Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:47:48 (2768185): wrapper (7.7.26015): starting
03:47:48 (2768185): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 03:47:48] Arguments: --nthreads 3
[2025-06-04 03:47:48] Threads: 3
[2025-06-04 03:47:48] Checking for CVMFS
[2025-06-04 03:47:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:47:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:47:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:47:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:47:48] 2.9.2.0 2190426 1983 65052 146762 2 61 31875403 36864001 0 130560 0 1544037 99.992 447764 36477 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 03:47:48] CVMFS is ok
[2025-06-04 03:47:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:47:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:47:48] Further information can be found at the LHC@home message board.
[2025-06-04 03:47:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:47:48] Checking for apptainer binary...
[2025-06-04 03:47:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:47:48] Running /usr/bin/apptainer --version
[2025-06-04 03:47:48] apptainer version 1.3.6-6.1
[2025-06-04 03:47:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:47:48] thA312
[2025-06-04 03:47:48] apptainer works
[2025-06-04 03:47:48] Set ATHENA_PROC_NUMBER=3
[2025-06-04 03:47:48] Set ATHENA_CORE_NUMBER=3
[2025-06-04 03:47:48] Starting ATLAS job with PandaID=6677676619
[2025-06-04 03:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:09:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:09:30]  mtime=0
[2025-06-04 05:09:30]  protocol_id=None
[2025-06-04 05:09:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:09:30]  replicas=None
[2025-06-04 05:09:30]  scope=mc23_13p6TeV
[2025-06-04 05:09:30]  status=None
[2025-06-04 05:09:30]  status_code=0
[2025-06-04 05:09:30]  storage_token=
[2025-06-04 05:09:30]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677676619/log.45006595._036709.job.log.tgz.1
[2025-06-04 05:09:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/0c/log.45006595._036709.job.log.tgz.1
[2025-06-04 05:09:30]  workdir=None
[2025-06-04 05:09:30] ]
[2025-06-04 05:09:30] 2025-06-04 03:09:02,389 | INFO     | transferring file log.45006595._036709.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677676619/log.45006595._036709.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 05:09:30] 2025-06-04 03:09:02,389 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677676619/log.45006595._036709.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0367
[2025-06-04 05:09:30] 2025-06-04 03:09:02,401 | INFO     | adding to output.list: log.45006595._036709.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/0c/log.45006595._036709.job.log.tg
[2025-06-04 05:09:30] 2025-06-04 03:09:02,402 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:09:30] 2025-06-04 03:09:02,402 | INFO     | summary of transferred files:
[2025-06-04 05:09:30] 2025-06-04 03:09:02,402 | INFO     |  -- lfn=log.45006595._036709.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:09:30] 2025-06-04 03:09:02,402 | INFO     | stage-out finished correctly
[2025-06-04 05:09:30] 2025-06-04 03:09:03,392 | WARNING  | process 2778322 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 05:09:30] 2025-06-04 03:09:03,392 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677676619/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:09:30] 2025-06-04 03:09:03,409 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:09:30] 2025-06-04 03:09:03,441 | INFO     | job 6677676619 has state=finished
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | preparing for final server update for job 6677676619 in state='finished'
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | job 6677676619 has finished - writing final server update
[2025-06-04 05:09:30] 2025-06-04 03:09:03,442 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:09:30] 2025-06-04 03:09:03,443 | INFO     | executing command: lscpu
[2025-06-04 05:09:30] 2025-06-04 03:09:03,458 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:09:30] 2025-06-04 03:09:03,499 | INFO     | number of running child processes to parent process 2778322: 1
[2025-06-04 05:09:30] 2025-06-04 03:09:03,499 | INFO     | maximum number of monitored processes: 6
[2025-06-04 05:09:30] 2025-06-04 03:09:03,561 | INFO     | PID=2771825 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:09:30] 2025-06-04 03:09:06,003 | INFO     | monitor loop #375: job 0:6677676619 is in state 'finished'
[2025-06-04 05:09:30] 2025-06-04 03:09:06,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:09:30] 2025-06-04 03:09:08,506 | INFO     | monitor loop #376: job 0:6677676619 is in state 'finished'
[2025-06-04 05:09:30] 2025-06-04 03:09:08,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,011 | INFO     | monitor loop #377: job 0:6677676619 is in state 'finished'
[2025-06-04 05:09:30] 2025-06-04 03:09:11,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,096 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677676619/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | INFO     | extracted standard info from prmon json
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:09:30] 2025-06-04 03:09:11,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | sum of deviations: -2541713108.0000005
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | mean x: 1749004205.0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | mean y: 2453810.7397260275
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | -- intersect: 36862161095.60222
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | intersect: 36862161095.60222
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | chi2: 0.02855819765073457
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | -- intersect: 36862161095.60222
[2025-06-04 05:09:30] 2025-06-04 03:09:11,098 | INFO     | current memory leak: -21.07 B/s (using 73 data points, chi2=0.03)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | ..............................
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . Timing measurements:
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . get job = 0 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . initial setup = 1 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . payload setup = 7 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . stage-in = 0 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . payload execution = 4837 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . stage-out = 0 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | . log creation = 0 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,099 | INFO     | ..............................
