Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:47 (28152): wrapper (7.7.26015): starting
03:45:47 (28152): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:45:47] Arguments: --nthreads 8
[2025-06-04 03:45:47] Threads: 8
[2025-06-04 03:45:47] Checking for CVMFS
[2025-06-04 03:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:45:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:45:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:45:49] 2.11.2.0 28641 32581 95436 146762 0 299 18855445 25165824 4133 130560 0 18011552 99.812 19986862 2009 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:45:49] CVMFS is ok
[2025-06-04 03:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:45:49] Checking for apptainer binary...
[2025-06-04 03:45:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:45:49] Running /usr/bin/apptainer --version
[2025-06-04 03:45:49] apptainer version 1.3.2-1.el7
[2025-06-04 03:45:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:01:57] cg-vwn402.simple-grid.lan
[2025-06-04 08:01:57] apptainer works
[2025-06-04 08:01:57] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:01:57] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:01:57] Starting ATLAS job with PandaID=6677621694
[2025-06-04 08:01:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:32:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:32:50] 2025-06-04 10:09:04,813 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677621694/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,814 | INFO     | extracted standard info from prmon json
[2025-06-04 12:32:50] 2025-06-04 10:09:04,814 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:32:50] 2025-06-04 10:09:04,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:32:50] 2025-06-04 10:09:04,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:32:50] 2025-06-04 10:09:04,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:32:50] 2025-06-04 10:09:04,820 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:32:50] 2025-06-04 10:09:04,821 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,823 | INFO     | sum of deviations: 59618441774.50001
[2025-06-04 12:32:50] 2025-06-04 10:09:04,823 | INFO     | mean x: 1749024583.5
[2025-06-04 12:32:50] 2025-06-04 10:09:04,823 | INFO     | mean y: 2439806.978448276
[2025-06-04 12:32:50] 2025-06-04 10:09:04,823 | INFO     | -- intersect: -26927924274.27052
[2025-06-04 12:32:50] 2025-06-04 10:09:04,823 | INFO     | intersect: -26927924274.27052
[2025-06-04 12:32:50] 2025-06-04 10:09:04,824 | INFO     | chi2: 6.4159777236369955
[2025-06-04 12:32:50] 2025-06-04 10:09:04,824 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,826 | INFO     | sum of deviations: 73564615299.99998
[2025-06-04 12:32:50] 2025-06-04 10:09:04,827 | INFO     | mean x: 1749024431.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,827 | INFO     | mean y: 2448321.9030837
[2025-06-04 12:32:50] 2025-06-04 10:09:04,827 | INFO     | -- intersect: -35472132858.220276
[2025-06-04 12:32:50] 2025-06-04 10:09:04,827 | INFO     | intersect: -35472132858.220276
[2025-06-04 12:32:50] 2025-06-04 10:09:04,827 | INFO     | chi2: 5.7019355755333345
[2025-06-04 12:32:50] 2025-06-04 10:09:04,828 | INFO     | current chi2=5.7019355755333345 (change=11.129124489835279 %)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,828 | INFO     | right removable region: 226
[2025-06-04 12:32:50] 2025-06-04 10:09:04,828 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,830 | INFO     | sum of deviations: -19286549644.999996
[2025-06-04 12:32:50] 2025-06-04 10:09:04,830 | INFO     | mean x: 1749024736.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,830 | INFO     | mean y: 2488871.436123348
[2025-06-04 12:32:50] 2025-06-04 10:09:04,830 | INFO     | -- intersect: 9302916632.603779
[2025-06-04 12:32:50] 2025-06-04 10:09:04,831 | INFO     | intersect: 9302916632.603779
[2025-06-04 12:32:50] 2025-06-04 10:09:04,831 | INFO     | chi2: 1.7747678297554217
[2025-06-04 12:32:50] 2025-06-04 10:09:04,831 | INFO     | current chi2=1.7747678297554217 (change=72.33831060202985 %)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,832 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 12:32:50] 2025-06-04 10:09:04,857 | INFO     | sum of deviations: -47254987059.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,857 | INFO     | mean x: 1749024888.5
[2025-06-04 12:32:50] 2025-06-04 10:09:04,857 | INFO     | mean y: 2506921.6756756757
[2025-06-04 12:32:50] 2025-06-04 10:09:04,857 | INFO     | -- intersect: 24364628315.849716
[2025-06-04 12:32:50] 2025-06-04 10:09:04,857 | INFO     | intersect: 24364628315.849716
[2025-06-04 12:32:50] 2025-06-04 10:09:04,858 | INFO     | chi2: 0.9555428355003862
[2025-06-04 12:32:50] 2025-06-04 10:09:04,858 | INFO     | current chi2=0.9555428355003862 (change=46.159558479710086 %)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,858 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,860 | INFO     | sum of deviations: -42976054768.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,860 | INFO     | mean x: 1749025041.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,860 | INFO     | mean y: 2503984.115207373
