Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:05:50 (1877703): wrapper (7.7.26015): starting
12:05:50 (1877703): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:05:50] Arguments: --nthreads 8
[2025-06-03 12:05:50] Threads: 8
[2025-06-03 12:05:50] Checking for CVMFS
[2025-06-03 12:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:05:50] 2.12.6.0 956287 147059 217108 146748 3 234 18723892 32935936 3728 130560 0 382591203 99.655 358400563 26172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 12:05:50] CVMFS is ok
[2025-06-03 12:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:05:50] Further information can be found at the LHC@home message board.
[2025-06-03 12:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:05:50] Checking for apptainer binary...
[2025-06-03 12:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:05:50] Running /usr/bin/apptainer --version
[2025-06-03 12:05:50] apptainer version 1.4.1-1.el9
[2025-06-03 12:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:05:51] c-6-4.aglt2.org
[2025-06-03 12:05:51] apptainer works
[2025-06-03 12:05:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:05:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:05:51] Starting ATLAS job with PandaID=6677676133
[2025-06-03 12:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:46:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:46:27]  is_altstaged=None
[2025-06-03 13:46:27]  is_tar=False
[2025-06-03 13:46:27]  lfn=log.45006595._036400.job.log.tgz.1
[2025-06-03 13:46:27]  mtime=0
[2025-06-03 13:46:27]  protocol_id=None
[2025-06-03 13:46:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:46:27]  replicas=None
[2025-06-03 13:46:27]  scope=mc23_13p6TeV
[2025-06-03 13:46:27]  status=None
[2025-06-03 13:46:27]  status_code=0
[2025-06-03 13:46:27]  storage_token=
[2025-06-03 13:46:27]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677676133/log.45006595._036400.job.log.tgz.1
[2025-06-03 13:46:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/ab/log.45006595._036400.job.log.tgz.1
[2025-06-03 13:46:27]  workdir=None
[2025-06-03 13:46:27] ]
[2025-06-03 13:46:27] 2025-06-03 17:46:03,848 | INFO     | transferring file log.45006595._036400.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677676133/log.45006595._036400.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:46:27] 2025-06-03 17:46:03,848 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677676133/log.45006595._036400.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._036400.job
[2025-06-03 13:46:27] 2025-06-03 17:46:03,867 | INFO     | adding to output.list: log.45006595._036400.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/ab/log.45006595._036400.job.log.tg
[2025-06-03 13:46:27] 2025-06-03 17:46:03,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:46:27] 2025-06-03 17:46:03,868 | INFO     | summary of transferred files:
[2025-06-03 13:46:27] 2025-06-03 17:46:03,868 | INFO     |  -- lfn=log.45006595._036400.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:46:27] 2025-06-03 17:46:03,868 | INFO     | stage-out finished correctly
[2025-06-03 13:46:27] 2025-06-03 17:46:04,100 | INFO     | monitor loop #446: job 0:6677676133 is in state 'finished'
[2025-06-03 13:46:27] 2025-06-03 17:46:04,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:46:27] 2025-06-03 17:46:05,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:46:27] 2025-06-03 17:46:06,603 | INFO     | monitor loop #447: job 0:6677676133 is in state 'finished'
[2025-06-03 13:46:27] 2025-06-03 17:46:06,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:46:27] 2025-06-03 17:46:07,732 | INFO     | job 6677676133 has state=finished
[2025-06-03 13:46:27] 2025-06-03 17:46:07,732 | INFO     | preparing for final server update for job 6677676133 in state='finished'
[2025-06-03 13:46:27] 2025-06-03 17:46:07,733 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:46:27] 2025-06-03 17:46:07,733 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:46:27] 2025-06-03 17:46:07,733 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:46:27] 2025-06-03 17:46:07,733 | INFO     | job 6677676133 has finished - writing final server update
[2025-06-03 13:46:27] 2025-06-03 17:46:07,733 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:46:27] 2025-06-03 17:46:07,748 | INFO     | executing command: lscpu
[2025-06-03 13:46:27] 2025-06-03 17:46:07,803 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:46:27] 2025-06-03 17:46:09,106 | INFO     | monitor loop #448: job 0:6677676133 is in state 'finished'
[2025-06-03 13:46:27] 2025-06-03 17:46:09,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,058 | INFO     | PID=1881826 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 13:46:27] 2025-06-03 17:46:11,058 | INFO     | .. there are 5 such processes running
[2025-06-03 13:46:27] 2025-06-03 17:46:11,234 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:46:27] 2025-06-03 17:46:11,234 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677676133/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,235 | INFO     | extracted standard info from prmon json
