Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:32 (25647): wrapper (7.7.26015): starting
12:27:32 (25647): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 12:27:32] Arguments: --nthreads 4
[2025-06-03 12:27:32] Threads: 4
[2025-06-03 12:27:32] Checking for CVMFS
[2025-06-03 12:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:27:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:27:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:27:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:27:32] 2.11.2.0 2810 34481 73948 146749 2 61 14613219 20275201 1 130560 0 11716689 99.981 6288046 7670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 12:27:32] CVMFS is ok
[2025-06-03 12:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:27:32] Further information can be found at the LHC@home message board.
[2025-06-03 12:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:27:32] Checking for apptainer binary...
[2025-06-03 12:27:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:27:32] Running /usr/bin/apptainer --version
[2025-06-03 12:27:32] apptainer version 1.3.2-1.el7
[2025-06-03 12:27:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:27:33] c-204-37.aglt2.org
[2025-06-03 12:27:33] apptainer works
[2025-06-03 12:27:33] Set ATHENA_PROC_NUMBER=4
[2025-06-03 12:27:33] Set ATHENA_CORE_NUMBER=4
[2025-06-03 12:27:33] Starting ATLAS job with PandaID=6677635696
[2025-06-03 12:27:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:55:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:55:21] 2025-06-03 19:55:08,392 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 15:55:21] 2025-06-03 19:55:08,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677635696/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,394 | INFO     | extracted standard info from prmon json
[2025-06-03 15:55:21] 2025-06-03 19:55:08,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:55:21] 2025-06-03 19:55:08,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:55:21] 2025-06-03 19:55:08,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:55:21] 2025-06-03 19:55:08,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:55:21] 2025-06-03 19:55:08,400 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:55:21] 2025-06-03 19:55:08,400 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,402 | INFO     | sum of deviations: -44861295087.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,402 | INFO     | mean x: 1748974281.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,402 | INFO     | mean y: 2346103.1764705884
[2025-06-03 15:55:21] 2025-06-03 19:55:08,402 | INFO     | -- intersect: 29807868623.211708
[2025-06-03 15:55:21] 2025-06-03 19:55:08,402 | INFO     | intersect: 29807868623.211708
[2025-06-03 15:55:21] 2025-06-03 19:55:08,403 | INFO     | chi2: 2.2891980776234355
[2025-06-03 15:55:21] 2025-06-03 19:55:08,403 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | sum of deviations: -31177037109.000004
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | mean x: 1748974129.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | mean y: 2356954.8291457286
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | -- intersect: 22317081949.388958
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | intersect: 22317081949.388958
[2025-06-03 15:55:21] 2025-06-03 19:55:08,405 | INFO     | chi2: 1.532961905467044
[2025-06-03 15:55:21] 2025-06-03 19:55:08,406 | INFO     | current chi2=1.532961905467044 (change=33.03498196807369 %)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,406 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,407 | INFO     | sum of deviations: -30072778813.999992
[2025-06-03 15:55:21] 2025-06-03 19:55:08,407 | INFO     | mean x: 1748973976.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | mean y: 2357892.680412371
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | -- intersect: 23234263438.592728
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | intersect: 23234263438.592728
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | chi2: 1.5290587605256178
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | current chi2=1.5290587605256178 (change=0.25461460767591754 %)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,408 | INFO     | right removable region: 193
[2025-06-03 15:55:21] 2025-06-03 19:55:08,409 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,410 | INFO     | sum of deviations: -68416306982.99999
[2025-06-03 15:55:21] 2025-06-03 19:55:08,410 | INFO     | mean x: 1748974434.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,410 | INFO     | mean y: 2364846.7386934673
[2025-06-03 15:55:21] 2025-06-03 19:55:08,410 | INFO     | -- intersect: 48970819942.96803
[2025-06-03 15:55:21] 2025-06-03 19:55:08,411 | INFO     | intersect: 48970819942.96803
[2025-06-03 15:55:21] 2025-06-03 19:55:08,411 | INFO     | chi2: 1.0119275327221238
