Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:59 (2785538): wrapper (7.7.26015): starting
11:12:59 (2785538): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:12:59] Arguments: --nthreads 4
[2025-06-05 11:12:59] Threads: 4
[2025-06-05 11:12:59] Checking for CVMFS
[2025-06-05 11:12:59] No cvmfs_config command found, will try listing directly
[2025-06-05 11:12:59] CVMFS is ok
[2025-06-05 11:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:12:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:12:59] Further information can be found at the LHC@home message board.
[2025-06-05 11:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:12:59] Checking for apptainer binary...
[2025-06-05 11:12:59] which: no apptainer in ((null))
[2025-06-05 11:12:59] apptainer is not installed, using version from CVMFS
[2025-06-05 11:12:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:12:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-05 11:12:59] apptainer works
[2025-06-05 11:12:59] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:12:59] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:12:59] Starting ATLAS job with PandaID=6677620877
[2025-06-05 11:12:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:10:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:10:06] 2025-06-05 11:59:17,040 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:10:06] 2025-06-05 11:59:17,044 | INFO     | executing command: lscpu
[2025-06-05 14:10:06] 2025-06-05 11:59:17,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:10:06] 2025-06-05 11:59:18,346 | INFO     | monitor loop #726: job 0:6677620877 is in state 'finished'
[2025-06-05 14:10:06] 2025-06-05 11:59:18,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:10:06] 2025-06-05 11:59:20,848 | INFO     | monitor loop #727: job 0:6677620877 is in state 'finished'
[2025-06-05 14:10:06] 2025-06-05 11:59:20,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:10:06] 2025-06-05 11:59:21,989 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 14:10:06] 2025-06-05 11:59:21,990 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6677620877/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:10:06] 2025-06-05 11:59:21,990 | INFO     | extracted standard info from prmon json
[2025-06-05 14:10:06] 2025-06-05 11:59:21,991 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:10:06] 2025-06-05 11:59:21,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:10:06] 2025-06-05 11:59:21,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:10:06] 2025-06-05 11:59:21,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:10:06] 2025-06-05 11:59:21,995 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:10:06] 2025-06-05 11:59:21,996 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | sum of deviations: 16372197113.999998
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | mean x: 1749119761.0
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | mean y: 2312222.656441718
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | -- intersect: -21323305509.34982
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | intersect: -21323305509.34982
[2025-06-05 14:10:06] 2025-06-05 11:59:21,997 | INFO     | chi2: 1.831651969234602
[2025-06-05 14:10:06] 2025-06-05 11:59:21,998 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 14:10:06] 2025-06-05 11:59:21,999 | INFO     | sum of deviations: 16088288230.000004
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | mean x: 1749119608.5
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | mean y: 2311861.2025316455
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | -- intersect: -23006651846.57602
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | intersect: -23006651846.57602
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | chi2: 1.833756498643685
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | current chi2=1.833756498643685 (change=-0.11489788695842292 %)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,000 | INFO     | right removable region: 157
[2025-06-05 14:10:06] 2025-06-05 11:59:22,001 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 14:10:06] 2025-06-05 11:59:22,002 | INFO     | sum of deviations: -11772365844.0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,002 | INFO     | mean x: 1749119913.5
[2025-06-05 14:10:06] 2025-06-05 11:59:22,002 | INFO     | mean y: 2347651.075949367
[2025-06-05 14:10:06] 2025-06-05 11:59:22,002 | INFO     | -- intersect: 16838817872.11016
[2025-06-05 14:10:06] 2025-06-05 11:59:22,002 | INFO     | intersect: 16838817872.11016
[2025-06-05 14:10:06] 2025-06-05 11:59:22,003 | INFO     | chi2: 0.023507671790791603
[2025-06-05 14:10:06] 2025-06-05 11:59:22,003 | INFO     | current chi2=0.023507671790791603 (change=98.71658632831787 %)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,003 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,004 | INFO     | sum of deviations: -11900438027.999998
