Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:26:19 (2793078): wrapper (7.7.26015): starting
12:26:19 (2793078): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:26:19] Arguments: --nthreads 8
[2025-06-03 12:26:19] Threads: 8
[2025-06-03 12:26:19] Checking for CVMFS
[2025-06-03 12:26:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:26:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:26:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:26:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:26:19] 2.12.6.0 4122838 22086 428548 146749 1 197 22512748 32935937 4907 16776704 0 61519858 99.623 74453362 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:26:19] CVMFS is ok
[2025-06-03 12:26:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:26:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:26:19] Further information can be found at the LHC@home message board.
[2025-06-03 12:26:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:26:19] Checking for apptainer binary...
[2025-06-03 12:26:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:26:19] Running /usr/bin/apptainer --version
[2025-06-03 12:26:19] apptainer version 1.4.1-1.el9
[2025-06-03 12:26:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:26:19] c6-6-39-3.aglt2.org
[2025-06-03 12:26:19] apptainer works
[2025-06-03 12:26:19] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:26:19] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:26:19] Starting ATLAS job with PandaID=6677635745
[2025-06-03 12:26:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:33:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:33:39]  guid=3b7060a9-2a22-49be-84d5-b9542feae80e
[2025-06-03 13:33:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:33:39]  is_altstaged=None
[2025-06-03 13:33:39]  is_tar=False
[2025-06-03 13:33:39]  lfn=log.45006595._034249.job.log.tgz.1
[2025-06-03 13:33:39]  mtime=0
[2025-06-03 13:33:39]  protocol_id=None
[2025-06-03 13:33:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:33:39]  replicas=None
[2025-06-03 13:33:39]  scope=mc23_13p6TeV
[2025-06-03 13:33:39]  status=None
[2025-06-03 13:33:39]  status_code=0
[2025-06-03 13:33:39]  storage_token=
[2025-06-03 13:33:39]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677635745/log.45006595._034249.job.log.tgz.1
[2025-06-03 13:33:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/ab/log.45006595._034249.job.log.tgz.1
[2025-06-03 13:33:39]  workdir=None
[2025-06-03 13:33:39] ]
[2025-06-03 13:33:39] 2025-06-03 17:33:11,065 | INFO     | transferring file log.45006595._034249.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677635745/log.45006595._034249.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:33:39] 2025-06-03 17:33:11,065 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677635745/log.45006595._034249.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._034249.job
[2025-06-03 13:33:39] 2025-06-03 17:33:11,082 | INFO     | adding to output.list: log.45006595._034249.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/ab/log.45006595._034249.job.log.tg
[2025-06-03 13:33:39] 2025-06-03 17:33:11,083 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:33:39] 2025-06-03 17:33:11,083 | INFO     | summary of transferred files:
[2025-06-03 13:33:39] 2025-06-03 17:33:11,083 | INFO     |  -- lfn=log.45006595._034249.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:33:39] 2025-06-03 17:33:11,083 | INFO     | stage-out finished correctly
[2025-06-03 13:33:39] 2025-06-03 17:33:12,633 | INFO     | monitor loop #300: job 0:6677635745 is in state 'finished'
[2025-06-03 13:33:39] 2025-06-03 17:33:12,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:33:39] 2025-06-03 17:33:12,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:33:39] 2025-06-03 17:33:15,136 | INFO     | monitor loop #301: job 0:6677635745 is in state 'finished'
[2025-06-03 13:33:39] 2025-06-03 17:33:15,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:33:39] 2025-06-03 17:33:15,466 | INFO     | job 6677635745 has state=finished
[2025-06-03 13:33:39] 2025-06-03 17:33:15,466 | INFO     | preparing for final server update for job 6677635745 in state='finished'
[2025-06-03 13:33:39] 2025-06-03 17:33:15,466 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:33:39] 2025-06-03 17:33:15,467 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:33:39] 2025-06-03 17:33:15,467 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:33:39] 2025-06-03 17:33:15,467 | INFO     | job 6677635745 has finished - writing final server update
[2025-06-03 13:33:39] 2025-06-03 17:33:15,467 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:33:39] 2025-06-03 17:33:15,482 | INFO     | executing command: lscpu
[2025-06-03 13:33:39] 2025-06-03 17:33:15,558 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:33:39] 2025-06-03 17:33:17,639 | INFO     | monitor loop #302: job 0:6677635745 is in state 'finished'
[2025-06-03 13:33:39] 2025-06-03 17:33:17,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,183 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:33:39] 2025-06-03 17:33:19,183 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677635745/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,184 | INFO     | extracted standard info from prmon json
[2025-06-03 13:33:39] 2025-06-03 17:33:19,185 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:33:39] 2025-06-03 17:33:19,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:33:39] 2025-06-03 17:33:19,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:33:39] 2025-06-03 17:33:19,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:33:39] 2025-06-03 17:33:19,187 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:33:39] 2025-06-03 17:33:19,187 | INFO     | sum of square deviations: 63666310.0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,187 | INFO     | sum of deviations: 6677255078.0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,187 | INFO     | mean x: 1748970083.0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,187 | INFO     | mean y: 2169989.627118644
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | -- intersect: -183427957623.89145
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | intersect: -183427957623.89145
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | chi2: 0.8421344758517822
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | -- intersect: -183427957623.89145
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | current memory leak: 104.88 B/s (using 59 data points, chi2=0.84)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | ..............................