[2025-06-03 15:55:21] 2025-06-03 19:55:08,411 | INFO     | current chi2=1.0119275327221238 (change=55.79554505948777 %)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,411 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,413 | INFO     | sum of deviations: -63394800372.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,413 | INFO     | mean x: 1748974586.5
[2025-06-03 15:55:21] 2025-06-03 19:55:08,413 | INFO     | mean y: 2360565.7268041237
[2025-06-03 15:55:21] 2025-06-03 19:55:08,413 | INFO     | -- intersect: 48976302652.55344
[2025-06-03 15:55:21] 2025-06-03 19:55:08,413 | INFO     | intersect: 48976302652.55344
[2025-06-03 15:55:21] 2025-06-03 19:55:08,414 | INFO     | chi2: 1.0093057959560403
[2025-06-03 15:55:21] 2025-06-03 19:55:08,414 | INFO     | current chi2=1.0093057959560403 (change=0.2590834502774016 %)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,414 | INFO     | left removable region: 20
[2025-06-03 15:55:21] 2025-06-03 19:55:08,414 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,415 | INFO     | sum of deviations: -36339447467.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,415 | INFO     | mean x: 1748974556.0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,415 | INFO     | mean y: 2361831.9537572255
[2025-06-03 15:55:21] 2025-06-03 19:55:08,416 | INFO     | -- intersect: 39589999695.59654
[2025-06-03 15:55:21] 2025-06-03 19:55:08,416 | INFO     | intersect: 39589999695.59654
[2025-06-03 15:55:21] 2025-06-03 19:55:08,416 | INFO     | chi2: 0.2091316468372977
[2025-06-03 15:55:21] 2025-06-03 19:55:08,416 | INFO     | -- intersect: 39589999695.59654
[2025-06-03 15:55:21] 2025-06-03 19:55:08,416 | INFO     | current memory leak: -22.63 B/s (using 173 data points, chi2=0.21)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | ..............................
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | . Timing measurements:
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | . get job = 0 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | . initial setup = 2 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | . payload setup = 6 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,417 | INFO     | . stage-in = 0 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,418 | INFO     | . payload execution = 12402 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,418 | INFO     | . stage-out = 2 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,418 | INFO     | . log creation = 0 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,418 | INFO     | ..............................
[2025-06-03 15:55:21] 2025-06-03 19:55:08,516 | INFO     | 
[2025-06-03 15:55:21] 2025-06-03 19:55:08,516 | INFO     | job summary report
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | --------------------------------------------------
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | PanDA job id: 6677635696
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | task id: 45006595
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | errors: (none)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:55:21] 2025-06-03 19:55:08,517 | INFO     | pilot state: finished 
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | transexitcode: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | exeerrorcode: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | exeerrordiag: 
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | exitcode: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | exitmsg: OK
[2025-06-03 15:55:21] 2025-06-03 19:55:08,518 | INFO     | cpuconsumptiontime: 47874 s
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | nevents: 400
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | neventsw: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | pid: 3508
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | pgrp: 3508
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | corecount: 4
[2025-06-03 15:55:21] 2025-06-03 19:55:08,519 | INFO     | event service: False
[2025-06-03 15:55:21] 2025-06-03 19:55:08,520 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 12413: 2435234, 12417: 2444175, 12420: 2444231, 12430: 2444529}
[2025-06-03 15:55:21] 2025-06-03 19:55:08,520 | INFO     | --------------------------------------------------
[2025-06-03 15:55:21] 2025-06-03 19:55:08,520 | INFO     | 
[2025-06-03 15:55:21] 2025-06-03 19:55:08,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 15:55:21] 2025-06-03 19:55:08,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,551 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:55:21] 2025-06-03 19:55:08,551 | INFO     | job 6677635696 has completed (purged errors)
[2025-06-03 15:55:21] 2025-06-03 19:55:08,552 | INFO     | overall cleanup function is called
[2025-06-03 15:55:21] 2025-06-03 19:55:09,560 | INFO     | --- collectZombieJob: --- 10, [3508]
[2025-06-03 15:55:21] 2025-06-03 19:55:09,560 | INFO     | zombie collector waiting for pid 3508
[2025-06-03 15:55:21] 2025-06-03 19:55:09,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:55:21] 2025-06-03 19:55:09,560 | INFO     | collected zombie processes
[2025-06-03 15:55:21] 2025-06-03 19:55:09,561 | INFO     | will attempt to kill all subprocesses of pid=3508
