Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:12:17 (562378): wrapper (7.7.26015): starting
12:12:17 (562378): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:12:17] Arguments: --nthreads 8
[2025-06-03 12:12:17] Threads: 8
[2025-06-03 12:12:17] Checking for CVMFS
[2025-06-03 12:12:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:12:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:12:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:12:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:12:17] 2.12.6.0 3733875 171306 394760 146748 0 187 23550428 32935937 3664 130560 1 380632087 99.638 384264925 25463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:12:17] CVMFS is ok
[2025-06-03 12:12:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:12:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:12:17] Further information can be found at the LHC@home message board.
[2025-06-03 12:12:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:12:17] Checking for apptainer binary...
[2025-06-03 12:12:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:12:17] Running /usr/bin/apptainer --version
[2025-06-03 12:12:17] apptainer version 1.4.1-1.el9
[2025-06-03 12:12:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:12:17] c-6-2.aglt2.org
[2025-06-03 12:12:17] apptainer works
[2025-06-03 12:12:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:12:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:12:18] Starting ATLAS job with PandaID=6677635304
[2025-06-03 12:12:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:40:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:40:33]  filetype=log
[2025-06-03 13:40:33]  guid=28a637e9-d6ee-44f7-9739-327e6fdfb4e4
[2025-06-03 13:40:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:40:33]  is_altstaged=None
[2025-06-03 13:40:33]  is_tar=False
[2025-06-03 13:40:33]  lfn=log.45006595._033950.job.log.tgz.1
[2025-06-03 13:40:33]  mtime=0
[2025-06-03 13:40:33]  protocol_id=None
[2025-06-03 13:40:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:40:33]  replicas=None
[2025-06-03 13:40:33]  scope=mc23_13p6TeV
[2025-06-03 13:40:33]  status=None
[2025-06-03 13:40:33]  status_code=0
[2025-06-03 13:40:33]  storage_token=
[2025-06-03 13:40:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677635304/log.45006595._033950.job.log.tgz.1
[2025-06-03 13:40:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/9d/log.45006595._033950.job.log.tgz.1
[2025-06-03 13:40:33]  workdir=None
[2025-06-03 13:40:33] ]
[2025-06-03 13:40:33] 2025-06-03 17:40:17,394 | INFO     | transferring file log.45006595._033950.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677635304/log.45006595._033950.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:40:33] 2025-06-03 17:40:17,395 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677635304/log.45006595._033950.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._033950.job
[2025-06-03 13:40:33] 2025-06-03 17:40:17,411 | INFO     | adding to output.list: log.45006595._033950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/9d/log.45006595._033950.job.log.tg
[2025-06-03 13:40:33] 2025-06-03 17:40:17,412 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:40:33] 2025-06-03 17:40:17,412 | INFO     | summary of transferred files:
[2025-06-03 13:40:33] 2025-06-03 17:40:17,412 | INFO     |  -- lfn=log.45006595._033950.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:40:33] 2025-06-03 17:40:17,412 | INFO     | stage-out finished correctly
[2025-06-03 13:40:33] 2025-06-03 17:40:17,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:40:33] 2025-06-03 17:40:17,622 | INFO     | job 6677635304 has state=finished
[2025-06-03 13:40:33] 2025-06-03 17:40:17,622 | INFO     | preparing for final server update for job 6677635304 in state='finished'
[2025-06-03 13:40:33] 2025-06-03 17:40:17,623 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:40:33] 2025-06-03 17:40:17,623 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:40:33] 2025-06-03 17:40:17,623 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:40:33] 2025-06-03 17:40:17,623 | INFO     | job 6677635304 has finished - writing final server update
[2025-06-03 13:40:33] 2025-06-03 17:40:17,624 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:40:33] 2025-06-03 17:40:17,638 | INFO     | executing command: lscpu
[2025-06-03 13:40:33] 2025-06-03 17:40:17,693 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:40:33] 2025-06-03 17:40:18,321 | INFO     | monitor loop #391: job 0:6677635304 is in state 'finished'
[2025-06-03 13:40:33] 2025-06-03 17:40:18,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:40:33] 2025-06-03 17:40:19,554 | INFO     | 5274s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 13:40:33] 2025-06-03 17:40:20,823 | INFO     | monitor loop #392: job 0:6677635304 is in state 'finished'
[2025-06-03 13:40:33] 2025-06-03 17:40:20,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:40:33] 2025-06-03 17:40:21,291 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677635304/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,292 | INFO     | extracted standard info from prmon json
[2025-06-03 13:40:33] 2025-06-03 17:40:21,293 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:40:33] 2025-06-03 17:40:21,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:40:33] 2025-06-03 17:40:21,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:40:33] 2025-06-03 17:40:21,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:40:33] 2025-06-03 17:40:21,296 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:40:33] 2025-06-03 17:40:21,296 | INFO     | sum of square deviations: 152858680.0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,297 | INFO     | sum of deviations: 9703257556.0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,297 | INFO     | mean x: 1748969858.0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,297 | INFO     | mean y: 2155107.8227848103
[2025-06-03 13:40:33] 2025-06-03 17:40:21,297 | INFO     | -- intersect: -111020032116.70871
[2025-06-03 13:40:33] 2025-06-03 17:40:21,297 | INFO     | intersect: -111020032116.70871
[2025-06-03 13:40:33] 2025-06-03 17:40:21,298 | INFO     | chi2: 1.4146669789778887
[2025-06-03 13:40:33] 2025-06-03 17:40:21,298 | INFO     | -- intersect: -111020032116.70871
[2025-06-03 13:40:33] 2025-06-03 17:40:21,298 | INFO     | current memory leak: 63.48 B/s (using 79 data points, chi2=1.41)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,298 | INFO     | ..............................
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . Timing measurements:
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . get job = 0 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . initial setup = 2 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . payload setup = 6 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . stage-in = 0 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . payload execution = 5243 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . stage-out = 0 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | . log creation = 0 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,299 | INFO     | ..............................
[2025-06-03 13:40:33] 2025-06-03 17:40:21,409 | INFO     | 
[2025-06-03 13:40:33] 2025-06-03 17:40:21,409 | INFO     | job summary report
[2025-06-03 13:40:33] 2025-06-03 17:40:21,409 | INFO     | --------------------------------------------------
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | PanDA job id: 6677635304
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | task id: 45006595
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | errors: (none)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | pilot state: finished 
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | transexitcode: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | exeerrorcode: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | exeerrordiag: 
[2025-06-03 13:40:33] 2025-06-03 17:40:21,410 | INFO     | exitcode: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | exitmsg: OK
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | cpuconsumptiontime: 35399 s
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | nevents: 400
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | neventsw: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | pid: 572613
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | pgrp: 572613
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | corecount: 8
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | event service: False
[2025-06-03 13:40:33] 2025-06-03 17:40:21,411 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 5253: 2431753, 5254: 2440878, 5258: 2440992}
[2025-06-03 13:40:33] 2025-06-03 17:40:21,412 | INFO     | --------------------------------------------------
[2025-06-03 13:40:33] 2025-06-03 17:40:21,412 | INFO     | 
[2025-06-03 13:40:33] 2025-06-03 17:40:21,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 13:40:33] 2025-06-03 17:40:21,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:40:33] 2025-06-03 17:40:21,432 | INFO     | job 6677635304 has completed (purged errors)
[2025-06-03 13:40:33] 2025-06-03 17:40:21,433 | INFO     | overall cleanup function is called
[2025-06-03 13:40:33] 2025-06-03 17:40:22,438 | INFO     | --- collectZombieJob: --- 10, [572613]
[2025-06-03 13:40:33] 2025-06-03 17:40:22,439 | INFO     | zombie collector waiting for pid 572613
[2025-06-03 13:40:33] 2025-06-03 17:40:22,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:40:33] 2025-06-03 17:40:22,439 | INFO     | collected zombie processes
[2025-06-03 13:40:33] 2025-06-03 17:40:22,439 | INFO     | will attempt to kill all subprocesses of pid=572613
[2025-06-03 13:40:33] 2025-06-03 17:40:22,703 | INFO     | process IDs to be killed: [572613] (in reverse order)
[2025-06-03 13:40:33] 2025-06-03 17:40:22,775 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:40:33] 2025-06-03 17:40:22,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:40:33] 2025-06-03 17:40:22,783 | INFO     | did not find any defunct processes belonging to 572613
[2025-06-03 13:40:33] 2025-06-03 17:40:22,790 | INFO     | did not find any defunct processes belonging to 572613
[2025-06-03 13:40:33] 2025-06-03 17:40:22,790 | INFO     | ready for new job
[2025-06-03 13:40:33] 2025-06-03 17:40:22,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:40:33] 2025-06-03 17:40:22,792 | INFO     | **************************************
[2025-06-03 13:40:33] 2025-06-03 17:40:22,792 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:40:33] 2025-06-03 17:40:22,792 | INFO     | **************************************
[2025-06-03 13:40:33] 2025-06-03 17:40:22,792 | INFO     | 
[2025-06-03 13:40:33] 2025-06-03 17:40:22,805 | INFO     | architecture information:
[2025-06-03 13:40:33] 2025-06-03 17:40:22,806 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:40:33] 2025-06-03 17:40:22,819 | INFO     | cat /etc/os-release:
[2025-06-03 13:40:33] NAME="CentOS Linux"
[2025-06-03 13:40:33] VERSION="7 (Core)"
[2025-06-03 13:40:33] ID="centos"
[2025-06-03 13:40:33] ID_LIKE="rhel fedora"
[2025-06-03 13:40:33] VERSION_ID="7"
[2025-06-03 13:40:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:40:33] ANSI_COLOR="0;31"
[2025-06-03 13:40:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:40:33] HOME_URL="https://www.centos.org/"
[2025-06-03 13:40:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:40:33] 
[2025-06-03 13:40:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:40:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:40:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:40:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:40:33] 
[2025-06-03 13:40:33] 2025-06-03 17:40:22,819 | INFO     | **************************************
[2025-06-03 13:40:33] 2025-06-03 17:40:23,322 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 13:40:33] 2025-06-03 17:40:23,337 | INFO     | sufficient remaining disk space (74617716736 B)
[2025-06-03 13:40:33] 2025-06-03 17:40:23,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:40:33] 2025-06-03 17:40:23,338 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:40:33] 2025-06-03 17:40:23,338 | INFO     | update_server=False
[2025-06-03 13:40:33] 2025-06-03 17:40:23,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:40:33] 2025-06-03 17:40:23,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:40:33] 2025-06-03 17:40:23,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:33] 2025-06-03 17:40:23,339 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:40:33] 2025-06-03 17:40:23,339 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:40:33] 2025-06-03 17:40:23,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:40:33] 2025-06-03 17:40:23,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:40:33] 2025-06-03 17:40:23,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:40:33] 2025-06-03 17:40:23,745 | INFO     | all job control threads have been joined
[2025-06-03 13:40:33] 2025-06-03 17:40:23,930 | INFO     | all payload control threads have been joined
[2025-06-03 13:40:33] 2025-06-03 17:40:23,961 | INFO     | all data control threads have been joined
[2025-06-03 13:40:33] 2025-06-03 17:40:24,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:33] 2025-06-03 17:40:24,333 | INFO     | aborting loop
[2025-06-03 13:40:33] 2025-06-03 17:40:24,343 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,344 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,509 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,613 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,750 | INFO     | [job] control thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,931 | INFO     | [payload] control thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,966 | INFO     | [data] control thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:24,977 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,338 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,344 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,510 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,582 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,717 | INFO     | [job] validate thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:25,743 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:27,633 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:40:33] 2025-06-03 17:40:27,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782515603264)>', '<ExcThread(monitor, started 139782151710464)>']
[2025-06-03 13:40:33] 2025-06-03 17:40:28,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:40:33] 2025-06-03 17:40:28,363 | INFO     | [monitor] control thread has ended
[2025-06-03 13:40:33] 2025-06-03 17:40:32,772 | INFO     | all workflow threads have been joined
[2025-06-03 13:40:33] 2025-06-03 17:40:32,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:40:33] 2025-06-03 17:40:32,773 | INFO     | traces error code: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:32,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:40:33] 2025-06-03 17:40:32,882 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:40:33] 2025-06-03 17:40:32,885 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:40:33] 2025-06-03 17:40:32,887 [wrapper] pilotpid: 565949
[2025-06-03 13:40:33] 2025-06-03 17:40:32,889 [wrapper] Pilot exit status: 0
[2025-06-03 13:40:33] 2025-06-03 17:40:32,899 [wrapper] pandaids: 6677635304
[2025-06-03 13:40:33] 2025-06-03 17:40:32,947 [wrapper] cleanup supervisor_pilot  777802 565950
[2025-06-03 13:40:33] 2025-06-03 17:40:32,949 [wrapper] Test setup, not cleaning
[2025-06-03 13:40:33] 2025-06-03 17:40:32,952 [wrapper] apfmon messages muted
[2025-06-03 13:40:33] 2025-06-03 17:40:32,955 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:40:33] 2025-06-03 17:40:32,957 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:40:33]  *** Error codes and diagnostics ***
[2025-06-03 13:40:33]     "exeErrorCode": 0,
[2025-06-03 13:40:33]     "exeErrorDiag": "",
[2025-06-03 13:40:33]     "pilotErrorCode": 0,
[2025-06-03 13:40:33]     "pilotErrorDiag": "",
[2025-06-03 13:40:33]  *** Listing of results directory ***
[2025-06-03 13:40:33] total 391292
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:31 queuedata.json
[2025-06-03 13:40:33] -rwx------. 1 boincer umatlas     37140 Jun  3 09:31 runpilot2-wrapper.sh
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:40:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:12 run_atlas
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:12 job.xml
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas 216883932 Jun  3 12:12 EVNT.45006593._001365.pool.root.1
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:12 start_atlas.sh
[2025-06-03 13:40:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:12 shared
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:12 input.tar.gz
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:12 boinc_lockfile
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:12 pandaJob.out
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas    983735 Jun  3 12:12 agis_schedconf.cvmfs.json
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:40:33] drwx------. 4 boincer umatlas      4096 Jun  3 12:12 pilot3
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 13:38 init_data.xml
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:39 boinc_task_state.xml
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas 178295001 Jun  3 13:39 HITS.45006595._033950.pool.root.1
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas        95 Jun  3 13:40 pilot_heartbeat.json
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas      1032 Jun  3 13:40 memory_monitor_summary.json
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas    323637 Jun  3 13:40 log.45006595._033950.job.log.tgz.1
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas      7708 Jun  3 13:40 heartbeat.json
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:40 wrapper_checkpoint.txt
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:40 boinc_mmap_file
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas      4476 Jun  3 13:40 pilotlog.txt
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas    511664 Jun  3 13:40 log.45006595._033950.job.log.1
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas       357 Jun  3 13:40 output.list
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:40 runtime_log
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas    849920 Jun  3 13:40 result.tar.gz
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 13:40 runtime_log.err
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas       648 Jun  3 13:40 PcNODmMvgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYMkKDmQ3xlsn.diag
[2025-06-03 13:40:33] -rw-r--r--. 1 boincer umatlas     21233 Jun  3 13:40 stderr.txt
[2025-06-03 13:40:33] HITS file was successfully produced:
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas 178295001 Jun  3 13:39 shared/HITS.pool.root.1
[2025-06-03 13:40:33]  *** Contents of shared directory: ***
[2025-06-03 13:40:33] total 387276
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas 216883932 Jun  3 12:12 ATLAS.root_0
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:12 start_atlas.sh
[2025-06-03 13:40:33] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 12:12 input.tar.gz
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas 178295001 Jun  3 13:39 HITS.pool.root.1
[2025-06-03 13:40:33] -rw-------. 1 boincer umatlas    849920 Jun  3 13:40 result.tar.gz
13:40:34 (562378): run_atlas exited; CPU time 35519.181050
13:40:34 (562378): called boinc_finish(0)

</stderr_txt>
]]>

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