Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:33 (6672): wrapper (7.7.26015): starting
02:09:33 (6672): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:09:33] Arguments: --nthreads 8
[2025-06-04 02:09:33] Threads: 8
[2025-06-04 02:09:33] Checking for CVMFS
[2025-06-04 02:09:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:09:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:09:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:09:36] 2.11.2.0 1205 32457 91996 146761 2 257 19424803 25165825 2733 130560 0 16497906 99.792 18823688 2198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:09:36] CVMFS is ok
[2025-06-04 02:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:09:36] Checking for apptainer binary...
[2025-06-04 02:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:09:36] Running /usr/bin/apptainer --version
[2025-06-04 02:09:36] apptainer version 1.3.2-1.el7
[2025-06-04 02:09:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:20:02] cg-vwn325.simple-grid.lan
[2025-06-04 02:20:02] apptainer works
[2025-06-04 02:20:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:20:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:20:02] Starting ATLAS job with PandaID=6677635666
[2025-06-04 02:20:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:58:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:58:35] 2025-06-04 04:24:31,447 | INFO     | extracted standard info from prmon json
[2025-06-04 06:58:35] 2025-06-04 04:24:31,448 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:58:35] 2025-06-04 04:24:31,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:58:35] 2025-06-04 04:24:31,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:58:35] 2025-06-04 04:24:31,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:58:35] 2025-06-04 04:24:31,454 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:58:35] 2025-06-04 04:24:31,454 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,456 | INFO     | sum of deviations: -586293204.0000095
[2025-06-04 06:58:35] 2025-06-04 04:24:31,457 | INFO     | mean x: 1749003996.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,457 | INFO     | mean y: 2504415.8384279474
[2025-06-04 06:58:35] 2025-06-04 04:24:31,457 | INFO     | -- intersect: 277882308.7145107
[2025-06-04 06:58:35] 2025-06-04 04:24:31,457 | INFO     | intersect: 277882308.7145107
[2025-06-04 06:58:35] 2025-06-04 04:24:31,457 | INFO     | chi2: 6.1030993579197785
[2025-06-04 06:58:35] 2025-06-04 04:24:31,458 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,460 | INFO     | sum of deviations: 15439115554.999968
[2025-06-04 06:58:35] 2025-06-04 04:24:31,460 | INFO     | mean x: 1749003843.5
[2025-06-04 06:58:35] 2025-06-04 04:24:31,460 | INFO     | mean y: 2514487.1696428573
[2025-06-04 06:58:35] 2025-06-04 04:24:31,460 | INFO     | -- intersect: -7745659388.793103
[2025-06-04 06:58:35] 2025-06-04 04:24:31,460 | INFO     | intersect: -7745659388.793103
[2025-06-04 06:58:35] 2025-06-04 04:24:31,461 | INFO     | chi2: 5.385368458235509
[2025-06-04 06:58:35] 2025-06-04 04:24:31,461 | INFO     | current chi2=5.385368458235509 (change=11.760105113689415 %)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,461 | INFO     | right removable region: 223
[2025-06-04 06:58:35] 2025-06-04 04:24:31,461 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,463 | INFO     | sum of deviations: -80323023039.49998
[2025-06-04 06:58:35] 2025-06-04 04:24:31,463 | INFO     | mean x: 1749004148.5
[2025-06-04 06:58:35] 2025-06-04 04:24:31,463 | INFO     | mean y: 2555311.995535714
[2025-06-04 06:58:35] 2025-06-04 04:24:31,464 | INFO     | -- intersect: 40312951012.16412
[2025-06-04 06:58:35] 2025-06-04 04:24:31,464 | INFO     | intersect: 40312951012.16412
[2025-06-04 06:58:35] 2025-06-04 04:24:31,464 | INFO     | chi2: 1.4782947921824385
[2025-06-04 06:58:35] 2025-06-04 04:24:31,464 | INFO     | current chi2=1.4782947921824385 (change=75.77796615314631 %)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,465 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,467 | INFO     | sum of deviations: -99061429643.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,467 | INFO     | mean x: 1749004301.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,467 | INFO     | mean y: 2567717.634703196
[2025-06-04 06:58:35] 2025-06-04 04:24:31,467 | INFO     | -- intersect: 53200377911.46845
[2025-06-04 06:58:35] 2025-06-04 04:24:31,467 | INFO     | intersect: 53200377911.46845
[2025-06-04 06:58:35] 2025-06-04 04:24:31,468 | INFO     | chi2: 0.9932921017048928
[2025-06-04 06:58:35] 2025-06-04 04:24:31,468 | INFO     | current chi2=0.9932921017048928 (change=32.8082526599127 %)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,468 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:58:35] 2025-06-04 04:24:31,470 | INFO     | sum of deviations: -94597614434.50002