[2025-06-05 14:10:06] 2025-06-05 11:59:22,004 | INFO     | mean x: 1749120066.0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,004 | INFO     | mean y: 2347808.418300654
[2025-06-05 14:10:06] 2025-06-05 11:59:22,004 | INFO     | -- intersect: 18745749192.656254
[2025-06-05 14:10:06] 2025-06-05 11:59:22,004 | INFO     | intersect: 18745749192.656254
[2025-06-05 14:10:06] 2025-06-05 11:59:22,005 | INFO     | chi2: 0.019978604593077317
[2025-06-05 14:10:06] 2025-06-05 11:59:22,005 | INFO     | current chi2=0.019978604593077317 (change=15.012406286430663 %)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,005 | INFO     | left removable region: 20
[2025-06-05 14:10:06] 2025-06-05 11:59:22,005 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | sum of deviations: -9322465726.999994
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | mean x: 1749120188.0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | mean y: 2345662.1459854012
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | -- intersect: 20454236304.336502
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | intersect: 20454236304.336502
[2025-06-05 14:10:06] 2025-06-05 11:59:22,006 | INFO     | chi2: 0.018830537842037816
[2025-06-05 14:10:06] 2025-06-05 11:59:22,007 | INFO     | -- intersect: 20454236304.336502
[2025-06-05 14:10:06] 2025-06-05 11:59:22,007 | INFO     | current memory leak: -11.69 B/s (using 137 data points, chi2=0.02)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,007 | INFO     | ..............................
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . Timing measurements:
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . get job = 0 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . initial setup = 1 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . payload setup = 8 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . stage-in = 0 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . payload execution = 9934 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . stage-out = 0 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | . log creation = 0 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,008 | INFO     | ..............................
[2025-06-05 14:10:06] 2025-06-05 11:59:22,363 | INFO     | 
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | job summary report
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | --------------------------------------------------
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | PanDA job id: 6677620877
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | task id: 45006595
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | errors: (none)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | pilot state: finished 
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | transexitcode: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | exeerrorcode: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,364 | INFO     | exeerrordiag: 
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | exitcode: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | exitmsg: OK
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | cpuconsumptiontime: 37861 s
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | nevents: 400
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | neventsw: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | pid: 2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | pgrp: 2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | corecount: 4
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | event service: False
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 12: 2397615, 9946: 2425904, 9947: 2434867, 9950: 2435051, 9956: 2435221}
[2025-06-05 14:10:06] 2025-06-05 11:59:22,365 | INFO     | --------------------------------------------------
[2025-06-05 14:10:06] 2025-06-05 11:59:22,366 | INFO     | 
[2025-06-05 14:10:06] 2025-06-05 11:59:22,366 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-05 14:10:06] 2025-06-05 11:59:22,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:10:06] 2025-06-05 11:59:22,392 | INFO     | job 6677620877 has completed (purged errors)
[2025-06-05 14:10:06] 2025-06-05 11:59:22,392 | INFO     | overall cleanup function is called
[2025-06-05 14:10:06] 2025-06-05 11:59:23,399 | INFO     | --- collectZombieJob: --- 10, [2796220]
[2025-06-05 14:10:06] 2025-06-05 11:59:23,400 | INFO     | zombie collector waiting for pid 2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:23,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:10:06] 2025-06-05 11:59:23,400 | INFO     | collected zombie processes
[2025-06-05 14:10:06] 2025-06-05 11:59:23,400 | INFO     | will attempt to kill all subprocesses of pid=2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:23,788 | INFO     | process IDs to be killed: [2796220] (in reverse order)
[2025-06-05 14:10:06] 2025-06-05 11:59:23,914 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:10:06] 2025-06-05 11:59:23,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:10:06] 2025-06-05 11:59:23,927 | INFO     | did not find any defunct processes belonging to 2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:23,941 | INFO     | did not find any defunct processes belonging to 2796220
[2025-06-05 14:10:06] 2025-06-05 11:59:23,941 | INFO     | ready for new job
[2025-06-05 14:10:06] 2025-06-05 11:59:23,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:10:06] 2025-06-05 11:59:23,944 | INFO     | **************************************
[2025-06-05 14:10:06] 2025-06-05 11:59:23,945 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:10:06] 2025-06-05 11:59:23,945 | INFO     | **************************************
[2025-06-05 14:10:06] 2025-06-05 11:59:23,945 | INFO     | 
[2025-06-05 14:10:06] 2025-06-05 11:59:23,949 | INFO     | architecture information:
[2025-06-05 14:10:06] 2025-06-05 11:59:23,950 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:10:06] 2025-06-05 11:59:23,967 | INFO     | cat /etc/os-release:
[2025-06-05 14:10:06] NAME="CentOS Linux"
[2025-06-05 14:10:06] VERSION="7 (Core)"
[2025-06-05 14:10:06] ID="centos"
[2025-06-05 14:10:06] ID_LIKE="rhel fedora"
[2025-06-05 14:10:06] VERSION_ID="7"
[2025-06-05 14:10:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:10:06] ANSI_COLOR="0;31"
[2025-06-05 14:10:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:10:06] HOME_URL="https://www.centos.org/"
[2025-06-05 14:10:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:10:06] 
[2025-06-05 14:10:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:10:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:10:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:10:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:10:06] 
[2025-06-05 14:10:06] 2025-06-05 11:59:23,968 | INFO     | **************************************
[2025-06-05 14:10:06] 2025-06-05 11:59:24,471 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-05 14:10:06] 2025-06-05 11:59:24,488 | INFO     | sufficient remaining disk space (671376998400 B)
[2025-06-05 14:10:06] 2025-06-05 11:59:24,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:10:06] 2025-06-05 11:59:24,489 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:10:06] 2025-06-05 11:59:24,489 | INFO     | update_server=False
[2025-06-05 14:10:06] 2025-06-05 11:59:24,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:10:06] 2025-06-05 11:59:24,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:10:06] 2025-06-05 11:59:24,490 | INFO     | aborting loop
[2025-06-05 14:10:06] 2025-06-05 11:59:24,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:10:06] 2025-06-05 11:59:24,490 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:10:06] 2025-06-05 11:59:24,490 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:10:06] 2025-06-05 11:59:24,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:10:06] 2025-06-05 11:59:24,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:10:06] 2025-06-05 11:59:24,820 | INFO     | all data control threads have been joined
[2025-06-05 14:10:06] 2025-06-05 11:59:24,823 | INFO     | all payload control threads have been joined
[2025-06-05 14:10:06] 2025-06-05 11:59:25,490 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,491 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,623 | INFO     | all job control threads have been joined
[2025-06-05 14:10:06] 2025-06-05 11:59:25,726 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,826 | INFO     | [data] control thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,829 | INFO     | [payload] control thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,915 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:25,980 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,198 | INFO     | [job] validate thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,312 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,496 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,625 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,629 | INFO     | [job] control thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:26,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:10:06] 2025-06-05 11:59:26,639 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:27,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:10:06] 2025-06-05 11:59:28,127 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:30,641 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:10:06] 2025-06-05 11:59:31,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22457980917568)>', '<ExcThread(monitor, started 22457742227200)>']
[2025-06-05 14:10:06] 2025-06-05 11:59:31,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:10:06] 2025-06-05 11:59:31,517 | INFO     | [monitor] control thread has ended
[2025-06-05 14:10:06] 2025-06-05 11:59:36,221 | INFO     | all workflow threads have been joined