[2025-06-03 15:55:21] 2025-06-03 19:55:09,650 | INFO     | process IDs to be killed: [3508] (in reverse order)
[2025-06-03 15:55:21] 2025-06-03 19:55:09,707 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:55:21] 2025-06-03 19:55:09,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:55:21] 2025-06-03 19:55:09,712 | INFO     | did not find any defunct processes belonging to 3508
[2025-06-03 15:55:21] 2025-06-03 19:55:09,716 | INFO     | did not find any defunct processes belonging to 3508
[2025-06-03 15:55:21] 2025-06-03 19:55:09,716 | INFO     | ready for new job
[2025-06-03 15:55:21] 2025-06-03 19:55:09,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:55:21] 2025-06-03 19:55:09,718 | INFO     | **************************************
[2025-06-03 15:55:21] 2025-06-03 19:55:09,718 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:55:21] 2025-06-03 19:55:09,719 | INFO     | **************************************
[2025-06-03 15:55:21] 2025-06-03 19:55:09,719 | INFO     | 
[2025-06-03 15:55:21] 2025-06-03 19:55:09,719 | INFO     | architecture information:
[2025-06-03 15:55:21] 2025-06-03 19:55:09,720 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:55:21] 2025-06-03 19:55:09,737 | INFO     | cat /etc/os-release:
[2025-06-03 15:55:21] NAME="CentOS Linux"
[2025-06-03 15:55:21] VERSION="7 (Core)"
[2025-06-03 15:55:21] ID="centos"
[2025-06-03 15:55:21] ID_LIKE="rhel fedora"
[2025-06-03 15:55:21] VERSION_ID="7"
[2025-06-03 15:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:55:21] ANSI_COLOR="0;31"
[2025-06-03 15:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:55:21] HOME_URL="https://www.centos.org/"
[2025-06-03 15:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:55:21] 
[2025-06-03 15:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:55:21] 
[2025-06-03 15:55:21] 2025-06-03 19:55:09,737 | INFO     | **************************************
[2025-06-03 15:55:21] 2025-06-03 19:55:10,239 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 15:55:21] 2025-06-03 19:55:10,260 | INFO     | sufficient remaining disk space (18611175424 B)
[2025-06-03 15:55:21] 2025-06-03 19:55:10,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:55:21] 2025-06-03 19:55:10,261 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:55:21] 2025-06-03 19:55:10,261 | INFO     | update_server=False
[2025-06-03 15:55:21] 2025-06-03 19:55:10,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:55:21] 2025-06-03 19:55:10,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:55:21] 2025-06-03 19:55:10,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:55:21] 2025-06-03 19:55:10,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:55:21] 2025-06-03 19:55:10,263 | INFO     | aborting loop
[2025-06-03 15:55:21] 2025-06-03 19:55:10,368 | INFO     | all job control threads have been joined
[2025-06-03 15:55:21] 2025-06-03 19:55:10,549 | INFO     | all payload control threads have been joined
[2025-06-03 15:55:21] 2025-06-03 19:55:10,964 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:55:21] 2025-06-03 19:55:10,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:55:21] 2025-06-03 19:55:10,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:55:21] 2025-06-03 19:55:11,162 | INFO     | all data control threads have been joined
[2025-06-03 15:55:21] 2025-06-03 19:55:11,266 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,268 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,268 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,325 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,334 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,374 | INFO     | [job] control thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,555 | INFO     | [payload] control thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,568 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:11,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:55:21] 2025-06-03 19:55:12,168 | INFO     | [data] control thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:12,231 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:12,438 | INFO     | [job] validate thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:12,438 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:12,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:12,644 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:13,759 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:14,269 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:55:21] 2025-06-03 19:55:16,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692925912896)>', '<ExcThread(monitor, started 140692617668352)>']
[2025-06-03 15:55:21] 2025-06-03 19:55:16,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:55:21] 2025-06-03 19:55:16,988 | INFO     | [monitor] control thread has ended
[2025-06-03 15:55:21] 2025-06-03 19:55:21,131 | INFO     | all workflow threads have been joined