[2025-06-04 06:58:35] 2025-06-04 04:24:31,470 | INFO     | mean x: 1749004453.5
[2025-06-04 06:58:35] 2025-06-04 04:24:31,470 | INFO     | mean y: 2564589.7429906544
[2025-06-04 06:58:35] 2025-06-04 04:24:31,471 | INFO     | -- intersect: 54447920248.609764
[2025-06-04 06:58:35] 2025-06-04 04:24:31,471 | INFO     | intersect: 54447920248.609764
[2025-06-04 06:58:35] 2025-06-04 04:24:31,471 | INFO     | chi2: 0.9921757276629957
[2025-06-04 06:58:35] 2025-06-04 04:24:31,471 | INFO     | current chi2=0.9921757276629957 (change=0.11239131369120689 %)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,471 | INFO     | left removable region: 30
[2025-06-04 06:58:35] 2025-06-04 04:24:31,472 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,473 | INFO     | sum of deviations: -61092323316.99999
[2025-06-04 06:58:35] 2025-06-04 04:24:31,473 | INFO     | mean x: 1749004728.0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | mean y: 2564108.6062176167
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | -- intersect: 47936041148.96453
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | intersect: 47936041148.96453
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | chi2: 0.1965219439227272
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | -- intersect: 47936041148.96453
[2025-06-04 06:58:35] 2025-06-04 04:24:31,474 | INFO     | current memory leak: -27.41 B/s (using 193 data points, chi2=0.20)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,475 | INFO     | ..............................
[2025-06-04 06:58:35] 2025-06-04 04:24:31,475 | INFO     | . Timing measurements:
[2025-06-04 06:58:35] 2025-06-04 04:24:31,475 | INFO     | . get job = 0 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . initial setup = 9 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . payload setup = 138 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . stage-in = 0 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . payload execution = 14063 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . stage-out = 3 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | . log creation = 1 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,476 | INFO     | ..............................
[2025-06-04 06:58:35] 2025-06-04 04:24:31,627 | INFO     | 
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | job summary report
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | --------------------------------------------------
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | PanDA job id: 6677635666
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | task id: 45006595
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | errors: (none)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | pilot state: finished 
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | transexitcode: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | exeerrorcode: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,628 | INFO     | exeerrordiag: 
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | exitcode: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | exitmsg: OK
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | cpuconsumptiontime: 51442 s
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | nevents: 400
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | neventsw: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | pid: 27392
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | pgrp: 27392
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | corecount: 8
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | event service: False
[2025-06-04 06:58:35] 2025-06-04 04:24:31,629 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 13: 2405241, 23: 2405297, 34: 2405325, 45: 2405481, 56: 2405509, 66: 2405537, 77: 2405565, 84: 2405827, 88: 2406135, 14
[2025-06-04 06:58:35] 2025-06-04 04:24:31,630 | INFO     | --------------------------------------------------
[2025-06-04 06:58:35] 2025-06-04 04:24:31,630 | INFO     | 
[2025-06-04 06:58:35] 2025-06-04 04:24:31,630 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 06:58:35] 2025-06-04 04:24:31,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,829 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:58:35] 2025-06-04 04:24:31,830 | INFO     | job 6677635666 has completed (purged errors)
[2025-06-04 06:58:35] 2025-06-04 04:24:31,830 | INFO     | overall cleanup function is called
[2025-06-04 06:58:35] 2025-06-04 04:24:32,839 | INFO     | --- collectZombieJob: --- 10, [27392]
[2025-06-04 06:58:35] 2025-06-04 04:24:32,839 | INFO     | zombie collector waiting for pid 27392
[2025-06-04 06:58:35] 2025-06-04 04:24:32,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:58:35] 2025-06-04 04:24:32,840 | INFO     | collected zombie processes
[2025-06-04 06:58:35] 2025-06-04 04:24:32,840 | INFO     | will attempt to kill all subprocesses of pid=27392