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | 
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | job summary report
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | --------------------------------------------------
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | PanDA job id: 6677676619
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | task id: 45006595
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | errors: (none)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | pilot state: finished 
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | transexitcode: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,131 | INFO     | exeerrorcode: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | exeerrordiag: 
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | exitcode: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | exitmsg: OK
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | cpuconsumptiontime: 13866 s
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | nevents: 400
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | neventsw: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | pid: 2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | pgrp: 2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | corecount: 3
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | event service: False
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | sizes: {0: 2404960, 1: 2405215, 6: 2405421, 11: 2405449, 4848: 2440591, 4849: 2440591, 4857: 2440889}
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | --------------------------------------------------
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | 
[2025-06-04 05:09:30] 2025-06-04 03:09:11,132 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,144 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:09:30] 2025-06-04 03:09:11,145 | INFO     | job 6677676619 has completed (purged errors)
[2025-06-04 05:09:30] 2025-06-04 03:09:11,145 | INFO     | overall cleanup function is called
[2025-06-04 05:09:30] 2025-06-04 03:09:12,151 | INFO     | --- collectZombieJob: --- 10, [2778322]
[2025-06-04 05:09:30] 2025-06-04 03:09:12,151 | INFO     | zombie collector waiting for pid 2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:12,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:09:30] 2025-06-04 03:09:12,151 | INFO     | collected zombie processes
[2025-06-04 05:09:30] 2025-06-04 03:09:12,151 | INFO     | will attempt to kill all subprocesses of pid=2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:12,194 | INFO     | process IDs to be killed: [2778322] (in reverse order)
[2025-06-04 05:09:30] 2025-06-04 03:09:12,221 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:09:30] 2025-06-04 03:09:12,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:09:30] 2025-06-04 03:09:12,223 | INFO     | did not find any defunct processes belonging to 2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:12,224 | INFO     | did not find any defunct processes belonging to 2778322
[2025-06-04 05:09:30] 2025-06-04 03:09:12,224 | INFO     | ready for new job
[2025-06-04 05:09:30] 2025-06-04 03:09:12,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | **************************************
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | **************************************
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | 
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | architecture information:
[2025-06-04 05:09:30] 2025-06-04 03:09:12,225 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:09:30] 2025-06-04 03:09:12,234 | INFO     | cat /etc/os-release:
[2025-06-04 05:09:30] NAME="CentOS Linux"
[2025-06-04 05:09:30] VERSION="7 (Core)"
[2025-06-04 05:09:30] ID="centos"
[2025-06-04 05:09:30] ID_LIKE="rhel fedora"
[2025-06-04 05:09:30] VERSION_ID="7"
[2025-06-04 05:09:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:09:30] ANSI_COLOR="0;31"
[2025-06-04 05:09:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:09:30] HOME_URL="https://www.centos.org/"
[2025-06-04 05:09:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:09:30] 
[2025-06-04 05:09:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:09:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:09:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:09:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:09:30] 
[2025-06-04 05:09:30] 2025-06-04 03:09:12,234 | INFO     | **************************************
[2025-06-04 05:09:30] 2025-06-04 03:09:12,738 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | INFO     | sufficient remaining disk space (825370869760 B)
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | INFO     | update_server=False
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | INFO     | aborting loop
[2025-06-04 05:09:30] 2025-06-04 03:09:12,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:09:30] 2025-06-04 03:09:12,900 | INFO     | all payload control threads have been joined
[2025-06-04 05:09:30] 2025-06-04 03:09:12,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:09:30] 2025-06-04 03:09:13,587 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:09:30] 2025-06-04 03:09:13,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:09:30] 2025-06-04 03:09:13,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:09:30] 2025-06-04 03:09:13,608 | INFO     | all data control threads have been joined
[2025-06-04 05:09:30] 2025-06-04 03:09:13,758 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,759 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,759 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,768 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,798 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,906 | INFO     | [payload] control thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:13,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:09:30] 2025-06-04 03:09:14,144 | INFO     | all job control threads have been joined
[2025-06-04 05:09:30] 2025-06-04 03:09:14,334 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:14,440 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:14,614 | INFO     | [data] control thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:14,954 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:14,960 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:14,994 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:15,011 | INFO     | [job] validate thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:15,150 | INFO     | [job] control thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:17,958 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:23,091 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:09:30] 2025-06-04 03:09:24,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:09:30] 2025-06-04 03:09:25,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685618284352)>', '<ExcThread(monitor, started 139684592207616)>']
[2025-06-04 05:09:30] 2025-06-04 03:09:25,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:09:30] 2025-06-04 03:09:25,652 | INFO     | [monitor] control thread has ended
[2025-06-04 05:09:30] 2025-06-04 03:09:30,554 | INFO     | all workflow threads have been joined
[2025-06-04 05:09:30] 2025-06-04 03:09:30,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:09:30] 2025-06-04 03:09:30,555 | INFO     | traces error code: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:30,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:09:30] 2025-06-04 03:09:30,605 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:09:30] 2025-06-04 03:09:30,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:09:30] 2025-06-04 03:09:30,611 [wrapper] pilotpid: 2771825
[2025-06-04 05:09:30] 2025-06-04 03:09:30,613 [wrapper] Pilot exit status: 0
[2025-06-04 05:09:30] 2025-06-04 03:09:30,621 [wrapper] pandaids: 6677676619
[2025-06-04 05:09:30] 2025-06-04 03:09:30,639 [wrapper] cleanup supervisor_pilot 2790380 2771826
[2025-06-04 05:09:30] 2025-06-04 03:09:30,642 [wrapper] Test setup, not cleaning
[2025-06-04 05:09:30] 2025-06-04 03:09:30,645 [wrapper] apfmon messages muted
[2025-06-04 05:09:30] 2025-06-04 03:09:30,647 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:09:30] 2025-06-04 03:09:30,650 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:09:30]  *** Error codes and diagnostics ***
[2025-06-04 05:09:30]     "exeErrorCode": 0,
[2025-06-04 05:09:30]     "exeErrorDiag": "",
[2025-06-04 05:09:30]     "pilotErrorCode": 0,
[2025-06-04 05:09:30]     "pilotErrorDiag": "",
[2025-06-04 05:09:30]  *** Listing of results directory ***
[2025-06-04 05:09:30] total 387464
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:52 pilot3.tar.gz
[2025-06-04 05:09:30] -rwx------ 1 boinc boinc     37140 Jun  3 17:15 runpilot2-wrapper.sh
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:15 queuedata.json
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:09:30] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:47 run_atlas
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:47 job.xml
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc 215833638 Jun  4 03:47 EVNT.45006593._001475.pool.root.1
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc      6679 Jun  4 03:47 init_data.xml
[2025-06-04 05:09:30] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:47 shared
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc    508878 Jun  4 03:47 input.tar.gz
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:47 start_atlas.sh
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:47 boinc_lockfile
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc      2525 Jun  4 03:47 pandaJob.out
[2025-06-04 05:09:30] -rw------- 1 boinc boinc    986069 Jun  4 03:47 agis_schedconf.cvmfs.json
[2025-06-04 05:09:30] -rw------- 1 boinc boinc   1603667 Jun  4 03:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:09:30] drwx------ 4 boinc boinc      4096 Jun  4 03:47 pilot3
[2025-06-04 05:09:30] -rw------- 1 boinc boinc        95 Jun  4 05:08 pilot_heartbeat.json
[2025-06-04 05:09:30] -rw------- 1 boinc boinc 175705994 Jun  4 05:08 HITS.45006595._036709.pool.root.1
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:08 boinc_task_state.xml
[2025-06-04 05:09:30] -rw------- 1 boinc boinc      1016 Jun  4 05:08 memory_monitor_summary.json
[2025-06-04 05:09:30] -rw------- 1 boinc boinc    224416 Jun  4 05:09 log.45006595._036709.job.log.tgz.1
[2025-06-04 05:09:30] -rw------- 1 boinc boinc      7646 Jun  4 05:09 heartbeat.json
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:09 boinc_mmap_file
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc        27 Jun  4 05:09 wrapper_checkpoint.txt
[2025-06-04 05:09:30] -rw------- 1 boinc boinc      4429 Jun  4 05:09 pilotlog.txt
[2025-06-04 05:09:30] -rw------- 1 boinc boinc    473748 Jun  4 05:09 log.45006595._036709.job.log.1
[2025-06-04 05:09:30] -rw------- 1 boinc boinc       357 Jun  4 05:09 output.list
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:09 runtime_log
[2025-06-04 05:09:30] -rw------- 1 boinc boinc    716800 Jun  4 05:09 result.tar.gz
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc      8733 Jun  4 05:09 runtime_log.err
[2025-06-04 05:09:30] -rw------- 1 boinc boinc       658 Jun  4 05:09 UndKDmIXig7n9Rq4apOajLDm4fhM0noT9bVof3QYDme2YKDmkyKinm.diag
[2025-06-04 05:09:30] -rw-r--r-- 1 boinc boinc     21731 Jun  4 05:09 stderr.txt
[2025-06-04 05:09:30] HITS file was successfully produced:
[2025-06-04 05:09:30] -rw------- 1 boinc boinc 175705994 Jun  4 05:08 shared/HITS.pool.root.1
[2025-06-04 05:09:30]  *** Contents of shared directory: ***
[2025-06-04 05:09:30] total 383584
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc 215833638 Jun  4 03:47 ATLAS.root_0
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc    508878 Jun  4 03:47 input.tar.gz
[2025-06-04 05:09:30] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:47 start_atlas.sh
[2025-06-04 05:09:30] -rw------- 1 boinc boinc 175705994 Jun  4 05:08 HITS.pool.root.1
[2025-06-04 05:09:30] -rw------- 1 boinc boinc    716800 Jun  4 05:09 result.tar.gz
05:09:31 (2768185): run_atlas exited; CPU time 13893.465419
05:09:31 (2768185): called boinc_finish(0)

</stderr_txt>
]]>

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