Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:08:56 (2669360): wrapper (7.7.26015): starting
12:08:56 (2669360): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:08:56] Arguments: --nthreads 8
[2025-06-03 12:08:56] Threads: 8
[2025-06-03 12:08:56] Checking for CVMFS
[2025-06-03 12:08:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:08:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:08:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:08:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:08:57] 2.12.6.0 4122838 22069 426444 146748 2 197 22480096 32935937 4245 16776704 0 61300785 99.622 74452001 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:08:57] CVMFS is ok
[2025-06-03 12:08:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:08:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:08:57] Further information can be found at the LHC@home message board.
[2025-06-03 12:08:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:08:57] Checking for apptainer binary...
[2025-06-03 12:08:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:08:57] Running /usr/bin/apptainer --version
[2025-06-03 12:08:57] apptainer version 1.4.1-1.el9
[2025-06-03 12:08:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:08:57] c6-6-39-3.aglt2.org
[2025-06-03 12:08:57] apptainer works
[2025-06-03 12:08:57] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:08:57] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:08:57] Starting ATLAS job with PandaID=6677676480
[2025-06-03 12:08:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:18:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:18:42]  is_tar=False
[2025-06-03 13:18:42]  lfn=log.45006595._036604.job.log.tgz.1
[2025-06-03 13:18:42]  mtime=0
[2025-06-03 13:18:42]  protocol_id=None
[2025-06-03 13:18:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:18:42]  replicas=None
[2025-06-03 13:18:42]  scope=mc23_13p6TeV
[2025-06-03 13:18:42]  status=None
[2025-06-03 13:18:42]  status_code=0
[2025-06-03 13:18:42]  storage_token=
[2025-06-03 13:18:42]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677676480/log.45006595._036604.job.log.tgz.1
[2025-06-03 13:18:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/f0/log.45006595._036604.job.log.tgz.1
[2025-06-03 13:18:42]  workdir=None
[2025-06-03 13:18:42] ]
[2025-06-03 13:18:42] 2025-06-03 17:18:13,001 | INFO     | transferring file log.45006595._036604.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677676480/log.45006595._036604.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:18:42] 2025-06-03 17:18:13,001 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677676480/log.45006595._036604.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._036604.job
[2025-06-03 13:18:42] 2025-06-03 17:18:13,019 | INFO     | adding to output.list: log.45006595._036604.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/f0/log.45006595._036604.job.log.tg
[2025-06-03 13:18:42] 2025-06-03 17:18:13,020 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:18:42] 2025-06-03 17:18:13,020 | INFO     | summary of transferred files:
[2025-06-03 13:18:42] 2025-06-03 17:18:13,020 | INFO     |  -- lfn=log.45006595._036604.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:18:42] 2025-06-03 17:18:13,020 | INFO     | stage-out finished correctly
[2025-06-03 13:18:42] 2025-06-03 17:18:16,072 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:18:42] 2025-06-03 17:18:16,155 | INFO     | 4152s have passed since pilot start - server update state is 'RUNNING'
[2025-06-03 13:18:42] 2025-06-03 17:18:18,717 | INFO     | job 6677676480 has state=finished
[2025-06-03 13:18:42] 2025-06-03 17:18:18,717 | INFO     | preparing for final server update for job 6677676480 in state='finished'
[2025-06-03 13:18:42] 2025-06-03 17:18:18,717 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:18:42] 2025-06-03 17:18:18,717 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:18:42] 2025-06-03 17:18:18,718 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:18:42] 2025-06-03 17:18:18,718 | INFO     | job 6677676480 has finished - writing final server update
[2025-06-03 13:18:42] 2025-06-03 17:18:18,718 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:18:42] 2025-06-03 17:18:18,733 | INFO     | executing command: lscpu
[2025-06-03 13:18:42] 2025-06-03 17:18:18,797 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:18:42] 2025-06-03 17:18:19,030 | WARNING  | process 2691320 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 13:18:42] 2025-06-03 17:18:19,030 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677676480/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:18:42] 2025-06-03 17:18:19,269 | INFO     | number of running child processes to parent process 2691320: 1
[2025-06-03 13:18:42] 2025-06-03 17:18:19,269 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:18:42] 2025-06-03 17:18:21,771 | INFO     | monitor loop #311: job 0:6677676480 is in state 'finished'
[2025-06-03 13:18:42] 2025-06-03 17:18:21,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,496 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:18:42] 2025-06-03 17:18:22,496 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677676480/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,497 | INFO     | extracted standard info from prmon json
[2025-06-03 13:18:42] 2025-06-03 17:18:22,497 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:18:42] 2025-06-03 17:18:22,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:18:42] 2025-06-03 17:18:22,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:18:42] 2025-06-03 17:18:22,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:18:42] 2025-06-03 17:18:22,499 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:18:42] 2025-06-03 17:18:22,499 | INFO     | sum of square deviations: 70364110.0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | sum of deviations: 8767231283.0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | mean x: 1748969106.0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | mean y: 2134340.180327869
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | -- intersect: -217916015397.28873
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | intersect: -217916015397.28873
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | chi2: 0.9854493085940774
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | -- intersect: -217916015397.28873
[2025-06-03 13:18:42] 2025-06-03 17:18:22,500 | INFO     | current memory leak: 124.60 B/s (using 61 data points, chi2=0.99)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | ..............................
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . Timing measurements:
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . get job = 0 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . initial setup = 2 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . payload setup = 5 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . stage-in = 0 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . payload execution = 4121 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . stage-out = 0 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | . log creation = 0 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,501 | INFO     | ..............................
[2025-06-03 13:18:42] 2025-06-03 17:18:22,749 | INFO     | 
[2025-06-03 13:18:42] 2025-06-03 17:18:22,749 | INFO     | job summary report
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | --------------------------------------------------
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | PanDA job id: 6677676480
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | task id: 45006595
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | errors: (none)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | pilot state: finished 
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | transexitcode: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | exeerrorcode: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | exeerrordiag: 
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | exitcode: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | exitmsg: OK
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | cpuconsumptiontime: 27899 s
[2025-06-03 13:18:42] 2025-06-03 17:18:22,750 | INFO     | nevents: 400
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | neventsw: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | pid: 2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | pgrp: 2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | corecount: 8
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | event service: False
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | sizes: {0: 2405181, 4: 2405387, 11: 2405415, 4131: 2431214, 4132: 2440155, 4135: 2440211, 4142: 2440509}
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | --------------------------------------------------
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | 
[2025-06-03 13:18:42] 2025-06-03 17:18:22,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:18:42] 2025-06-03 17:18:22,771 | INFO     | job 6677676480 has completed (purged errors)
[2025-06-03 13:18:42] 2025-06-03 17:18:22,771 | INFO     | overall cleanup function is called
[2025-06-03 13:18:42] 2025-06-03 17:18:23,778 | INFO     | --- collectZombieJob: --- 10, [2691320]
[2025-06-03 13:18:42] 2025-06-03 17:18:23,779 | INFO     | zombie collector waiting for pid 2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:23,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:18:42] 2025-06-03 17:18:23,779 | INFO     | collected zombie processes
[2025-06-03 13:18:42] 2025-06-03 17:18:23,779 | INFO     | will attempt to kill all subprocesses of pid=2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:24,003 | INFO     | process IDs to be killed: [2691320] (in reverse order)