[2025-06-04 06:58:35] 2025-06-04 04:24:32,951 | INFO     | process IDs to be killed: [27392] (in reverse order)
[2025-06-04 06:58:35] 2025-06-04 04:24:33,725 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:58:35] 2025-06-04 04:24:33,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:58:35] 2025-06-04 04:24:33,729 | INFO     | did not find any defunct processes belonging to 27392
[2025-06-04 06:58:35] 2025-06-04 04:24:33,732 | INFO     | did not find any defunct processes belonging to 27392
[2025-06-04 06:58:35] 2025-06-04 04:24:33,733 | INFO     | ready for new job
[2025-06-04 06:58:35] 2025-06-04 04:24:33,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:58:35] 2025-06-04 04:24:33,735 | INFO     | **************************************
[2025-06-04 06:58:35] 2025-06-04 04:24:33,735 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:58:35] 2025-06-04 04:24:33,735 | INFO     | **************************************
[2025-06-04 06:58:35] 2025-06-04 04:24:33,735 | INFO     | 
[2025-06-04 06:58:35] 2025-06-04 04:24:33,736 | INFO     | pilot is running in a VM
[2025-06-04 06:58:35] 2025-06-04 04:24:33,736 | INFO     | architecture information:
[2025-06-04 06:58:35] 2025-06-04 04:24:33,749 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:58:35] 2025-06-04 04:24:34,017 | INFO     | cat /etc/os-release:
[2025-06-04 06:58:35] NAME="CentOS Linux"
[2025-06-04 06:58:35] VERSION="7 (Core)"
[2025-06-04 06:58:35] ID="centos"
[2025-06-04 06:58:35] ID_LIKE="rhel fedora"
[2025-06-04 06:58:35] VERSION_ID="7"
[2025-06-04 06:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:58:35] ANSI_COLOR="0;31"
[2025-06-04 06:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:58:35] HOME_URL="https://www.centos.org/"
[2025-06-04 06:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:58:35] 
[2025-06-04 06:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:58:35] 
[2025-06-04 06:58:35] 2025-06-04 04:24:34,017 | INFO     | **************************************
[2025-06-04 06:58:35] 2025-06-04 04:24:34,520 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 06:58:35] 2025-06-04 04:24:34,660 | INFO     | sufficient remaining disk space (497324916736 B)
[2025-06-04 06:58:35] 2025-06-04 04:24:34,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:58:35] 2025-06-04 04:24:34,661 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:58:35] 2025-06-04 04:24:34,661 | INFO     | update_server=False
[2025-06-04 06:58:35] 2025-06-04 04:24:34,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:58:35] 2025-06-04 04:24:34,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:58:35] 2025-06-04 04:24:34,663 | INFO     | aborting loop
[2025-06-04 06:58:35] 2025-06-04 04:24:34,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:58:35] 2025-06-04 04:24:34,675 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:58:35] 2025-06-04 04:24:34,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:58:35] 2025-06-04 04:24:34,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:58:35] 2025-06-04 04:24:34,876 | INFO     | all payload control threads have been joined
[2025-06-04 06:58:35] 2025-06-04 04:24:35,574 | INFO     | all data control threads have been joined
[2025-06-04 06:58:35] 2025-06-04 04:24:35,667 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:35,668 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:35,682 | INFO     | all job control threads have been joined
[2025-06-04 06:58:35] 2025-06-04 04:24:35,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:58:35] 2025-06-04 04:24:35,882 | INFO     | [payload] control thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:35,904 | INFO     | [job] validate thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,578 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,579 | INFO     | [data] control thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:58:35] 2025-06-04 04:24:36,685 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,687 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:36,688 | INFO     | [job] control thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:37,046 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:37,098 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:37,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:58:35] 2025-06-04 04:24:37,650 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:37,699 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:41,542 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:58:35] 2025-06-04 04:24:42,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441385658176)>', '<ExcThread(monitor, started 140440716171008)>']
[2025-06-04 06:58:35] 2025-06-04 04:24:42,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:58:35] 2025-06-04 04:24:42,723 | INFO     | [monitor] control thread has ended
[2025-06-04 06:58:35] 2025-06-04 04:24:47,443 | INFO     | all workflow threads have been joined
[2025-06-04 06:58:35] 2025-06-04 04:24:47,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:58:35] 2025-06-04 04:24:47,444 | INFO     | traces error code: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:47,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:58:35] 2025-06-04 04:24:47,830 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:58:35] 2025-06-04 04:24:47,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:58:35] 2025-06-04 04:24:48,026 [wrapper] pilotpid: 14774
[2025-06-04 06:58:35] 2025-06-04 04:24:48,070 [wrapper] Pilot exit status: 0
[2025-06-04 06:58:35] 2025-06-04 04:24:48,466 [wrapper] pandaids: 6677635666
[2025-06-04 06:58:35] 2025-06-04 04:24:48,956 [wrapper] cleanup supervisor_pilot 21314 14775
[2025-06-04 06:58:35] 2025-06-04 04:24:49,012 [wrapper] Test setup, not cleaning
[2025-06-04 06:58:35] 2025-06-04 04:24:49,083 [wrapper] apfmon messages muted
[2025-06-04 06:58:35] 2025-06-04 04:24:49,126 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:58:35] 2025-06-04 04:24:49,195 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:58:35]  *** Error codes and diagnostics ***
[2025-06-04 06:58:35]     "exeErrorCode": 0,
[2025-06-04 06:58:35]     "exeErrorDiag": "",
[2025-06-04 06:58:35]     "pilotErrorCode": 0,
[2025-06-04 06:58:35]     "pilotErrorDiag": "",
[2025-06-04 06:58:35]  *** Listing of results directory ***
[2025-06-04 06:58:35] total 395260
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:35 queuedata.json
[2025-06-04 06:58:35] -rwx------. 1 boinc boinc     37140 Jun  3 15:37 runpilot2-wrapper.sh
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:58:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:09 run_atlas
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:09 job.xml
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc      6392 Jun  4 02:09 init_data.xml
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc 214080219 Jun  4 02:09 EVNT.45006593._001374.pool.root.1
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:09 start_atlas.sh
[2025-06-04 06:58:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:09 shared
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:09 input.tar.gz
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:09 boinc_lockfile
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:20 pandaJob.out
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc    986077 Jun  4 02:23 agis_schedconf.cvmfs.json
[2025-06-04 06:58:35] drwx------. 4 boinc boinc      4096 Jun  4 02:23 pilot3
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc 183584333 Jun  4 06:21 HITS.45006595._034170.pool.root.1
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:21 boinc_task_state.xml
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc      1019 Jun  4 06:22 memory_monitor_summary.json
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc   1603667 Jun  4 06:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc    391832 Jun  4 06:22 log.45006595._034170.job.log.tgz.1
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc        95 Jun  4 06:24 pilot_heartbeat.json
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc      7695 Jun  4 06:24 heartbeat.json
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc      4540 Jun  4 06:24 pilotlog.txt
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc   1234584 Jun  4 06:24 log.45006595._034170.job.log.1
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc       357 Jun  4 06:24 output.list
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:24 runtime_log
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc   1648640 Jun  4 06:24 result.tar.gz
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc       657 Jun  4 06:24 spbLDmG0gg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9lYKDmNcqz2n.diag
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc      8673 Jun  4 06:24 runtime_log.err
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:58 boinc_mmap_file
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:58 wrapper_checkpoint.txt
[2025-06-04 06:58:35] -rw-r--r--. 1 boinc boinc     20515 Jun  4 06:58 stderr.txt
[2025-06-04 06:58:35] HITS file was successfully produced:
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc 183584333 Jun  4 06:21 shared/HITS.pool.root.1
[2025-06-04 06:58:35]  *** Contents of shared directory: ***
[2025-06-04 06:58:35] total 390476
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc 214080219 Jun  4 02:09 ATLAS.root_0
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:09 start_atlas.sh
[2025-06-04 06:58:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:09 input.tar.gz
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc 183584333 Jun  4 06:21 HITS.pool.root.1
[2025-06-04 06:58:35] -rw-------. 1 boinc boinc   1648640 Jun  4 06:24 result.tar.gz
06:58:37 (6672): run_atlas exited; CPU time 51641.003601
06:58:37 (6672): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN