Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:23 (3369079): wrapper (7.7.26015): starting
12:15:23 (3369079): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:15:23] Arguments: --nthreads 8
[2025-06-03 12:15:23] Threads: 8
[2025-06-03 12:15:23] Checking for CVMFS
[2025-06-03 12:15:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:15:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:15:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:15:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:15:24] 2.12.6.0 3646663 90606 333312 146748 1 187 21054138 32935937 2847 16776704 1 376544714 99.632 367936274 25217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:15:24] CVMFS is ok
[2025-06-03 12:15:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:15:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:15:24] Further information can be found at the LHC@home message board.
[2025-06-03 12:15:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:15:24] Checking for apptainer binary...
[2025-06-03 12:15:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:15:24] Running /usr/bin/apptainer --version
[2025-06-03 12:15:24] apptainer version 1.4.1-1.el9
[2025-06-03 12:15:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:15:24] c-5-2.aglt2.org
[2025-06-03 12:15:24] apptainer works
[2025-06-03 12:15:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:15:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:15:24] Starting ATLAS job with PandaID=6677636387
[2025-06-03 12:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:31:38]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:31:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:31:38]  is_altstaged=None
[2025-06-03 13:31:38]  is_tar=False
[2025-06-03 13:31:38]  lfn=log.45006595._034486.job.log.tgz.1
[2025-06-03 13:31:38]  mtime=0
[2025-06-03 13:31:38]  protocol_id=None
[2025-06-03 13:31:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:31:38]  replicas=None
[2025-06-03 13:31:38]  scope=mc23_13p6TeV
[2025-06-03 13:31:38]  status=None
[2025-06-03 13:31:38]  status_code=0
[2025-06-03 13:31:38]  storage_token=
[2025-06-03 13:31:38]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677636387/log.45006595._034486.job.log.tgz.1
[2025-06-03 13:31:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/05/log.45006595._034486.job.log.tgz.1
[2025-06-03 13:31:38]  workdir=None
[2025-06-03 13:31:38] ]
[2025-06-03 13:31:38] 2025-06-03 17:31:13,731 | INFO     | transferring file log.45006595._034486.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677636387/log.45006595._034486.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:31:38] 2025-06-03 17:31:13,731 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677636387/log.45006595._034486.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._034486.job
[2025-06-03 13:31:38] 2025-06-03 17:31:13,744 | INFO     | adding to output.list: log.45006595._034486.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/05/log.45006595._034486.job.log.tg
[2025-06-03 13:31:38] 2025-06-03 17:31:13,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:31:38] 2025-06-03 17:31:13,745 | INFO     | summary of transferred files:
[2025-06-03 13:31:38] 2025-06-03 17:31:13,745 | INFO     |  -- lfn=log.45006595._034486.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:31:38] 2025-06-03 17:31:13,746 | INFO     | stage-out finished correctly
[2025-06-03 13:31:38] 2025-06-03 17:31:14,908 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:31:38] 2025-06-03 17:31:15,014 | INFO     | job 6677636387 has state=finished
[2025-06-03 13:31:38] 2025-06-03 17:31:15,014 | INFO     | preparing for final server update for job 6677636387 in state='finished'
[2025-06-03 13:31:38] 2025-06-03 17:31:15,016 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:31:38] 2025-06-03 17:31:15,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:31:38] 2025-06-03 17:31:15,016 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:31:38] 2025-06-03 17:31:15,016 | INFO     | job 6677636387 has finished - writing final server update
[2025-06-03 13:31:38] 2025-06-03 17:31:15,017 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:31:38] 2025-06-03 17:31:15,031 | INFO     | executing command: lscpu
[2025-06-03 13:31:38] 2025-06-03 17:31:15,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:31:38] 2025-06-03 17:31:16,425 | INFO     | PID=3372713 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 13:31:38] 2025-06-03 17:31:16,426 | INFO     | .. there are 5 such processes running
[2025-06-03 13:31:38] 2025-06-03 17:31:17,260 | WARNING  | process 3379266 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 13:31:38] 2025-06-03 17:31:17,260 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677636387/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:31:38] 2025-06-03 17:31:17,526 | INFO     | number of running child processes to parent process 3379266: 1
[2025-06-03 13:31:38] 2025-06-03 17:31:17,527 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:31:38] 2025-06-03 17:31:18,479 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:31:38] 2025-06-03 17:31:18,480 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677636387/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:31:38] 2025-06-03 17:31:18,480 | INFO     | extracted standard info from prmon json
[2025-06-03 13:31:38] 2025-06-03 17:31:18,481 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:31:38] 2025-06-03 17:31:18,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:31:38] 2025-06-03 17:31:18,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:31:38] 2025-06-03 17:31:18,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:31:38] 2025-06-03 17:31:18,483 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | sum of deviations: 7731994488.0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | mean x: 1748969676.0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | mean y: 2172612.7910447763
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | -- intersect: -145031131304.718
[2025-06-03 13:31:38] 2025-06-03 17:31:18,484 | INFO     | intersect: -145031131304.718
[2025-06-03 13:31:38] 2025-06-03 17:31:18,485 | INFO     | chi2: 0.9925210272229569
[2025-06-03 13:31:38] 2025-06-03 17:31:18,485 | INFO     | -- intersect: -145031131304.718
[2025-06-03 13:31:38] 2025-06-03 17:31:18,485 | INFO     | current memory leak: 82.92 B/s (using 67 data points, chi2=0.99)
[2025-06-03 13:31:38] 2025-06-03 17:31:18,485 | INFO     | ..............................
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . Timing measurements:
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . get job = 0 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . initial setup = 2 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . payload setup = 6 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . stage-in = 0 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . payload execution = 4514 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . stage-out = 0 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | . log creation = 0 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,486 | INFO     | ..............................
[2025-06-03 13:31:38] 2025-06-03 17:31:18,594 | INFO     | 
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | job summary report
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | --------------------------------------------------
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | PanDA job id: 6677636387
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | task id: 45006595
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | errors: (none)
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:31:38] 2025-06-03 17:31:18,595 | INFO     | pilot state: finished 
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | transexitcode: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | exeerrorcode: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | exeerrordiag: 
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | exitcode: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | exitmsg: OK
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | cpuconsumptiontime: 30075 s
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | nevents: 400
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | neventsw: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:18,596 | INFO     | pid: 3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | pgrp: 3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | corecount: 8
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | event service: False
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | sizes: {0: 2405070, 1: 2405212, 4: 2405418, 11: 2405446, 4524: 2431530, 4525: 2440471, 4526: 2440655, 4529: 2440825}
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | --------------------------------------------------
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | 
[2025-06-03 13:31:38] 2025-06-03 17:31:18,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:31:38] 2025-06-03 17:31:18,617 | INFO     | job 6677636387 has completed (purged errors)
[2025-06-03 13:31:38] 2025-06-03 17:31:18,618 | INFO     | overall cleanup function is called
[2025-06-03 13:31:38] 2025-06-03 17:31:19,626 | INFO     | --- collectZombieJob: --- 10, [3379266]
[2025-06-03 13:31:38] 2025-06-03 17:31:19,626 | INFO     | zombie collector waiting for pid 3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:19,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:31:38] 2025-06-03 17:31:19,626 | INFO     | collected zombie processes
[2025-06-03 13:31:38] 2025-06-03 17:31:19,626 | INFO     | will attempt to kill all subprocesses of pid=3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:19,887 | INFO     | process IDs to be killed: [3379266] (in reverse order)