[2025-06-04 12:32:50] 2025-06-04 10:09:04,861 | INFO     | -- intersect: 23725753093.00078
[2025-06-04 12:32:50] 2025-06-04 10:09:04,861 | INFO     | intersect: 23725753093.00078
[2025-06-04 12:32:50] 2025-06-04 10:09:04,861 | INFO     | chi2: 0.9444176042162024
[2025-06-04 12:32:50] 2025-06-04 10:09:04,861 | INFO     | current chi2=0.9444176042162024 (change=1.164283888786413 %)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,861 | INFO     | left removable region: 30
[2025-06-04 12:32:50] 2025-06-04 10:09:04,862 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 12:32:50] 2025-06-04 10:09:04,863 | INFO     | sum of deviations: -5481174550.5
[2025-06-04 12:32:50] 2025-06-04 10:09:04,863 | INFO     | mean x: 1749025315.5
[2025-06-04 12:32:50] 2025-06-04 10:09:04,863 | INFO     | mean y: 2497080.2704081633
[2025-06-04 12:32:50] 2025-06-04 10:09:04,864 | INFO     | -- intersect: 4108643155.8226147
[2025-06-04 12:32:50] 2025-06-04 10:09:04,864 | INFO     | intersect: 4108643155.8226147
[2025-06-04 12:32:50] 2025-06-04 10:09:04,864 | INFO     | chi2: 0.06163941721373101
[2025-06-04 12:32:50] 2025-06-04 10:09:04,864 | INFO     | -- intersect: 4108643155.8226147
[2025-06-04 12:32:50] 2025-06-04 10:09:04,864 | INFO     | current memory leak: -2.35 B/s (using 196 data points, chi2=0.06)
[2025-06-04 12:32:50] 2025-06-04 10:09:04,865 | INFO     | ..............................
[2025-06-04 12:32:50] 2025-06-04 10:09:04,865 | INFO     | . Timing measurements:
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . get job = 0 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . initial setup = 5 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . payload setup = 138 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . stage-in = 0 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . payload execution = 14252 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . stage-out = 1 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | . log creation = 0 s
[2025-06-04 12:32:50] 2025-06-04 10:09:04,866 | INFO     | ..............................
[2025-06-04 12:32:50] 2025-06-04 10:09:05,127 | INFO     | 
[2025-06-04 12:32:50] 2025-06-04 10:09:05,127 | INFO     | job summary report
[2025-06-04 12:32:50] 2025-06-04 10:09:05,127 | INFO     | --------------------------------------------------
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | PanDA job id: 6677621694
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | task id: 45006595
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | errors: (none)
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | pilot state: finished 
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | transexitcode: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | exeerrorcode: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | exeerrordiag: 
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | exitcode: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:05,128 | INFO     | exitmsg: OK
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | cpuconsumptiontime: 51158 s
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | nevents: 400
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | neventsw: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | pid: 21715
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | pgrp: 21715
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | corecount: 8
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | event service: False
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | sizes: {0: 2404957, 1: 2405041, 2: 2405212, 12: 2405240, 23: 2405268, 34: 2405296, 45: 2405452, 55: 2405480, 66: 2405508, 77: 2405536, 85: 2405798, 88: 2406106, 14
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | --------------------------------------------------
[2025-06-04 12:32:50] 2025-06-04 10:09:05,129 | INFO     | 
[2025-06-04 12:32:50] 2025-06-04 10:09:05,130 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 12:32:50] 2025-06-04 10:09:05,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:32:50] 2025-06-04 10:09:05,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:32:50] 2025-06-04 10:09:05,664 | INFO     | job 6677621694 has completed (purged errors)
[2025-06-04 12:32:50] 2025-06-04 10:09:05,664 | INFO     | overall cleanup function is called
[2025-06-04 12:32:50] 2025-06-04 10:09:06,673 | INFO     | --- collectZombieJob: --- 10, [21715]
[2025-06-04 12:32:50] 2025-06-04 10:09:06,673 | INFO     | zombie collector waiting for pid 21715
[2025-06-04 12:32:50] 2025-06-04 10:09:06,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:32:50] 2025-06-04 10:09:06,674 | INFO     | collected zombie processes
[2025-06-04 12:32:50] 2025-06-04 10:09:06,674 | INFO     | will attempt to kill all subprocesses of pid=21715
[2025-06-04 12:32:50] 2025-06-04 10:09:06,814 | INFO     | process IDs to be killed: [21715] (in reverse order)
