Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:55 (30246): wrapper (7.7.26015): starting
02:49:55 (30246): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:49:55] Arguments: --nthreads 8
[2025-06-04 02:49:55] Threads: 8
[2025-06-04 02:49:55] Checking for CVMFS
[2025-06-04 02:49:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:49:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:49:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:49:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:49:57] 2.11.2.0 3740 32655 99168 146762 1 210 19762474 25165825 3960 130560 0 17761163 99.810 18910037 2207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:49:57] CVMFS is ok
[2025-06-04 02:49:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:49:57] Checking for apptainer binary...
[2025-06-04 02:49:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:49:57] Running /usr/bin/apptainer --version
[2025-06-04 02:49:57] apptainer version 1.3.2-1.el7
[2025-06-04 02:49:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:50:20] cg-vwn234.simple-grid.lan
[2025-06-04 02:50:20] apptainer works
[2025-06-04 02:50:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:50:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:50:20] Starting ATLAS job with PandaID=6677601356
[2025-06-04 02:50:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:57:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:57:37] 2025-06-04 04:41:06,028 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6677601356/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,029 | INFO     | extracted standard info from prmon json
[2025-06-04 06:57:37] 2025-06-04 04:41:06,029 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:57:37] 2025-06-04 04:41:06,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:57:37] 2025-06-04 04:41:06,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:57:37] 2025-06-04 04:41:06,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:57:37] 2025-06-04 04:41:06,034 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:57:37] 2025-06-04 04:41:06,035 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,037 | INFO     | sum of deviations: -38115210720.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,037 | INFO     | mean x: 1749005135.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,038 | INFO     | mean y: 2516253.0089285714
[2025-06-04 06:57:37] 2025-06-04 04:41:06,038 | INFO     | -- intersect: 19130781540.13668
[2025-06-04 06:57:37] 2025-06-04 04:41:06,038 | INFO     | intersect: 19130781540.13668
[2025-06-04 06:57:37] 2025-06-04 04:41:06,038 | INFO     | chi2: 2.7219462745923733
[2025-06-04 06:57:37] 2025-06-04 04:41:06,039 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,040 | INFO     | sum of deviations: -22123683679.00001
[2025-06-04 06:57:37] 2025-06-04 04:41:06,041 | INFO     | mean x: 1749004983.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,041 | INFO     | mean y: 2526761.1598173515
[2025-06-04 06:57:37] 2025-06-04 04:41:06,041 | INFO     | -- intersect: 11883356548.428804
[2025-06-04 06:57:37] 2025-06-04 04:41:06,041 | INFO     | intersect: 11883356548.428804
[2025-06-04 06:57:37] 2025-06-04 04:41:06,041 | INFO     | chi2: 1.958481338282576
[2025-06-04 06:57:37] 2025-06-04 04:41:06,042 | INFO     | current chi2=1.958481338282576 (change=28.048493955823222 %)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,042 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,044 | INFO     | sum of deviations: -21134944530.499996
[2025-06-04 06:57:37] 2025-06-04 04:41:06,044 | INFO     | mean x: 1749004830.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,044 | INFO     | mean y: 2527452.8738317755
[2025-06-04 06:57:37] 2025-06-04 04:41:06,044 | INFO     | -- intersect: 12166680076.668728
[2025-06-04 06:57:37] 2025-06-04 04:41:06,044 | INFO     | intersect: 12166680076.668728
[2025-06-04 06:57:37] 2025-06-04 04:41:06,048 | INFO     | chi2: 1.957299845843608
[2025-06-04 06:57:37] 2025-06-04 04:41:06,048 | INFO     | current chi2=1.957299845843608 (change=0.06032696946728201 %)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,048 | INFO     | right removable region: 213
[2025-06-04 06:57:37] 2025-06-04 04:41:06,049 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,051 | INFO     | sum of deviations: -78346969000.99998
[2025-06-04 06:57:37] 2025-06-04 04:41:06,051 | INFO     | mean x: 1749005288.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,051 | INFO     | mean y: 2542918.8493150687
[2025-06-04 06:57:37] 2025-06-04 04:41:06,051 | INFO     | -- intersect: 42076330398.23784
[2025-06-04 06:57:37] 2025-06-04 04:41:06,052 | INFO     | intersect: 42076330398.23784
[2025-06-04 06:57:37] 2025-06-04 04:41:06,052 | INFO     | chi2: 1.0123812922476307
[2025-06-04 06:57:37] 2025-06-04 04:41:06,052 | INFO     | current chi2=1.0123812922476307 (change=62.80671291356621 %)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,053 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,054 | INFO     | sum of deviations: -75042277927.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,055 | INFO     | mean x: 1749005440.5