[2025-06-03 13:31:38] 2025-06-03 17:31:19,960 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:31:38] 2025-06-03 17:31:19,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:31:38] 2025-06-03 17:31:19,968 | INFO     | did not find any defunct processes belonging to 3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:19,975 | INFO     | did not find any defunct processes belonging to 3379266
[2025-06-03 13:31:38] 2025-06-03 17:31:19,975 | INFO     | ready for new job
[2025-06-03 13:31:38] 2025-06-03 17:31:19,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:31:38] 2025-06-03 17:31:19,977 | INFO     | **************************************
[2025-06-03 13:31:38] 2025-06-03 17:31:19,977 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:31:38] 2025-06-03 17:31:19,978 | INFO     | **************************************
[2025-06-03 13:31:38] 2025-06-03 17:31:19,978 | INFO     | 
[2025-06-03 13:31:38] 2025-06-03 17:31:19,991 | INFO     | architecture information:
[2025-06-03 13:31:38] 2025-06-03 17:31:19,992 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:31:38] 2025-06-03 17:31:20,005 | INFO     | cat /etc/os-release:
[2025-06-03 13:31:38] NAME="CentOS Linux"
[2025-06-03 13:31:38] VERSION="7 (Core)"
[2025-06-03 13:31:38] ID="centos"
[2025-06-03 13:31:38] ID_LIKE="rhel fedora"
[2025-06-03 13:31:38] VERSION_ID="7"
[2025-06-03 13:31:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:31:38] ANSI_COLOR="0;31"
[2025-06-03 13:31:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:31:38] HOME_URL="https://www.centos.org/"
[2025-06-03 13:31:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:31:38] 
[2025-06-03 13:31:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:31:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:31:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:31:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:31:38] 
[2025-06-03 13:31:38] 2025-06-03 17:31:20,006 | INFO     | **************************************
[2025-06-03 13:31:38] 2025-06-03 17:31:20,509 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 13:31:38] 2025-06-03 17:31:20,523 | INFO     | sufficient remaining disk space (74629251072 B)
[2025-06-03 13:31:38] 2025-06-03 17:31:20,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:31:38] 2025-06-03 17:31:20,524 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:31:38] 2025-06-03 17:31:20,524 | INFO     | update_server=False
[2025-06-03 13:31:38] 2025-06-03 17:31:20,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:31:38] 2025-06-03 17:31:20,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:31:38] 2025-06-03 17:31:20,524 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:31:38] 2025-06-03 17:31:20,525 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:31:38] 2025-06-03 17:31:20,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:31:38] 2025-06-03 17:31:20,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:31:38] 2025-06-03 17:31:20,547 | INFO     | all data control threads have been joined
[2025-06-03 13:31:38] 2025-06-03 17:31:20,949 | INFO     | all job control threads have been joined
[2025-06-03 13:31:38] 2025-06-03 17:31:21,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:31:38] 2025-06-03 17:31:21,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:31:38] 2025-06-03 17:31:21,040 | INFO     | aborting loop
[2025-06-03 13:31:38] 2025-06-03 17:31:21,153 | INFO     | all payload control threads have been joined
[2025-06-03 13:31:38] 2025-06-03 17:31:21,529 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:21,529 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:21,552 | INFO     | [data] control thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:21,577 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:21,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:31:38] 2025-06-03 17:31:21,872 | INFO     | [job] validate thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:21,954 | INFO     | [job] control thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,017 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,045 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,045 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,153 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,159 | INFO     | [payload] control thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,378 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:22,899 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:23,874 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:25,030 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:31,449 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:31:38] 2025-06-03 17:31:32,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:31:38] 2025-06-03 17:31:33,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851387664192)>', '<ExcThread(monitor, started 139850762147584)>']
[2025-06-03 13:31:38] 2025-06-03 17:31:33,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:31:38] 2025-06-03 17:31:33,586 | INFO     | [monitor] control thread has ended
[2025-06-03 13:31:38] 2025-06-03 17:31:38,088 | INFO     | all workflow threads have been joined
[2025-06-03 13:31:38] 2025-06-03 17:31:38,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:31:38] 2025-06-03 17:31:38,089 | INFO     | traces error code: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:38,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:31:38] 2025-06-03 17:31:38,193 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:31:38] 2025-06-03 17:31:38,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:31:38] 2025-06-03 17:31:38,198 [wrapper] pilotpid: 3372713
[2025-06-03 13:31:38] 2025-06-03 17:31:38,201 [wrapper] Pilot exit status: 0
[2025-06-03 13:31:38] 2025-06-03 17:31:38,209 [wrapper] pandaids: 6677636387
[2025-06-03 13:31:38] 2025-06-03 17:31:38,255 [wrapper] cleanup supervisor_pilot 3566105 3372714
[2025-06-03 13:31:38] 2025-06-03 17:31:38,258 [wrapper] Test setup, not cleaning
[2025-06-03 13:31:38] 2025-06-03 17:31:38,261 [wrapper] apfmon messages muted
[2025-06-03 13:31:38] 2025-06-03 17:31:38,263 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:31:38] 2025-06-03 17:31:38,266 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:31:38]  *** Error codes and diagnostics ***
[2025-06-03 13:31:38]     "exeErrorCode": 0,
[2025-06-03 13:31:38]     "exeErrorDiag": "",
[2025-06-03 13:31:38]     "pilotErrorCode": 0,
[2025-06-03 13:31:38]     "pilotErrorDiag": "",
[2025-06-03 13:31:38]  *** Listing of results directory ***
[2025-06-03 13:31:38] total 389232
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:42 queuedata.json
[2025-06-03 13:31:38] -rwx------. 1 boincer umatlas     37140 Jun  3 09:43 runpilot2-wrapper.sh
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:31:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:15 run_atlas
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:15 job.xml
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas 215272195 Jun  3 12:15 EVNT.45006593._001387.pool.root.1
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 12:15 input.tar.gz
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:15 start_atlas.sh
[2025-06-03 13:31:38] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:15 shared
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:15 boinc_lockfile
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:15 pandaJob.out
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas    983735 Jun  3 12:15 agis_schedconf.cvmfs.json
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:31:38] drwx------. 4 boincer umatlas      4096 Jun  3 12:15 pilot3
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas 177960527 Jun  3 13:30 HITS.45006595._034486.pool.root.1
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:30 boinc_task_state.xml
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas        95 Jun  3 13:30 pilot_heartbeat.json
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas      1030 Jun  3 13:31 memory_monitor_summary.json
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas    299551 Jun  3 13:31 log.45006595._034486.job.log.tgz.1
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas      7705 Jun  3 13:31 heartbeat.json
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 13:31 init_data.xml
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:31 boinc_mmap_file
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:31 wrapper_checkpoint.txt
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas      4548 Jun  3 13:31 pilotlog.txt
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas    451541 Jun  3 13:31 log.45006595._034486.job.log.1
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas       357 Jun  3 13:31 output.list
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:31 runtime_log
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas    768000 Jun  3 13:31 result.tar.gz
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas       647 Jun  3 13:31 vgvMDm75gg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5OkKDmePRe3m.diag
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 13:31 runtime_log.err
[2025-06-03 13:31:38] -rw-r--r--. 1 boincer umatlas     21436 Jun  3 13:31 stderr.txt
[2025-06-03 13:31:38] HITS file was successfully produced:
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas 177960527 Jun  3 13:30 shared/HITS.pool.root.1
[2025-06-03 13:31:38]  *** Contents of shared directory: ***
[2025-06-03 13:31:38] total 385296
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas 215272195 Jun  3 12:15 ATLAS.root_0
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 12:15 input.tar.gz
[2025-06-03 13:31:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:15 start_atlas.sh
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas 177960527 Jun  3 13:30 HITS.pool.root.1
[2025-06-03 13:31:38] -rw-------. 1 boincer umatlas    768000 Jun  3 13:31 result.tar.gz
13:31:39 (3369079): run_atlas exited; CPU time 30191.612119
13:31:39 (3369079): called boinc_finish(0)

</stderr_txt>
]]>

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