Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:54 (1355559): wrapper (7.7.26015): starting
23:37:54 (1355559): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 23:37:54] Arguments: --nthreads 4
[2025-06-04 23:37:54] Threads: 4
[2025-06-04 23:37:54] Checking for CVMFS
[2025-06-04 23:37:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:37:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:37:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:37:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:37:54] 2.12.7.0 2709 3050 59180 146795 0 56 4554791 6144001 911 130560 0 3791448 99.994 756178 11604 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-06-04 23:37:54] CVMFS is ok
[2025-06-04 23:37:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:37:54] Checking for apptainer binary...
[2025-06-04 23:37:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:37:54] Running /usr/bin/apptainer --version
[2025-06-04 23:37:54] apptainer version 1.4.0
[2025-06-04 23:37:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:37:54] TS-P310
[2025-06-04 23:37:54] apptainer works
[2025-06-04 23:37:54] Set ATHENA_PROC_NUMBER=4
[2025-06-04 23:37:54] Set ATHENA_CORE_NUMBER=4
[2025-06-04 23:37:54] Starting ATLAS job with PandaID=6677635210
[2025-06-04 23:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:39:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:39:20] 2025-06-04 23:39:05,359 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:39:20] 2025-06-04 23:39:05,360 | INFO     | executing command: lscpu
[2025-06-05 01:39:20] 2025-06-04 23:39:05,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:39:20] 2025-06-04 23:39:07,516 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:39:20] 2025-06-04 23:39:07,516 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6677635210/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,517 | INFO     | extracted standard info from prmon json
[2025-06-05 01:39:20] 2025-06-04 23:39:07,517 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:39:20] 2025-06-04 23:39:07,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:39:20] 2025-06-04 23:39:07,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:39:20] 2025-06-04 23:39:07,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:39:20] 2025-06-04 23:39:07,519 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:39:20] 2025-06-04 23:39:07,519 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | sum of deviations: -11249223683.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | mean x: 1749076700.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | mean y: 2413062.1848739497
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | -- intersect: 37659157263.15107
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | intersect: 37659157263.15107
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | chi2: 1.3610562048971688
[2025-06-05 01:39:20] 2025-06-04 23:39:07,520 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | sum of deviations: -10521432377.999996
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | mean x: 1749076547.5
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | mean y: 2414821.1052631577
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | -- intersect: 40063630654.23621
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | intersect: 40063630654.23621
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | chi2: 1.3566257056076236
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | current chi2=1.3566257056076236 (change=0.3255192014557498 %)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | right removable region: 113
[2025-06-05 01:39:20] 2025-06-04 23:39:07,521 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | sum of deviations: -22709621710.5
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | mean x: 1749076852.5
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | mean y: 2439925.201754386
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | -- intersect: 86471200336.56175
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | intersect: 86471200336.56175
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | chi2: 0.19157354870448548
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | current chi2=0.19157354870448548 (change=85.92464087704892 %)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,522 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | sum of deviations: -18486991169.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | mean x: 1749077005.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | mean y: 2428771.146788991
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | -- intersect: 80531706033.82625
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | intersect: 80531706033.82625
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | chi2: 0.18581455933089064
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | current chi2=0.18581455933089064 (change=3.0061505946619245 %)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | left removable region: 20
[2025-06-05 01:39:20] 2025-06-04 23:39:07,523 | INFO     | sum of square deviations: 249388862.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | sum of deviations: -8759838388.000002
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | mean x: 1749077127.0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | mean y: 2402498.709677419
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | -- intersect: 61439119591.020546
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | intersect: 61439119591.020546
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | chi2: 0.13851460797380757
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | -- intersect: 61439119591.020546
[2025-06-05 01:39:20] 2025-06-04 23:39:07,524 | INFO     | current memory leak: -35.13 B/s (using 93 data points, chi2=0.14)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | ..............................
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . Timing measurements:
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . get job = 0 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . initial setup = 1 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . payload setup = 3 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . stage-in = 0 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . payload execution = 7243 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . stage-out = 0 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | . log creation = 0 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,525 | INFO     | ..............................
[2025-06-05 01:39:20] 2025-06-04 23:39:07,655 | INFO     | 
[2025-06-05 01:39:20] 2025-06-04 23:39:07,655 | INFO     | job summary report
[2025-06-05 01:39:20] 2025-06-04 23:39:07,655 | INFO     | --------------------------------------------------
[2025-06-05 01:39:20] 2025-06-04 23:39:07,655 | INFO     | PanDA job id: 6677635210
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | task id: 45006595
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | errors: (none)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | pilot state: finished 
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | transexitcode: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | exeerrorcode: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | exeerrordiag: 
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | exitcode: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | exitmsg: OK
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | cpuconsumptiontime: 27893 s
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | nevents: 400
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | neventsw: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | pid: 1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | pgrp: 1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | corecount: 4
[2025-06-05 01:39:20] 2025-06-04 23:39:07,656 | INFO     | event service: False
[2025-06-05 01:39:20] 2025-06-04 23:39:07,657 | INFO     | sizes: {0: 2397341, 2: 2397547, 11: 2397575, 7250: 2424832, 7251: 2433831, 7254: 2433945}
[2025-06-05 01:39:20] 2025-06-04 23:39:07,657 | INFO     | --------------------------------------------------
[2025-06-05 01:39:20] 2025-06-04 23:39:07,657 | INFO     | 
[2025-06-05 01:39:20] 2025-06-04 23:39:07,657 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:39:20] 2025-06-04 23:39:07,670 | INFO     | job 6677635210 has completed (purged errors)
[2025-06-05 01:39:20] 2025-06-04 23:39:07,670 | INFO     | overall cleanup function is called
[2025-06-05 01:39:20] 2025-06-04 23:39:07,945 | WARNING  | process 1365636 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 01:39:20] 2025-06-04 23:39:07,992 | INFO     | using path: /var/lib/boinc2/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:39:20] 2025-06-04 23:39:08,052 | INFO     | number of running child processes to parent process 1365636: 1
[2025-06-05 01:39:20] 2025-06-04 23:39:08,053 | INFO     | maximum number of monitored processes: 6
[2025-06-05 01:39:20] 2025-06-04 23:39:08,053 | INFO     | aborting job monitoring since job object (job id=6677635210) has expired
[2025-06-05 01:39:20] 2025-06-04 23:39:08,676 | INFO     | --- collectZombieJob: --- 10, [1365636]
[2025-06-05 01:39:20] 2025-06-04 23:39:08,676 | INFO     | zombie collector waiting for pid 1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:08,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:39:20] 2025-06-04 23:39:08,676 | INFO     | collected zombie processes
[2025-06-05 01:39:20] 2025-06-04 23:39:08,676 | INFO     | will attempt to kill all subprocesses of pid=1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:08,737 | INFO     | process IDs to be killed: [1365636] (in reverse order)
[2025-06-05 01:39:20] 2025-06-04 23:39:08,763 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:39:20] 2025-06-04 23:39:08,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:39:20] 2025-06-04 23:39:08,766 | INFO     | did not find any defunct processes belonging to 1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:08,767 | INFO     | did not find any defunct processes belonging to 1365636
[2025-06-05 01:39:20] 2025-06-04 23:39:08,767 | INFO     | ready for new job
[2025-06-05 01:39:20] 2025-06-04 23:39:08,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:39:20] 2025-06-04 23:39:08,769 | INFO     | **************************************
[2025-06-05 01:39:20] 2025-06-04 23:39:08,769 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:39:20] 2025-06-04 23:39:08,769 | INFO     | **************************************
[2025-06-05 01:39:20] 2025-06-04 23:39:08,769 | INFO     | 
[2025-06-05 01:39:20] 2025-06-04 23:39:08,769 | INFO     | architecture information:
[2025-06-05 01:39:20] 2025-06-04 23:39:08,770 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:39:20] 2025-06-04 23:39:08,778 | INFO     | cat /etc/os-release:
[2025-06-05 01:39:20] NAME="CentOS Linux"
[2025-06-05 01:39:20] VERSION="7 (Core)"
[2025-06-05 01:39:20] ID="centos"
[2025-06-05 01:39:20] ID_LIKE="rhel fedora"
[2025-06-05 01:39:20] VERSION_ID="7"
[2025-06-05 01:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:39:20] ANSI_COLOR="0;31"
[2025-06-05 01:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:39:20] HOME_URL="https://www.centos.org/"
[2025-06-05 01:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:39:20] 
[2025-06-05 01:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:39:20] 
[2025-06-05 01:39:20] 2025-06-04 23:39:08,778 | INFO     | **************************************
[2025-06-05 01:39:20] 2025-06-04 23:39:09,281 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 01:39:20] 2025-06-04 23:39:09,289 | INFO     | sufficient remaining disk space (90247790592 B)
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | INFO     | update_server=False
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:39:20] 2025-06-04 23:39:09,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:39:20] 2025-06-04 23:39:09,291 | INFO     | aborting loop
[2025-06-05 01:39:20] 2025-06-04 23:39:09,299 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:39:20] 2025-06-04 23:39:09,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:39:20] 2025-06-04 23:39:09,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:39:20] 2025-06-04 23:39:10,104 | INFO     | all payload control threads have been joined
[2025-06-05 01:39:20] 2025-06-04 23:39:10,112 | INFO     | all job control threads have been joined
[2025-06-05 01:39:20] 2025-06-04 23:39:10,146 | INFO     | all data control threads have been joined
[2025-06-05 01:39:20] 2025-06-04 23:39:10,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:39:20] 2025-06-04 23:39:10,293 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:10,295 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:10,296 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:10,427 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:10,516 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:10,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:39:20] 2025-06-04 23:39:10,918 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,003 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,109 | INFO     | [payload] control thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,116 | INFO     | [job] control thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,149 | INFO     | [data] control thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,467 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,518 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,653 | INFO     | [job] validate thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:11,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:12,288 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:14,844 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:39:20] 2025-06-04 23:39:15,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129786844329792)>', '<ExcThread(monitor, started 129786059945728)>']
[2025-06-05 01:39:20] 2025-06-04 23:39:16,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:39:20] 2025-06-04 23:39:16,326 | INFO     | [monitor] control thread has ended
[2025-06-05 01:39:20] 2025-06-04 23:39:20,550 | INFO     | all workflow threads have been joined
[2025-06-05 01:39:20] 2025-06-04 23:39:20,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:39:20] 2025-06-04 23:39:20,550 | INFO     | traces error code: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:20,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:39:20] 2025-06-04 23:39:20,627 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:39:20] 2025-06-04 23:39:20,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:39:20] 2025-06-04 23:39:20,631 [wrapper] pilotpid: 1359175
[2025-06-05 01:39:20] 2025-06-04 23:39:20,633 [wrapper] Pilot exit status: 0
[2025-06-05 01:39:20] 2025-06-04 23:39:20,638 [wrapper] pandaids: 6677635210
[2025-06-05 01:39:20] 2025-06-04 23:39:20,656 [wrapper] cleanup supervisor_pilot 1405380 1359176
[2025-06-05 01:39:20] 2025-06-04 23:39:20,658 [wrapper] Test setup, not cleaning
[2025-06-05 01:39:20] 2025-06-04 23:39:20,660 [wrapper] apfmon messages muted
[2025-06-05 01:39:20] 2025-06-04 23:39:20,662 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:39:20] 2025-06-04 23:39:20,663 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:39:20]  *** Error codes and diagnostics ***
[2025-06-05 01:39:20]     "exeErrorCode": 0,
[2025-06-05 01:39:20]     "exeErrorDiag": "",
[2025-06-05 01:39:20]     "pilotErrorCode": 0,
[2025-06-05 01:39:20]     "pilotErrorDiag": "",
[2025-06-05 01:39:20]  *** Listing of results directory ***
[2025-06-05 01:39:20] insgesamt 398336
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc    495897  3. Jun 14:59 pilot3.tar.gz
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc      5111  3. Jun 15:28 queuedata.json
[2025-06-05 01:39:20] -rwx------ 1 boinc boinc     37140  3. Jun 15:29 runpilot2-wrapper.sh
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc       100  4. Jun 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:39:20] -rwxr-xr-x 1 boinc boinc      7986  4. Jun 23:37 run_atlas
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc       105  4. Jun 23:37 job.xml
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc      6726  4. Jun 23:37 init_data.xml
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc 218592313  4. Jun 23:37 EVNT.45006593._001362.pool.root.1
[2025-06-05 01:39:20] drwxrwx--x 2 boinc boinc      4096  4. Jun 23:37 shared
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc    508884  4. Jun 23:37 input.tar.gz
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc     15093  4. Jun 23:37 start_atlas.sh
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc         0  4. Jun 23:37 boinc_lockfile
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc      2524  4. Jun 23:37 pandaJob.out
[2025-06-05 01:39:20] -rw------- 1 boinc boinc    987032  4. Jun 23:37 agis_schedconf.cvmfs.json
[2025-06-05 01:39:20] -rw------- 1 boinc boinc   1598969  4. Jun 23:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:39:20] drwx------ 4 boinc boinc      4096  4. Jun 23:38 pilot3
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc       529  5. Jun 01:38 boinc_task_state.xml
[2025-06-05 01:39:20] -rw------- 1 boinc boinc 183547958  5. Jun 01:38 HITS.45006595._033856.pool.root.1
[2025-06-05 01:39:20] -rw------- 1 boinc boinc        95  5. Jun 01:38 pilot_heartbeat.json
[2025-06-05 01:39:20] -rw------- 1 boinc boinc      1018  5. Jun 01:39 memory_monitor_summary.json
[2025-06-05 01:39:20] -rw------- 1 boinc boinc    254900  5. Jun 01:39 log.45006595._033856.job.log.tgz.1
[2025-06-05 01:39:20] -rw------- 1 boinc boinc      7652  5. Jun 01:39 heartbeat.json
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc        27  5. Jun 01:39 wrapper_checkpoint.txt
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc      8192  5. Jun 01:39 boinc_mmap_file
[2025-06-05 01:39:20] -rw------- 1 boinc boinc      4354  5. Jun 01:39 pilotlog.txt
[2025-06-05 01:39:20] -rw------- 1 boinc boinc    708437  5. Jun 01:39 log.45006595._033856.job.log.1
[2025-06-05 01:39:20] -rw------- 1 boinc boinc       357  5. Jun 01:39 output.list
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc       620  5. Jun 01:39 runtime_log
[2025-06-05 01:39:20] -rw------- 1 boinc boinc    983040  5. Jun 01:39 result.tar.gz
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc      8641  5. Jun 01:39 runtime_log.err
[2025-06-05 01:39:20] -rw------- 1 boinc boinc       644  5. Jun 01:39 0XFMDmFtgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4LkKDmaMjBdn.diag
[2025-06-05 01:39:20] -rw-r--r-- 1 boinc boinc     20752  5. Jun 01:39 stderr.txt
[2025-06-05 01:39:20] HITS file was successfully produced:
[2025-06-05 01:39:20] -rw------- 1 boinc boinc 183547958  5. Jun 01:38 shared/HITS.pool.root.1
[2025-06-05 01:39:20]  *** Contents of shared directory: ***
[2025-06-05 01:39:20] insgesamt 394200
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc 218592313  4. Jun 23:37 ATLAS.root_0
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc    508884  4. Jun 23:37 input.tar.gz
[2025-06-05 01:39:20] -rw-r--r-- 2 boinc boinc     15093  4. Jun 23:37 start_atlas.sh
[2025-06-05 01:39:20] -rw------- 1 boinc boinc 183547958  5. Jun 01:38 HITS.pool.root.1
[2025-06-05 01:39:20] -rw------- 1 boinc boinc    983040  5. Jun 01:39 result.tar.gz
01:39:22 (1355559): run_atlas exited; CPU time 27961.098682
01:39:22 (1355559): called boinc_finish(0)

</stderr_txt>
]]>

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