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | . Timing measurements:
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | . get job = 0 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,188 | INFO     | . initial setup = 2 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | . payload setup = 4 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | . stage-in = 0 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | . payload execution = 3979 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | . stage-out = 0 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | . log creation = 0 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,189 | INFO     | ..............................
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | 
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | job summary report
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | --------------------------------------------------
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | PanDA job id: 6677635745
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | task id: 45006595
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | errors: (none)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | pilot state: finished 
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | transexitcode: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,481 | INFO     | exeerrorcode: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | exeerrordiag: 
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | exitcode: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | exitmsg: OK
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | cpuconsumptiontime: 26984 s
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | nevents: 400
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | neventsw: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | pid: 2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | pgrp: 2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | corecount: 8
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | event service: False
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 3988: 2431240, 3990: 2440181, 3992: 2440237, 3998: 2440535}
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | --------------------------------------------------
[2025-06-03 13:33:39] 2025-06-03 17:33:19,482 | INFO     | 
[2025-06-03 13:33:39] 2025-06-03 17:33:19,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 13:33:39] 2025-06-03 17:33:19,500 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | job 6677635745 has completed (purged errors)
[2025-06-03 13:33:39] 2025-06-03 17:33:19,502 | INFO     | overall cleanup function is called
[2025-06-03 13:33:39] 2025-06-03 17:33:20,510 | INFO     | --- collectZombieJob: --- 10, [2804488]
[2025-06-03 13:33:39] 2025-06-03 17:33:20,510 | INFO     | zombie collector waiting for pid 2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:20,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:33:39] 2025-06-03 17:33:20,510 | INFO     | collected zombie processes
[2025-06-03 13:33:39] 2025-06-03 17:33:20,510 | INFO     | will attempt to kill all subprocesses of pid=2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:20,742 | INFO     | process IDs to be killed: [2804488] (in reverse order)
[2025-06-03 13:33:39] 2025-06-03 17:33:20,819 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:33:39] 2025-06-03 17:33:20,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:33:39] 2025-06-03 17:33:20,828 | INFO     | did not find any defunct processes belonging to 2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:20,835 | INFO     | did not find any defunct processes belonging to 2804488
[2025-06-03 13:33:39] 2025-06-03 17:33:20,836 | INFO     | ready for new job
[2025-06-03 13:33:39] 2025-06-03 17:33:20,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:33:39] 2025-06-03 17:33:20,837 | INFO     | **************************************
[2025-06-03 13:33:39] 2025-06-03 17:33:20,837 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:33:39] 2025-06-03 17:33:20,837 | INFO     | **************************************
[2025-06-03 13:33:39] 2025-06-03 17:33:20,837 | INFO     | 
[2025-06-03 13:33:39] 2025-06-03 17:33:20,852 | INFO     | architecture information:
[2025-06-03 13:33:39] 2025-06-03 17:33:20,852 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:33:39] 2025-06-03 17:33:20,867 | INFO     | cat /etc/os-release:
[2025-06-03 13:33:39] NAME="CentOS Linux"
[2025-06-03 13:33:39] VERSION="7 (Core)"
[2025-06-03 13:33:39] ID="centos"
[2025-06-03 13:33:39] ID_LIKE="rhel fedora"
[2025-06-03 13:33:39] VERSION_ID="7"
[2025-06-03 13:33:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:33:39] ANSI_COLOR="0;31"
[2025-06-03 13:33:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:33:39] HOME_URL="https://www.centos.org/"
[2025-06-03 13:33:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:33:39] 
[2025-06-03 13:33:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:33:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:33:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:33:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:33:39] 
[2025-06-03 13:33:39] 2025-06-03 17:33:20,868 | INFO     | **************************************
[2025-06-03 13:33:39] 2025-06-03 17:33:21,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 13:33:39] 2025-06-03 17:33:21,385 | INFO     | sufficient remaining disk space (72921120768 B)
[2025-06-03 13:33:39] 2025-06-03 17:33:21,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:33:39] 2025-06-03 17:33:21,385 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:33:39] 2025-06-03 17:33:21,385 | INFO     | update_server=False
[2025-06-03 13:33:39] 2025-06-03 17:33:21,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:33:39] 2025-06-03 17:33:21,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:33:39] 2025-06-03 17:33:21,386 | INFO     | aborting loop
[2025-06-03 13:33:39] 2025-06-03 17:33:21,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:33:39] 2025-06-03 17:33:21,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:33:39] 2025-06-03 17:33:21,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:33:39] 2025-06-03 17:33:21,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:33:39] 2025-06-03 17:33:22,091 | INFO     | all data control threads have been joined
[2025-06-03 13:33:39] 2025-06-03 17:33:22,198 | INFO     | all payload control threads have been joined
[2025-06-03 13:33:39] 2025-06-03 17:33:22,391 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:22,391 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:22,402 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:22,422 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:22,523 | INFO     | all job control threads have been joined