[2025-06-03 13:18:42] 2025-06-03 17:18:24,077 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:18:42] 2025-06-03 17:18:24,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:18:42] 2025-06-03 17:18:24,085 | INFO     | did not find any defunct processes belonging to 2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:24,092 | INFO     | did not find any defunct processes belonging to 2691320
[2025-06-03 13:18:42] 2025-06-03 17:18:24,093 | INFO     | ready for new job
[2025-06-03 13:18:42] 2025-06-03 17:18:24,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:18:42] 2025-06-03 17:18:24,094 | INFO     | **************************************
[2025-06-03 13:18:42] 2025-06-03 17:18:24,094 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:18:42] 2025-06-03 17:18:24,094 | INFO     | **************************************
[2025-06-03 13:18:42] 2025-06-03 17:18:24,094 | INFO     | 
[2025-06-03 13:18:42] 2025-06-03 17:18:24,109 | INFO     | architecture information:
[2025-06-03 13:18:42] 2025-06-03 17:18:24,109 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:18:42] 2025-06-03 17:18:24,123 | INFO     | cat /etc/os-release:
[2025-06-03 13:18:42] NAME="CentOS Linux"
[2025-06-03 13:18:42] VERSION="7 (Core)"
[2025-06-03 13:18:42] ID="centos"
[2025-06-03 13:18:42] ID_LIKE="rhel fedora"
[2025-06-03 13:18:42] VERSION_ID="7"
[2025-06-03 13:18:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:18:42] ANSI_COLOR="0;31"
[2025-06-03 13:18:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:18:42] HOME_URL="https://www.centos.org/"
[2025-06-03 13:18:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:18:42] 
[2025-06-03 13:18:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:18:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:18:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:18:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:18:42] 
[2025-06-03 13:18:42] 2025-06-03 17:18:24,123 | INFO     | **************************************
[2025-06-03 13:18:42] 2025-06-03 17:18:24,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 13:18:42] 2025-06-03 17:18:24,641 | INFO     | sufficient remaining disk space (72992423936 B)
[2025-06-03 13:18:42] 2025-06-03 17:18:24,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:18:42] 2025-06-03 17:18:24,642 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:18:42] 2025-06-03 17:18:24,642 | INFO     | update_server=False
[2025-06-03 13:18:42] 2025-06-03 17:18:24,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:18:42] 2025-06-03 17:18:24,759 | INFO     | all job control threads have been joined
[2025-06-03 13:18:42] 2025-06-03 17:18:25,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:18:42] 2025-06-03 17:18:25,279 | INFO     | aborting loop
[2025-06-03 13:18:42] 2025-06-03 17:18:25,468 | INFO     | PID=2675128 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 13:18:42] 2025-06-03 17:18:25,468 | INFO     | .. there are 8 such processes running
[2025-06-03 13:18:42] 2025-06-03 17:18:25,469 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:18:42] 2025-06-03 17:18:25,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:18:42] 2025-06-03 17:18:25,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:18:42] 2025-06-03 17:18:25,530 | INFO     | all payload control threads have been joined
[2025-06-03 13:18:42] 2025-06-03 17:18:25,637 | INFO     | all data control threads have been joined
[2025-06-03 13:18:42] 2025-06-03 17:18:25,647 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:25,765 | INFO     | [job] control thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:25,830 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,122 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:18:42] 2025-06-03 17:18:26,280 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,536 | INFO     | [payload] control thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,577 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,637 | INFO     | [data] control thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:18:42] 2025-06-03 17:18:26,751 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:26,778 | INFO     | [job] validate thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:27,104 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:27,169 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:27,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:18:42] 2025-06-03 17:18:28,131 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:28,603 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:30,669 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:35,634 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:18:42] 2025-06-03 17:18:36,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:18:42] 2025-06-03 17:18:37,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280361342784)>', '<ExcThread(monitor, started 140279579395840)>']
[2025-06-03 13:18:42] 2025-06-03 17:18:37,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:18:42] 2025-06-03 17:18:37,524 | INFO     | [monitor] control thread has ended
[2025-06-03 13:18:42] 2025-06-03 17:18:42,496 | INFO     | all workflow threads have been joined
[2025-06-03 13:18:42] 2025-06-03 17:18:42,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:18:42] 2025-06-03 17:18:42,496 | INFO     | traces error code: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:42,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:18:42] 2025-06-03 17:18:42,606 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:18:42] 2025-06-03 17:18:42,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:18:42] 2025-06-03 17:18:42,611 [wrapper] pilotpid: 2675128
[2025-06-03 13:18:42] 2025-06-03 17:18:42,613 [wrapper] Pilot exit status: 0
[2025-06-03 13:18:42] 2025-06-03 17:18:42,621 [wrapper] pandaids: 6677676480
[2025-06-03 13:18:42] 2025-06-03 17:18:42,670 [wrapper] cleanup supervisor_pilot 2889694 2675129
[2025-06-03 13:18:42] 2025-06-03 17:18:42,672 [wrapper] Test setup, not cleaning
[2025-06-03 13:18:42] 2025-06-03 17:18:42,675 [wrapper] apfmon messages muted
[2025-06-03 13:18:42] 2025-06-03 17:18:42,677 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:18:42] 2025-06-03 17:18:42,679 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:18:42]  *** Error codes and diagnostics ***
[2025-06-03 13:18:42]     "exeErrorCode": 0,
[2025-06-03 13:18:42]     "exeErrorDiag": "",
[2025-06-03 13:18:42]     "pilotErrorCode": 0,
[2025-06-03 13:18:42]     "pilotErrorDiag": "",
[2025-06-03 13:18:42]  *** Listing of results directory ***
[2025-06-03 13:18:42] total 397668
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:04 queuedata.json
[2025-06-03 13:18:42] -rwx------. 1 boincer umatlas     37140 Jun  3 11:05 runpilot2-wrapper.sh
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:18:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:08 run_atlas
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:08 job.xml
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas 215909907 Jun  3 12:08 EVNT.45006593._001471.pool.root.1
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:08 start_atlas.sh
[2025-06-03 13:18:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:08 shared
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 12:08 input.tar.gz
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:08 boinc_lockfile
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas      2523 Jun  3 12:08 pandaJob.out
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas    983735 Jun  3 12:09 agis_schedconf.cvmfs.json
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:18:42] drwx------. 4 boincer umatlas      4096 Jun  3 12:09 pilot3
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas      6840 Jun  3 13:10 init_data.xml
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas 186048874 Jun  3 13:17 HITS.45006595._036604.pool.root.1
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:17 boinc_task_state.xml
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas      1034 Jun  3 13:18 memory_monitor_summary.json
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas        95 Jun  3 13:18 pilot_heartbeat.json
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas    289311 Jun  3 13:18 log.45006595._036604.job.log.tgz.1
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas      7710 Jun  3 13:18 heartbeat.json
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:18 boinc_mmap_file
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:18 wrapper_checkpoint.txt
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas      4820 Jun  3 13:18 pilotlog.txt
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas    418272 Jun  3 13:18 log.45006595._036604.job.log.1
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas       357 Jun  3 13:18 output.list
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:18 runtime_log
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas    727040 Jun  3 13:18 result.tar.gz
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas       651 Jun  3 13:18 SeEMDm9Nig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMkkKDmXYAcym.diag
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 13:18 runtime_log.err
[2025-06-03 13:18:42] -rw-r--r--. 1 boincer umatlas     21557 Jun  3 13:18 stderr.txt
[2025-06-03 13:18:42] HITS file was successfully produced:
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas 186048874 Jun  3 13:17 shared/HITS.pool.root.1
[2025-06-03 13:18:42]  *** Contents of shared directory: ***
[2025-06-03 13:18:42] total 393776
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas 215909907 Jun  3 12:08 ATLAS.root_0
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:08 start_atlas.sh
[2025-06-03 13:18:42] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 12:08 input.tar.gz
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas 186048874 Jun  3 13:17 HITS.pool.root.1
[2025-06-03 13:18:42] -rw-------. 1 boincer umatlas    727040 Jun  3 13:18 result.tar.gz
13:18:44 (2669360): run_atlas exited; CPU time 27997.435761
13:18:44 (2669360): called boinc_finish(0)

</stderr_txt>
]]>

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