[2025-06-03 13:46:27] 2025-06-03 17:46:11,236 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:46:27] 2025-06-03 17:46:11,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:46:27] 2025-06-03 17:46:11,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:46:27] 2025-06-03 17:46:11,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:46:27] 2025-06-03 17:46:11,239 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:46:27] 2025-06-03 17:46:11,239 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,239 | INFO     | sum of deviations: 12064330082.999998
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | mean x: 1748969837.0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | mean y: 2132719.4395604394
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | -- intersect: -90307770661.96913
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | intersect: -90307770661.96913
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | chi2: 1.325101291487458
[2025-06-03 13:46:27] 2025-06-03 17:46:11,240 | INFO     | -- intersect: -90307770661.96913
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | current memory leak: 51.64 B/s (using 91 data points, chi2=1.33)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | ..............................
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | . Timing measurements:
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | . get job = 0 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | . initial setup = 3 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,241 | INFO     | . payload setup = 6 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,242 | INFO     | . stage-in = 0 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,242 | INFO     | . payload execution = 5976 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,242 | INFO     | . stage-out = 0 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,242 | INFO     | . log creation = 0 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,242 | INFO     | ..............................
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | 
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | job summary report
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | --------------------------------------------------
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | PanDA job id: 6677676133
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | task id: 45006595
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | errors: (none)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | pilot state: finished 
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | transexitcode: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | exeerrorcode: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | exeerrordiag: 
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | exitcode: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | exitmsg: OK
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | cpuconsumptiontime: 38257 s
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | nevents: 400
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | neventsw: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:11,352 | INFO     | pid: 1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | pgrp: 1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | corecount: 8
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | event service: False
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 12: 2405474, 5987: 2432130, 5988: 2441071, 5990: 2441255, 5995: 2441425}
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | --------------------------------------------------
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | 
[2025-06-03 13:46:27] 2025-06-03 17:46:11,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 13:46:27] 2025-06-03 17:46:11,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | job 6677676133 has completed (purged errors)
[2025-06-03 13:46:27] 2025-06-03 17:46:11,374 | INFO     | overall cleanup function is called
[2025-06-03 13:46:27] 2025-06-03 17:46:12,383 | INFO     | --- collectZombieJob: --- 10, [1889879]
[2025-06-03 13:46:27] 2025-06-03 17:46:12,384 | INFO     | zombie collector waiting for pid 1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:12,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:46:27] 2025-06-03 17:46:12,384 | INFO     | collected zombie processes
[2025-06-03 13:46:27] 2025-06-03 17:46:12,384 | INFO     | will attempt to kill all subprocesses of pid=1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:12,649 | INFO     | process IDs to be killed: [1889879] (in reverse order)
[2025-06-03 13:46:27] 2025-06-03 17:46:12,720 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:46:27] 2025-06-03 17:46:12,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:46:27] 2025-06-03 17:46:12,729 | INFO     | did not find any defunct processes belonging to 1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:12,739 | INFO     | did not find any defunct processes belonging to 1889879
[2025-06-03 13:46:27] 2025-06-03 17:46:12,739 | INFO     | ready for new job
[2025-06-03 13:46:27] 2025-06-03 17:46:12,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:46:27] 2025-06-03 17:46:12,742 | INFO     | **************************************
[2025-06-03 13:46:27] 2025-06-03 17:46:12,742 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:46:27] 2025-06-03 17:46:12,742 | INFO     | **************************************
[2025-06-03 13:46:27] 2025-06-03 17:46:12,742 | INFO     | 
[2025-06-03 13:46:27] 2025-06-03 17:46:12,744 | INFO     | architecture information:
[2025-06-03 13:46:27] 2025-06-03 17:46:12,745 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:46:27] 2025-06-03 17:46:12,757 | INFO     | cat /etc/os-release:
[2025-06-03 13:46:27] NAME="CentOS Linux"
[2025-06-03 13:46:27] VERSION="7 (Core)"
[2025-06-03 13:46:27] ID="centos"
[2025-06-03 13:46:27] ID_LIKE="rhel fedora"
[2025-06-03 13:46:27] VERSION_ID="7"
[2025-06-03 13:46:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:46:27] ANSI_COLOR="0;31"
[2025-06-03 13:46:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:46:27] HOME_URL="https://www.centos.org/"
[2025-06-03 13:46:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:46:27] 
[2025-06-03 13:46:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:46:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:46:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:46:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:46:27] 
[2025-06-03 13:46:27] 2025-06-03 17:46:12,758 | INFO     | **************************************
[2025-06-03 13:46:27] 2025-06-03 17:46:13,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 13:46:27] 2025-06-03 17:46:13,275 | INFO     | sufficient remaining disk space (74439458816 B)
[2025-06-03 13:46:27] 2025-06-03 17:46:13,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:46:27] 2025-06-03 17:46:13,276 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:46:27] 2025-06-03 17:46:13,276 | INFO     | update_server=False
[2025-06-03 13:46:27] 2025-06-03 17:46:13,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:46:27] 2025-06-03 17:46:13,276 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:46:27] 2025-06-03 17:46:13,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:46:27] 2025-06-03 17:46:13,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:46:27] 2025-06-03 17:46:13,277 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:46:27] 2025-06-03 17:46:13,278 | INFO     | aborting loop
[2025-06-03 13:46:27] 2025-06-03 17:46:13,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:46:27] 2025-06-03 17:46:13,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:46:27] 2025-06-03 17:46:13,768 | INFO     | all data control threads have been joined
[2025-06-03 13:46:27] 2025-06-03 17:46:14,279 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,280 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,280 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,283 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,431 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,454 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:46:27] 2025-06-03 17:46:14,698 | INFO     | all job control threads have been joined
[2025-06-03 13:46:27] 2025-06-03 17:46:14,717 | INFO     | all payload control threads have been joined
[2025-06-03 13:46:27] 2025-06-03 17:46:14,773 | INFO     | [data] control thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:14,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,069 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,471 | INFO     | [job] validate thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,569 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,700 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,704 | INFO     | [job] control thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:15,723 | INFO     | [payload] control thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:16,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:46:27] 2025-06-03 17:46:16,500 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:20,192 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:46:27] 2025-06-03 17:46:22,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062155151168)>', '<ExcThread(monitor, started 140061433657088)>']
[2025-06-03 13:46:27] 2025-06-03 17:46:22,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:46:27] 2025-06-03 17:46:22,319 | INFO     | [monitor] control thread has ended
[2025-06-03 13:46:27] 2025-06-03 17:46:27,130 | INFO     | all workflow threads have been joined