[2025-06-04 06:57:37] 2025-06-04 04:41:06,055 | INFO     | mean y: 2540579.696261682
[2025-06-04 06:57:37] 2025-06-04 04:41:06,055 | INFO     | -- intersect: 43192908976.26571
[2025-06-04 06:57:37] 2025-06-04 04:41:06,055 | INFO     | intersect: 43192908976.26571
[2025-06-04 06:57:37] 2025-06-04 04:41:06,055 | INFO     | chi2: 1.0022834264390967
[2025-06-04 06:57:37] 2025-06-04 04:41:06,056 | INFO     | current chi2=1.0022834264390967 (change=0.997437021590482 %)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,056 | INFO     | left removable region: 20
[2025-06-04 06:57:37] 2025-06-04 04:41:06,056 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,058 | INFO     | sum of deviations: -44776325686.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,058 | INFO     | mean x: 1749005410.0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,058 | INFO     | mean y: 2543672.797927461
[2025-06-04 06:57:37] 2025-06-04 04:41:06,058 | INFO     | -- intersect: 35134385115.438545
[2025-06-04 06:57:37] 2025-06-04 04:41:06,058 | INFO     | intersect: 35134385115.438545
[2025-06-04 06:57:37] 2025-06-04 04:41:06,079 | INFO     | chi2: 0.19715767889463806
[2025-06-04 06:57:37] 2025-06-04 04:41:06,079 | INFO     | -- intersect: 35134385115.438545
[2025-06-04 06:57:37] 2025-06-04 04:41:06,080 | INFO     | current memory leak: -20.09 B/s (using 193 data points, chi2=0.20)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | ..............................
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . Timing measurements:
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . get job = 0 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . initial setup = 2 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . payload setup = 17 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . stage-in = 0 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . payload execution = 13670 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . stage-out = 4 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,081 | INFO     | . log creation = 1 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,082 | INFO     | ..............................
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | 
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | job summary report
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | --------------------------------------------------
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | PanDA job id: 6677601356
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | task id: 45006595
[2025-06-04 06:57:37] 2025-06-04 04:41:06,290 | INFO     | errors: (none)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | pilot state: finished 
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | transexitcode: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | exeerrorcode: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | exeerrordiag: 
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | exitcode: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | exitmsg: OK
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | cpuconsumptiontime: 51611 s
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | nevents: 400
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | neventsw: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:06,291 | INFO     | pid: 18102
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | pgrp: 18102
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | corecount: 8
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | event service: False
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | sizes: {0: 2404958, 1: 2405213, 2: 2405213, 11: 2405447, 12: 2405475, 13692: 2435339, 13696: 2444282, 13699: 2444338, 13789: 2444508}
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | --------------------------------------------------
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | 
[2025-06-04 06:57:37] 2025-06-04 04:41:06,292 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-04 06:57:37] 2025-06-04 04:41:06,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:57:37] 2025-06-04 04:41:06,575 | INFO     | job 6677601356 has completed (purged errors)
[2025-06-04 06:57:37] 2025-06-04 04:41:06,575 | INFO     | overall cleanup function is called
[2025-06-04 06:57:37] 2025-06-04 04:41:07,584 | INFO     | --- collectZombieJob: --- 10, [18102]
[2025-06-04 06:57:37] 2025-06-04 04:41:07,584 | INFO     | zombie collector waiting for pid 18102
[2025-06-04 06:57:37] 2025-06-04 04:41:07,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:57:37] 2025-06-04 04:41:07,584 | INFO     | collected zombie processes
[2025-06-04 06:57:37] 2025-06-04 04:41:07,584 | INFO     | will attempt to kill all subprocesses of pid=18102
[2025-06-04 06:57:37] 2025-06-04 04:41:07,696 | INFO     | process IDs to be killed: [18102] (in reverse order)
[2025-06-04 06:57:37] 2025-06-04 04:41:08,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:57:37] 2025-06-04 04:41:08,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:57:37] 2025-06-04 04:41:08,302 | INFO     | did not find any defunct processes belonging to 18102
[2025-06-04 06:57:37] 2025-06-04 04:41:08,305 | INFO     | did not find any defunct processes belonging to 18102
[2025-06-04 06:57:37] 2025-06-04 04:41:08,306 | INFO     | ready for new job
[2025-06-04 06:57:37] 2025-06-04 04:41:08,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:57:37] 2025-06-04 04:41:08,308 | INFO     | **************************************
[2025-06-04 06:57:37] 2025-06-04 04:41:08,308 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:57:37] 2025-06-04 04:41:08,308 | INFO     | **************************************
[2025-06-04 06:57:37] 2025-06-04 04:41:08,308 | INFO     | 
[2025-06-04 06:57:37] 2025-06-04 04:41:08,309 | INFO     | pilot is running in a VM
[2025-06-04 06:57:37] 2025-06-04 04:41:08,309 | INFO     | architecture information:
[2025-06-04 06:57:37] 2025-06-04 04:41:08,317 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:57:37] 2025-06-04 04:41:08,602 | INFO     | cat /etc/os-release:
[2025-06-04 06:57:37] NAME="CentOS Linux"
[2025-06-04 06:57:37] VERSION="7 (Core)"
[2025-06-04 06:57:37] ID="centos"
[2025-06-04 06:57:37] ID_LIKE="rhel fedora"
[2025-06-04 06:57:37] VERSION_ID="7"
[2025-06-04 06:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:57:37] ANSI_COLOR="0;31"
[2025-06-04 06:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:57:37] HOME_URL="https://www.centos.org/"
[2025-06-04 06:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:57:37] 
[2025-06-04 06:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:57:37] 
[2025-06-04 06:57:37] 2025-06-04 04:41:08,603 | INFO     | **************************************
[2025-06-04 06:57:37] 2025-06-04 04:41:09,106 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-04 06:57:37] 2025-06-04 04:41:09,330 | INFO     | sufficient remaining disk space (496942186496 B)
[2025-06-04 06:57:37] 2025-06-04 04:41:09,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:57:37] 2025-06-04 04:41:09,330 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:57:37] 2025-06-04 04:41:09,331 | INFO     | update_server=False
[2025-06-04 06:57:37] 2025-06-04 04:41:09,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:57:37] 2025-06-04 04:41:09,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:57:37] 2025-06-04 04:41:09,332 | INFO     | aborting loop
[2025-06-04 06:57:37] 2025-06-04 04:41:09,346 | INFO     | all data control threads have been joined
[2025-06-04 06:57:37] 2025-06-04 04:41:09,460 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:57:37] 2025-06-04 04:41:09,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:57:37] 2025-06-04 04:41:09,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:57:37] 2025-06-04 04:41:09,483 | INFO     | all payload control threads have been joined
[2025-06-04 06:57:37] 2025-06-04 04:41:09,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:57:37] 2025-06-04 04:41:09,558 | INFO     | all job control threads have been joined
[2025-06-04 06:57:37] 2025-06-04 04:41:10,337 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,338 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,352 | INFO     | [data] control thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,457 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,489 | INFO     | [payload] control thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,561 | INFO     | [job] validate thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,563 | INFO     | [job] control thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:10,903 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,094 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,157 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:57:37] 2025-06-04 04:41:11,492 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,502 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,785 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:11,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:12,309 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:12,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:57:37] 2025-06-04 04:41:16,428 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:57:37] 2025-06-04 04:41:18,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228720613184)>', '<ExcThread(monitor, started 140228425656064)>']
[2025-06-04 06:57:37] 2025-06-04 04:41:18,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:57:37] 2025-06-04 04:41:18,512 | INFO     | [monitor] control thread has ended
[2025-06-04 06:57:37] 2025-06-04 04:41:23,130 | INFO     | all workflow threads have been joined
[2025-06-04 06:57:37] 2025-06-04 04:41:23,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:57:37] 2025-06-04 04:41:23,130 | INFO     | traces error code: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:23,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:57:37] 2025-06-04 04:41:23,561 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:57:37] 2025-06-04 04:41:23,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:57:37] 2025-06-04 04:41:23,719 [wrapper] pilotpid: 9508
[2025-06-04 06:57:37] 2025-06-04 04:41:23,846 [wrapper] Pilot exit status: 0
[2025-06-04 06:57:37] 2025-06-04 04:41:24,354 [wrapper] pandaids: 6677601356
[2025-06-04 06:57:37] 2025-06-04 04:41:25,314 [wrapper] cleanup supervisor_pilot 11968 9509
[2025-06-04 06:57:37] 2025-06-04 04:41:25,383 [wrapper] Test setup, not cleaning
[2025-06-04 06:57:37] 2025-06-04 04:41:25,477 [wrapper] apfmon messages muted
[2025-06-04 06:57:37] 2025-06-04 04:41:25,572 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:57:37] 2025-06-04 04:41:25,654 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:57:37]  *** Error codes and diagnostics ***
[2025-06-04 06:57:37]     "exeErrorCode": 0,
[2025-06-04 06:57:37]     "exeErrorDiag": "",
[2025-06-04 06:57:37]     "pilotErrorCode": 0,
[2025-06-04 06:57:37]     "pilotErrorDiag": "",
[2025-06-04 06:57:37]  *** Listing of results directory ***
[2025-06-04 06:57:37] total 394320
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:43 pilot3.tar.gz
[2025-06-04 06:57:37] -rwx------. 1 boinc boinc     37140 Jun  3 13:47 runpilot2-wrapper.sh
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:47 queuedata.json
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:57:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:49 run_atlas
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:49 job.xml
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc      6393 Jun  4 02:49 init_data.xml
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc 214600425 Jun  4 02:49 EVNT.45006593._001249.pool.root.1
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:49 start_atlas.sh
[2025-06-04 06:57:37] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:49 shared
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc    508875 Jun  4 02:49 input.tar.gz
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:49 boinc_lockfile
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:50 pandaJob.out
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc    986069 Jun  4 02:50 agis_schedconf.cvmfs.json
[2025-06-04 06:57:37] drwx------. 4 boinc boinc      4096 Jun  4 02:50 pilot3
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc 182187017 Jun  4 06:38 HITS.45006595._031152.pool.root.1
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:38 boinc_task_state.xml
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc      1018 Jun  4 06:39 memory_monitor_summary.json
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc   1603667 Jun  4 06:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc    391912 Jun  4 06:39 log.45006595._031152.job.log.tgz.1
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc        95 Jun  4 06:40 pilot_heartbeat.json
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc      7693 Jun  4 06:41 heartbeat.json
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc      4417 Jun  4 06:41 pilotlog.txt
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc   1192445 Jun  4 06:41 log.45006595._031152.job.log.1
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc       357 Jun  4 06:41 output.list
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:41 runtime_log
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc   1607680 Jun  4 06:41 result.tar.gz
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc       656 Jun  4 06:41 sIOLDmCIfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmirjKDm0BEaRm.diag
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc      8673 Jun  4 06:41 runtime_log.err
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:57 boinc_mmap_file
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:57 wrapper_checkpoint.txt
[2025-06-04 06:57:37] -rw-r--r--. 1 boinc boinc     20498 Jun  4 06:57 stderr.txt
[2025-06-04 06:57:37] HITS file was successfully produced:
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc 182187017 Jun  4 06:38 shared/HITS.pool.root.1
[2025-06-04 06:57:37]  *** Contents of shared directory: ***
[2025-06-04 06:57:37] total 389580
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc 214600425 Jun  4 02:49 ATLAS.root_0
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:49 start_atlas.sh
[2025-06-04 06:57:37] -rw-r--r--. 2 boinc boinc    508875 Jun  4 02:49 input.tar.gz
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc 182187017 Jun  4 06:38 HITS.pool.root.1
[2025-06-04 06:57:37] -rw-------. 1 boinc boinc   1607680 Jun  4 06:41 result.tar.gz
06:57:39 (30246): run_atlas exited; CPU time 51798.637428
06:57:39 (30246): called boinc_finish(0)

</stderr_txt>
]]>

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