/s (using 65 data points, chi2=1.14)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | ..............................
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | . Timing measurements:
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | . get job = 0 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,606 | INFO     | . initial setup = 2 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | . payload setup = 6 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | . stage-in = 0 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | . payload execution = 4378 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | . stage-out = 0 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | . log creation = 0 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,607 | INFO     | ..............................
[2025-06-03 13:40:03] 2025-06-03 17:39:49,693 | INFO     | 
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | job summary report
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | --------------------------------------------------
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | PanDA job id: 6677553624
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | task id: 45006595
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | errors: (none)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | pilot state: finished 
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | transexitcode: 0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | exeerrorcode: 0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | exeerrordiag: 
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | exitcode: 0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | exitmsg: OK
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | cpuconsumptiontime: 29168 s
[2025-06-03 13:40:03] 2025-06-03 17:39:49,694 | INFO     | nevents: 400
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | neventsw: 0
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | pid: 2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | pgrp: 2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | corecount: 8
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | event service: False
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 4388: 2431476, 4389: 2440417, 4390: 2440601, 4396: 2440799}
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | --------------------------------------------------
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | 
[2025-06-03 13:40:03] 2025-06-03 17:39:49,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 13:40:03] 2025-06-03 17:39:49,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:40:03] 2025-06-03 17:39:49,716 | INFO     | job 6677553624 has completed (purged errors)
[2025-06-03 13:40:03] 2025-06-03 17:39:49,716 | INFO     | overall cleanup function is called
[2025-06-03 13:40:03] 2025-06-03 17:39:50,724 | INFO     | --- collectZombieJob: --- 10, [2211509]
[2025-06-03 13:40:03] 2025-06-03 17:39:50,724 | INFO     | zombie collector waiting for pid 2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:50,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:40:03] 2025-06-03 17:39:50,724 | INFO     | collected zombie processes
[2025-06-03 13:40:03] 2025-06-03 17:39:50,724 | INFO     | will attempt to kill all subprocesses of pid=2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:50,957 | INFO     | process IDs to be killed: [2211509] (in reverse order)
[2025-06-03 13:40:03] 2025-06-03 17:39:51,029 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:40:03] 2025-06-03 17:39:51,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:40:03] 2025-06-03 17:39:51,037 | INFO     | did not find any defunct processes belonging to 2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:51,044 | INFO     | did not find any defunct processes belonging to 2211509
[2025-06-03 13:40:03] 2025-06-03 17:39:51,045 | INFO     | ready for new job
[2025-06-03 13:40:03] 2025-06-03 17:39:51,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:40:03] 2025-06-03 17:39:51,046 | INFO     | **************************************
[2025-06-03 13:40:03] 2025-06-03 17:39:51,046 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:40:03] 2025-06-03 17:39:51,046 | INFO     | **************************************
[2025-06-03 13:40:03] 2025-06-03 17:39:51,046 | INFO     | 
[2025-06-03 13:40:03] 2025-06-03 17:39:51,062 | INFO     | architecture information:
[2025-06-03 13:40:03] 2025-06-03 17:39:51,062 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:40:03] 2025-06-03 17:39:51,075 | INFO     | cat /etc/os-release:
[2025-06-03 13:40:03] NAME="CentOS Linux"
[2025-06-03 13:40:03] VERSION="7 (Core)"
[2025-06-03 13:40:03] ID="centos"
[2025-06-03 13:40:03] ID_LIKE="rhel fedora"
[2025-06-03 13:40:03] VERSION_ID="7"
[2025-06-03 13:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:40:03] ANSI_COLOR="0;31"
[2025-06-03 13:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:40:03] HOME_URL="https://www.centos.org/"
[2025-06-03 13:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:40:03] 
[2025-06-03 13:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:40:03] 
[2025-06-03 13:40:03] 2025-06-03 17:39:51,075 | INFO     | **************************************
[2025-06-03 13:40:03] 2025-06-03 17:39:51,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 13:40:03] 2025-06-03 17:39:51,592 | INFO     | sufficient remaining disk space (73533489152 B)
[2025-06-03 13:40:03] 2025-06-03 17:39:51,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:40:03] 2025-06-03 17:39:51,592 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:40:03] 2025-06-03 17:39:51,592 | INFO     | update_server=False
[2025-06-03 13:40:03] 2025-06-03 17:39:51,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:40:03] 2025-06-03 17:39:51,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:03] 2025-06-03 17:39:51,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:40:03] 2025-06-03 17:39:51,816 | INFO     | all payload control threads have been joined
[2025-06-03 13:40:03] 2025-06-03 17:39:51,878 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:40:03] 2025-06-03 17:39:51,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:40:03] 2025-06-03 17:39:51,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:40:03] 2025-06-03 17:39:52,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:03] 2025-06-03 17:39:52,153 | INFO     | aborting loop
[2025-06-03 13:40:03] 2025-06-03 17:39:52,416 | INFO     | all job control threads have been joined
[2025-06-03 13:40:03] 2025-06-03 17:39:52,598 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:52,598 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:52,614 | INFO     | all data control threads have been joined
[2025-06-03 13:40:03] 2025-06-03 17:39:52,821 | INFO     | [payload] control thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:52,824 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,071 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,158 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,296 | INFO     | [job] validate thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,389 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,421 | INFO     | [job] control thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,423 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,596 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,617 | INFO     | [data] control thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,645 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:53,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:40:03] 2025-06-03 17:39:57,995 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:40:03] 2025-06-03 17:39:58,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684367226688)>', '<ExcThread(monitor, started 139683140990720)>']
[2025-06-03 13:40:03] 2025-06-03 17:39:58,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:40:03] 2025-06-03 17:39:58,908 | INFO     | [monitor] control thread has ended
[2025-06-03 13:40:03] 2025-06-03 17:40:03,580 | INFO     | all workflow threads have been joined
[2025-06-03 13:40:03] 2025-06-03 17:40:03,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:40:03] 2025-06-03 17:40:03,581 | INFO     | traces error code: 0
[2025-06-03 13:40:03] 2025-06-03 17:40:03,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:40:03] 2025-06-03 17:40:03,714 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:40:03] 2025-06-03 17:40:03,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:40:03] 2025-06-03 17:40:03,719 [wrapper] pilotpid: 2205069
[2025-06-03 13:40:03] 2025-06-03 17:40:03,722 [wrapper] Pilot exit status: 0
[2025-06-03 13:40:03] 2025-06-03 17:40:03,732 [wrapper] pandaids: 6677553624
[2025-06-03 13:40:03] 2025-06-03 17:40:03,782 [wrapper] cleanup supervisor_pilot 2395061 2205070
[2025-06-03 13:40:03] 2025-06-03 17:40:03,785 [wrapper] Test setup, not cleaning
[2025-06-03 13:40:03] 2025-06-03 17:40:03,788 [wrapper] apfmon messages muted
[2025-06-03 13:40:03] 2025-06-03 17:40:03,790 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:40:03] 2025-06-03 17:40:03,793 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:40:03]  *** Error codes and diagnostics ***
[2025-06-03 13:40:03]     "exeErrorCode": 0,
[2025-06-03 13:40:03]     "exeErrorDiag": "",
[2025-06-03 13:40:03]     "pilotErrorCode": 0,
[2025-06-03 13:40:03]     "pilotErrorDiag": "",
[2025-06-03 13:40:03]  *** Listing of results directory ***
[2025-06-03 13:40:03] total 390256
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 05:56 pilot3.tar.gz
[2025-06-03 13:40:03] -rwx------. 1 boincer umatlas     37140 Jun  3 05:57 runpilot2-wrapper.sh
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 05:57 queuedata.json
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:40:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:26 run_atlas
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:26 job.xml
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas 216126015 Jun  3 12:26 EVNT.45006593._001114.pool.root.1
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 12:26 input.tar.gz
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:26 start_atlas.sh
[2025-06-03 13:40:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:26 shared
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:26 boinc_lockfile
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:26 pandaJob.out
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas    983734 Jun  3 12:26 agis_schedconf.cvmfs.json
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:40:03] drwx------. 4 boincer umatlas      4096 Jun  3 12:26 pilot3
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas 178181648 Jun  3 13:39 HITS.45006595._027856.pool.root.1
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:39 boinc_task_state.xml
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas      6843 Jun  3 13:39 init_data.xml
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas        95 Jun  3 13:39 pilot_heartbeat.json
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas      1046 Jun  3 13:39 memory_monitor_summary.json
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas    300466 Jun  3 13:39 log.45006595._027856.job.log.tgz.1
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas      7711 Jun  3 13:39 heartbeat.json
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:40 wrapper_checkpoint.txt
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:40 boinc_mmap_file
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas      4353 Jun  3 13:40 pilotlog.txt
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas    438135 Jun  3 13:40 log.45006595._027856.job.log.1
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas       357 Jun  3 13:40 output.list
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:40 runtime_log
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas    757760 Jun  3 13:40 result.tar.gz
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 13:40 runtime_log.err
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas       652 Jun  3 13:40 8ZrMDm8Zdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyJjKDmGSazzm.diag
[2025-06-03 13:40:03] -rw-r--r--. 1 boincer umatlas     22250 Jun  3 13:40 stderr.txt
[2025-06-03 13:40:03] HITS file was successfully produced:
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas 178181648 Jun  3 13:39 shared/HITS.pool.root.1
[2025-06-03 13:40:03]  *** Contents of shared directory: ***
[2025-06-03 13:40:03] total 386336
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas 216126015 Jun  3 12:26 ATLAS.root_0
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 12:26 input.tar.gz
[2025-06-03 13:40:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:26 start_atlas.sh
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas 178181648 Jun  3 13:39 HITS.pool.root.1
[2025-06-03 13:40:03] -rw-------. 1 boincer umatlas    757760 Jun  3 13:40 result.tar.gz
13:40:05 (2201353): run_atlas exited; CPU time 29262.892327
13:40:05 (2201353): called boinc_finish(0)

</stderr_txt>
]]>


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