[2025-06-05 14:10:06] 2025-06-05 11:59:36,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:10:06] 2025-06-05 11:59:36,221 | INFO     | traces error code: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:36,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:10:06] 2025-06-05 11:59:36,381 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:10:06] 2025-06-05 11:59:36,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:10:06] 2025-06-05 11:59:36,387 [wrapper] pilotpid: 2789266
[2025-06-05 14:10:06] 2025-06-05 11:59:36,390 [wrapper] Pilot exit status: 0
[2025-06-05 14:10:06] 2025-06-05 11:59:36,403 [wrapper] pandaids: 6677620877
[2025-06-05 14:10:06] 2025-06-05 11:59:36,479 [wrapper] cleanup supervisor_pilot 3089958 2789267
[2025-06-05 14:10:06] 2025-06-05 11:59:36,483 [wrapper] Test setup, not cleaning
[2025-06-05 14:10:06] 2025-06-05 11:59:36,486 [wrapper] apfmon messages muted
[2025-06-05 14:10:06] 2025-06-05 11:59:36,489 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:10:06] 2025-06-05 11:59:36,492 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:10:06]  *** Error codes and diagnostics ***
[2025-06-05 14:10:06]     "exeErrorCode": 0,
[2025-06-05 14:10:06]     "exeErrorDiag": "",
[2025-06-05 14:10:06]     "pilotErrorCode": 0,
[2025-06-05 14:10:06]     "pilotErrorDiag": "",
[2025-06-05 14:10:06]  *** Listing of results directory ***
[2025-06-05 14:10:06] total 392936
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:05 queuedata.json
[2025-06-05 14:10:06] -rwx------ 1 boinc boinc     37140 Jun  3 15:05 runpilot2-wrapper.sh
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:10:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:12 run_atlas
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:12 job.xml
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc 213537690 Jun  5 11:12 EVNT.45006593._001335.pool.root.1
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc      6632 Jun  5 11:12 init_data.xml
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 14:10:06] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:12 shared
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc    508881 Jun  5 11:12 input.tar.gz
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:12 boinc_lockfile
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc      2525 Jun  5 11:12 pandaJob.out
[2025-06-05 14:10:06] -rw------- 1 boinc boinc    983281 Jun  5 11:13 agis_schedconf.cvmfs.json
[2025-06-05 14:10:06] -rw------- 1 boinc boinc   1598969 Jun  5 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:10:06] drwx------ 4 boinc boinc      4096 Jun  5 11:13 pilot3
[2025-06-05 14:10:06] -rw------- 1 boinc boinc 182537391 Jun  5 13:58 HITS.45006595._033171.pool.root.1
[2025-06-05 14:10:06] -rw------- 1 boinc boinc        95 Jun  5 13:58 pilot_heartbeat.json
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc       529 Jun  5 13:58 boinc_task_state.xml
[2025-06-05 14:10:06] -rw------- 1 boinc boinc      1036 Jun  5 13:59 memory_monitor_summary.json
[2025-06-05 14:10:06] -rw------- 1 boinc boinc    287387 Jun  5 13:59 log.45006595._033171.job.log.tgz.1
[2025-06-05 14:10:06] -rw------- 1 boinc boinc      7724 Jun  5 13:59 heartbeat.json
[2025-06-05 14:10:06] -rw------- 1 boinc boinc      4486 Jun  5 13:59 pilotlog.txt
[2025-06-05 14:10:06] -rw------- 1 boinc boinc    938150 Jun  5 13:59 log.45006595._033171.job.log.1
[2025-06-05 14:10:06] -rw------- 1 boinc boinc       357 Jun  5 13:59 output.list
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:59 runtime_log
[2025-06-05 14:10:06] -rw------- 1 boinc boinc   1249280 Jun  5 13:59 result.tar.gz
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc      9025 Jun  5 13:59 runtime_log.err
[2025-06-05 14:10:06] -rw------- 1 boinc boinc       662 Jun  5 13:59 TYVKDmbVgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOEkKDm1boGbm.diag
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc        26 Jun  5 14:09 wrapper_checkpoint.txt
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc      8192 Jun  5 14:10 boinc_mmap_file
[2025-06-05 14:10:06] -rw-r--r-- 1 boinc boinc     20942 Jun  5 14:10 stderr.txt
[2025-06-05 14:10:06] HITS file was successfully produced:
[2025-06-05 14:10:06] -rw------- 1 boinc boinc 182537391 Jun  5 13:58 shared/HITS.pool.root.1
[2025-06-05 14:10:06]  *** Contents of shared directory: ***
[2025-06-05 14:10:06] total 388540
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc 213537690 Jun  5 11:12 ATLAS.root_0
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 14:10:06] -rw-r--r-- 2 boinc boinc    508881 Jun  5 11:12 input.tar.gz
[2025-06-05 14:10:06] -rw------- 1 boinc boinc 182537391 Jun  5 13:58 HITS.pool.root.1
[2025-06-05 14:10:06] -rw------- 1 boinc boinc   1249280 Jun  5 13:59 result.tar.gz
14:10:08 (2785538): run_atlas exited; CPU time 38240.307985
14:10:08 (2785538): called boinc_finish(0)

</stderr_txt>
]]>

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