[2025-06-03 15:55:21] 2025-06-03 19:55:21,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:55:21] 2025-06-03 19:55:21,132 | INFO     | traces error code: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:21,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:55:21] 2025-06-03 19:55:21,244 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:55:21] 2025-06-03 19:55:21,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:55:21] 2025-06-03 19:55:21,253 [wrapper] pilotpid: 29224
[2025-06-03 15:55:21] 2025-06-03 19:55:21,258 [wrapper] Pilot exit status: 0
[2025-06-03 15:55:21] 2025-06-03 19:55:21,290 [wrapper] pandaids: 6677635696
[2025-06-03 15:55:21] 2025-06-03 19:55:21,335 [wrapper] cleanup supervisor_pilot  6809 29225
[2025-06-03 15:55:21] 2025-06-03 19:55:21,340 [wrapper] Test setup, not cleaning
[2025-06-03 15:55:21] 2025-06-03 19:55:21,345 [wrapper] apfmon messages muted
[2025-06-03 15:55:21] 2025-06-03 19:55:21,349 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:55:21] 2025-06-03 19:55:21,353 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:55:21]  *** Error codes and diagnostics ***
[2025-06-03 15:55:21]     "exeErrorCode": 0,
[2025-06-03 15:55:21]     "exeErrorDiag": "",
[2025-06-03 15:55:21]     "pilotErrorCode": 0,
[2025-06-03 15:55:21]     "pilotErrorDiag": "",
[2025-06-03 15:55:21]  *** Listing of results directory ***
[2025-06-03 15:55:21] total 387704
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 09:35 queuedata.json
[2025-06-03 15:55:21] -rwx------ 1 boincer umatlas     37140 Jun  3 09:36 runpilot2-wrapper.sh
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas       100 Jun  3 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:55:21] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 12:27 run_atlas
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas       105 Jun  3 12:27 job.xml
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas 214633619 Jun  3 12:27 EVNT.45006593._001375.pool.root.1
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 12:27 start_atlas.sh
[2025-06-03 15:55:21] drwxrwx--x 2 boincer umatlas      4096 Jun  3 12:27 shared
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 12:27 input.tar.gz
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas         0 Jun  3 12:27 boinc_lockfile
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 12:27 pandaJob.out
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas    983734 Jun  3 12:27 agis_schedconf.cvmfs.json
[2025-06-03 15:55:21] drwx------ 4 boincer umatlas      4096 Jun  3 12:27 pilot3
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas 175628696 Jun  3 15:54 HITS.45006595._034200.pool.root.1
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas        95 Jun  3 15:54 pilot_heartbeat.json
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas      5906 Jun  3 15:54 init_data.xml
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas       530 Jun  3 15:54 boinc_task_state.xml
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas      1061 Jun  3 15:54 memory_monitor_summary.json
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas   1603667 Jun  3 15:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas    331796 Jun  3 15:54 log.45006595._034200.job.log.tgz.1
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas      7763 Jun  3 15:55 heartbeat.json
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 15:55 boinc_mmap_file
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas        28 Jun  3 15:55 wrapper_checkpoint.txt
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas      4353 Jun  3 15:55 pilotlog.txt
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas   1120584 Jun  3 15:55 log.45006595._034200.job.log.1
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas       357 Jun  3 15:55 output.list
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas       620 Jun  3 15:55 runtime_log
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas   1474560 Jun  3 15:55 result.tar.gz
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas      8660 Jun  3 15:55 runtime_log.err
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas       662 Jun  3 15:55 dnbKDmZzgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeNkKDmpLUMhm.diag
[2025-06-03 15:55:21] -rw-r--r-- 1 boincer umatlas     20764 Jun  3 15:55 stderr.txt
[2025-06-03 15:55:21] HITS file was successfully produced:
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas 175628696 Jun  3 15:54 shared/HITS.pool.root.1
[2025-06-03 15:55:21]  *** Contents of shared directory: ***
[2025-06-03 15:55:21] total 383084
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas 214633619 Jun  3 12:27 ATLAS.root_0
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 12:27 start_atlas.sh
[2025-06-03 15:55:21] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 12:27 input.tar.gz
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas 175628696 Jun  3 15:54 HITS.pool.root.1
[2025-06-03 15:55:21] -rw------- 1 boincer umatlas   1474560 Jun  3 15:55 result.tar.gz
15:55:23 (25647): run_atlas exited; CPU time 47615.029300
15:55:23 (25647): called boinc_finish(0)

</stderr_txt>
]]>

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