[2025-06-03 13:46:27] 2025-06-03 17:46:27,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:46:27] 2025-06-03 17:46:27,131 | INFO     | traces error code: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:27,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:46:27] 2025-06-03 17:46:27,254 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:46:27] 2025-06-03 17:46:27,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:46:27] 2025-06-03 17:46:27,258 [wrapper] pilotpid: 1881826
[2025-06-03 13:46:27] 2025-06-03 17:46:27,261 [wrapper] Pilot exit status: 0
[2025-06-03 13:46:27] 2025-06-03 17:46:27,270 [wrapper] pandaids: 6677676133
[2025-06-03 13:46:27] 2025-06-03 17:46:27,319 [wrapper] cleanup supervisor_pilot 2106157 1881827
[2025-06-03 13:46:27] 2025-06-03 17:46:27,322 [wrapper] Test setup, not cleaning
[2025-06-03 13:46:27] 2025-06-03 17:46:27,325 [wrapper] apfmon messages muted
[2025-06-03 13:46:27] 2025-06-03 17:46:27,327 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:46:27] 2025-06-03 17:46:27,330 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:46:27]  *** Error codes and diagnostics ***
[2025-06-03 13:46:27]     "exeErrorCode": 0,
[2025-06-03 13:46:27]     "exeErrorDiag": "",
[2025-06-03 13:46:27]     "pilotErrorCode": 0,
[2025-06-03 13:46:27]     "pilotErrorDiag": "",
[2025-06-03 13:46:27]  *** Listing of results directory ***
[2025-06-03 13:46:27] total 391132
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 13:46:27] -rwx------. 1 boincer umatlas     37140 Jun  3 11:01 runpilot2-wrapper.sh
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:01 queuedata.json
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas       100 Jun  3 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:46:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 12:05 run_atlas
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas       105 Jun  3 12:05 job.xml
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas 216202936 Jun  3 12:05 EVNT.45006593._001462.pool.root.1
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 12:05 input.tar.gz
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:05 start_atlas.sh
[2025-06-03 13:46:27] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 12:05 shared
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas         0 Jun  3 12:05 boinc_lockfile
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 12:05 pandaJob.out
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas    983735 Jun  3 12:05 agis_schedconf.cvmfs.json
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas   1603667 Jun  3 12:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:46:27] drwx------. 4 boincer umatlas      4096 Jun  3 12:06 pilot3
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas 178655848 Jun  3 13:45 HITS.45006595._036400.pool.root.1
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:45 boinc_task_state.xml
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas        95 Jun  3 13:45 pilot_heartbeat.json
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas      1031 Jun  3 13:45 memory_monitor_summary.json
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas    333128 Jun  3 13:46 log.45006595._036400.job.log.tgz.1
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas      7706 Jun  3 13:46 heartbeat.json
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 13:46 init_data.xml
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:46 boinc_mmap_file
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:46 wrapper_checkpoint.txt
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas      4476 Jun  3 13:46 pilotlog.txt
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas    579775 Jun  3 13:46 log.45006595._036400.job.log.1
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas       357 Jun  3 13:46 output.list
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:46 runtime_log
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas    931840 Jun  3 13:46 result.tar.gz
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 13:46 runtime_log.err
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas       649 Jun  3 13:46 R1QKDm5Jig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVikKDmPMgi5n.diag
[2025-06-03 13:46:27] -rw-r--r--. 1 boincer umatlas     21524 Jun  3 13:46 stderr.txt
[2025-06-03 13:46:27] HITS file was successfully produced:
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas 178655848 Jun  3 13:45 shared/HITS.pool.root.1
[2025-06-03 13:46:27]  *** Contents of shared directory: ***
[2025-06-03 13:46:27] total 387040
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas 216202936 Jun  3 12:05 ATLAS.root_0
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 12:05 input.tar.gz
[2025-06-03 13:46:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 12:05 start_atlas.sh
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas 178655848 Jun  3 13:45 HITS.pool.root.1
[2025-06-03 13:46:27] -rw-------. 1 boincer umatlas    931840 Jun  3 13:46 result.tar.gz
13:46:28 (1877703): run_atlas exited; CPU time 38391.607987
13:46:28 (1877703): called boinc_finish(0)

</stderr_txt>
]]>

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