[2025-06-03 13:33:39] 2025-06-03 17:33:22,562 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,003 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,094 | INFO     | [data] control thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,204 | INFO     | [payload] control thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,409 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,528 | INFO     | [job] control thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:33:39] 2025-06-03 17:33:23,658 | INFO     | [job] validate thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,685 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:23,842 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:24,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:33:39] 2025-06-03 17:33:25,288 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:27,556 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:31,782 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:33:39] 2025-06-03 17:33:32,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:33:39] 2025-06-03 17:33:34,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328846464832)>', '<ExcThread(monitor, started 140327906170624)>']
[2025-06-03 13:33:39] 2025-06-03 17:33:34,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:33:39] 2025-06-03 17:33:34,617 | INFO     | [monitor] control thread has ended
[2025-06-03 13:33:39] 2025-06-03 17:33:39,112 | INFO     | all workflow threads have been joined
[2025-06-03 13:33:39] 2025-06-03 17:33:39,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:33:39] 2025-06-03 17:33:39,113 | INFO     | traces error code: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:39,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:33:39] 2025-06-03 17:33:39,226 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:33:39] 2025-06-03 17:33:39,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:33:39] 2025-06-03 17:33:39,231 [wrapper] pilotpid: 2796739
[2025-06-03 13:33:39] 2025-06-03 17:33:39,234 [wrapper] Pilot exit status: 0
[2025-06-03 13:33:39] 2025-06-03 17:33:39,243 [wrapper] pandaids: 6677635745
[2025-06-03 13:33:39] 2025-06-03 17:33:39,292 [wrapper] cleanup supervisor_pilot 2952772 2796740
[2025-06-03 13:33:39] 2025-06-03 17:33:39,295 [wrapper] Test setup, not cleaning
[2025-06-03 13:33:39] 2025-06-03 17:33:39,297 [wrapper] apfmon messages muted
[2025-06-03 13:33:39] 2025-06-03 17:33:39,300 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:33:39] 2025-06-03 17:33:39,302 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:33:39]  *** Error codes and diagnostics ***
[2025-06-03 13:33:39]     "exeErrorCode": 0,
[2025-06-03 13:33:39]     "exeErrorDiag": "",
[2025-06-03 13:33:39]     "pilotErrorCode": 0,
[2025-06-03 13:33:39]     "pilotErrorDiag": "",
[2025-06-03 13:33:39]  *** Listing of results directory ***
[2025-06-03 13:33:39] total 385572
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:39 queuedata.json
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 13:33:39] -rwx------. 1 boincer umatlas     37140 Jun  3 09:41 runpilot2-wrapper.sh
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:33:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:26 run_atlas
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:26 job.xml
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas 212914287 Jun  3 12:26 EVNT.45006593._001377.pool.root.1
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:26 start_atlas.sh
[2025-06-03 13:33:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:26 shared
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas    508888 Jun  3 12:26 input.tar.gz
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:26 boinc_lockfile
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:26 pandaJob.out
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas    983734 Jun  3 12:26 agis_schedconf.cvmfs.json
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:33:39] drwx------. 4 boincer umatlas      4096 Jun  3 12:26 pilot3
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas      6840 Jun  3 13:28 init_data.xml
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas        95 Jun  3 13:32 pilot_heartbeat.json
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas 176644545 Jun  3 13:32 HITS.45006595._034249.pool.root.1
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:32 boinc_task_state.xml
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas      1044 Jun  3 13:33 memory_monitor_summary.json
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas    310177 Jun  3 13:33 log.45006595._034249.job.log.tgz.1
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas      7711 Jun  3 13:33 heartbeat.json
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:33 boinc_mmap_file
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:33 wrapper_checkpoint.txt
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas      4425 Jun  3 13:33 pilotlog.txt
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas    405463 Jun  3 13:33 log.45006595._034249.job.log.1
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas       357 Jun  3 13:33 output.list
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:33 runtime_log
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas    737280 Jun  3 13:33 result.tar.gz
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas       652 Jun  3 13:33 v02MDmA4gg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTOkKDmLKhLIm.diag
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 13:33 runtime_log.err
[2025-06-03 13:33:39] -rw-r--r--. 1 boincer umatlas     21283 Jun  3 13:33 stderr.txt
[2025-06-03 13:33:39] HITS file was successfully produced:
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas 176644545 Jun  3 13:32 shared/HITS.pool.root.1
[2025-06-03 13:33:39]  *** Contents of shared directory: ***
[2025-06-03 13:33:39] total 381676
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas 212914287 Jun  3 12:26 ATLAS.root_0
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:26 start_atlas.sh
[2025-06-03 13:33:39] -rw-r--r--. 2 boincer umatlas    508888 Jun  3 12:26 input.tar.gz
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas 176644545 Jun  3 13:32 HITS.pool.root.1
[2025-06-03 13:33:39] -rw-------. 1 boincer umatlas    737280 Jun  3 13:33 result.tar.gz
13:33:40 (2793078): run_atlas exited; CPU time 27067.394457
13:33:40 (2793078): called boinc_finish(0)

</stderr_txt>
]]>

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