[2025-06-04 12:32:50] 2025-06-04 10:09:07,391 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:32:50] 2025-06-04 10:09:07,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:32:50] 2025-06-04 10:09:07,395 | INFO     | did not find any defunct processes belonging to 21715
[2025-06-04 12:32:50] 2025-06-04 10:09:07,398 | INFO     | did not find any defunct processes belonging to 21715
[2025-06-04 12:32:50] 2025-06-04 10:09:07,399 | INFO     | ready for new job
[2025-06-04 12:32:50] 2025-06-04 10:09:07,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:32:50] 2025-06-04 10:09:07,401 | INFO     | **************************************
[2025-06-04 12:32:50] 2025-06-04 10:09:07,401 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:32:50] 2025-06-04 10:09:07,402 | INFO     | **************************************
[2025-06-04 12:32:50] 2025-06-04 10:09:07,402 | INFO     | 
[2025-06-04 12:32:50] 2025-06-04 10:09:07,402 | INFO     | pilot is running in a VM
[2025-06-04 12:32:50] 2025-06-04 10:09:07,402 | INFO     | architecture information:
[2025-06-04 12:32:50] 2025-06-04 10:09:07,412 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:32:50] 2025-06-04 10:09:07,488 | INFO     | cat /etc/os-release:
[2025-06-04 12:32:50] NAME="CentOS Linux"
[2025-06-04 12:32:50] VERSION="7 (Core)"
[2025-06-04 12:32:50] ID="centos"
[2025-06-04 12:32:50] ID_LIKE="rhel fedora"
[2025-06-04 12:32:50] VERSION_ID="7"
[2025-06-04 12:32:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:32:50] ANSI_COLOR="0;31"
[2025-06-04 12:32:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:32:50] HOME_URL="https://www.centos.org/"
[2025-06-04 12:32:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:32:50] 
[2025-06-04 12:32:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:32:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:32:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:32:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:32:50] 
[2025-06-04 12:32:50] 2025-06-04 10:09:07,488 | INFO     | **************************************
[2025-06-04 12:32:50] 2025-06-04 10:09:07,993 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 12:32:50] 2025-06-04 10:09:08,130 | INFO     | sufficient remaining disk space (496406364160 B)
[2025-06-04 12:32:50] 2025-06-04 10:09:08,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:32:50] 2025-06-04 10:09:08,131 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:32:50] 2025-06-04 10:09:08,131 | INFO     | update_server=False
[2025-06-04 12:32:50] 2025-06-04 10:09:08,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:32:50] 2025-06-04 10:09:08,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:32:50] 2025-06-04 10:09:08,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:32:50] 2025-06-04 10:09:08,135 | INFO     | aborting loop
[2025-06-04 12:32:50] 2025-06-04 10:09:08,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:32:50] 2025-06-04 10:09:08,191 | INFO     | all data control threads have been joined
[2025-06-04 12:32:50] 2025-06-04 10:09:08,508 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:32:50] 2025-06-04 10:09:08,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:32:50] 2025-06-04 10:09:08,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:32:50] 2025-06-04 10:09:09,137 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,140 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,157 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,182 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,197 | INFO     | [data] control thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,267 | INFO     | all payload control threads have been joined
[2025-06-04 12:32:50] 2025-06-04 10:09:09,498 | INFO     | all job control threads have been joined
[2025-06-04 12:32:50] 2025-06-04 10:09:09,641 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,743 | INFO     | [job] validate thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,868 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:09,907 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:10,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:32:50] 2025-06-04 10:09:10,063 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:10,140 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:10,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:10,273 | INFO     | [payload] control thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:10,504 | INFO     | [job] control thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:11,054 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:12,144 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:32:50] 2025-06-04 10:09:13,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686597334848)>', '<ExcThread(monitor, started 139686009886464)>']
[2025-06-04 12:32:50] 2025-06-04 10:09:13,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:32:50] 2025-06-04 10:09:13,537 | INFO     | [monitor] control thread has ended
[2025-06-04 12:32:50] 2025-06-04 10:09:18,520 | INFO     | all workflow threads have been joined
[2025-06-04 12:32:50] 2025-06-04 10:09:18,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:32:50] 2025-06-04 10:09:18,521 | INFO     | traces error code: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:18,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:32:50] 2025-06-04 10:09:18,822 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:32:50] 2025-06-04 10:09:18,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:32:50] 2025-06-04 10:09:18,836 [wrapper] pilotpid: 13126
[2025-06-04 12:32:50] 2025-06-04 10:09:18,851 [wrapper] Pilot exit status: 0
[2025-06-04 12:32:50] 2025-06-04 10:09:19,314 [wrapper] pandaids: 6677621694
[2025-06-04 12:32:50] 2025-06-04 10:09:20,020 [wrapper] cleanup supervisor_pilot  7678 13127
[2025-06-04 12:32:50] 2025-06-04 10:09:20,095 [wrapper] Test setup, not cleaning
[2025-06-04 12:32:50] 2025-06-04 10:09:20,211 [wrapper] apfmon messages muted
[2025-06-04 12:32:50] 2025-06-04 10:09:20,303 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:32:50] 2025-06-04 10:09:20,436 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:32:50]  *** Error codes and diagnostics ***
[2025-06-04 12:32:50]     "exeErrorCode": 0,
[2025-06-04 12:32:50]     "exeErrorDiag": "",
[2025-06-04 12:32:50]     "pilotErrorCode": 0,
[2025-06-04 12:32:50]     "pilotErrorDiag": "",
[2025-06-04 12:32:50]  *** Listing of results directory ***
[2025-06-04 12:32:50] total 395704
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 12:32:50] -rwx------. 1 boinc boinc     37140 Jun  3 15:23 runpilot2-wrapper.sh
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:23 queuedata.json
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:32:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:45 run_atlas
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:45 job.xml
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc 215304294 Jun  4 03:45 EVNT.45006593._001360.pool.root.1
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc      6390 Jun  4 03:45 init_data.xml
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:45 start_atlas.sh
[2025-06-04 12:32:50] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:45 shared
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:45 input.tar.gz
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:45 boinc_lockfile
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc      2525 Jun  4 08:01 pandaJob.out
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc    986745 Jun  4 08:04 agis_schedconf.cvmfs.json
[2025-06-04 12:32:50] drwx------. 4 boinc boinc      4096 Jun  4 08:04 pilot3
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc 182801260 Jun  4 12:06 HITS.45006595._033800.pool.root.1
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc       530 Jun  4 12:06 boinc_task_state.xml
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc      1015 Jun  4 12:07 memory_monitor_summary.json
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc   1603667 Jun  4 12:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc    384847 Jun  4 12:07 log.45006595._033800.job.log.tgz.1
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc        95 Jun  4 12:08 pilot_heartbeat.json
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc      7687 Jun  4 12:09 heartbeat.json
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc      4416 Jun  4 12:09 pilotlog.txt
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc   1252520 Jun  4 12:09 log.45006595._033800.job.log.1
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc       357 Jun  4 12:09 output.list
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc       620 Jun  4 12:09 runtime_log
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc   1658880 Jun  4 12:09 result.tar.gz
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc      8659 Jun  4 12:09 runtime_log.err
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc       657 Jun  4 12:09 93OMDmVngg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmphYKDmvmcgum.diag
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:32 boinc_mmap_file
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:32 wrapper_checkpoint.txt
[2025-06-04 12:32:50] -rw-r--r--. 1 boinc boinc     20467 Jun  4 12:32 stderr.txt
[2025-06-04 12:32:50] HITS file was successfully produced:
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc 182801260 Jun  4 12:06 shared/HITS.pool.root.1
[2025-06-04 12:32:50]  *** Contents of shared directory: ***
[2025-06-04 12:32:50] total 390916
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc 215304294 Jun  4 03:45 ATLAS.root_0
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:45 start_atlas.sh
[2025-06-04 12:32:50] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:45 input.tar.gz
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc 182801260 Jun  4 12:06 HITS.pool.root.1
[2025-06-04 12:32:50] -rw-------. 1 boinc boinc   1658880 Jun  4 12:09 result.tar.gz
12:32:52 (28152): run_atlas exited; CPU time 51371.763445
12:32:52 (28152): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN