Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:15:59 (903079): wrapper (7.7.26015): starting
02:15:59 (903079): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 02:15:59] Arguments: --nthreads 3
[2025-06-04 02:15:59] Threads: 3
[2025-06-04 02:15:59] Checking for CVMFS
[2025-06-04 02:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:15:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:15:59] 2.9.2.0 360883 1801 69548 146761 0 56 32277419 36864000 0 130560 0 1476638 99.992 444802 56938 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 02:15:59] CVMFS is ok
[2025-06-04 02:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:15:59] Further information can be found at the LHC@home message board.
[2025-06-04 02:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:15:59] Checking for apptainer binary...
[2025-06-04 02:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:15:59] Running /usr/bin/apptainer --version
[2025-06-04 02:15:59] apptainer version 1.3.6-6.1
[2025-06-04 02:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:15:59] thA335
[2025-06-04 02:15:59] apptainer works
[2025-06-04 02:15:59] Set ATHENA_PROC_NUMBER=3
[2025-06-04 02:15:59] Set ATHENA_CORE_NUMBER=3
[2025-06-04 02:15:59] Starting ATLAS job with PandaID=6677621683
[2025-06-04 02:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:34:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean x: 1748996713.5
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean y: 2513953.0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | chi2: 0.013822488618643169
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | current memory leak: -1272.22 B/s (using 8 data points, chi2=0.01)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . Timing measurements:
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . get job = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . initial setup = 1 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload setup = 5 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-in = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload execution = 910 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-out = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . log creation = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677621683/pilotlog.txt
[2025-06-04 02:34:03] 2025-06-04 00:33:50,164 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 02:34:03] - Log from pilotlog.txt -
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | sum of deviations: -198824803.0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean x: 1748996713.5
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean y: 2513953.0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | chi2: 0.013822488618643169
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | current memory leak: -1272.22 B/s (using 8 data points, chi2=0.01)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . Timing measurements:
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . get job = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . initial setup = 1 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload setup = 5 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-in = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload execution = 910 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-out = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . log creation = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677621683/pilotlog.txt
[2025-06-04 02:34:03] 2025-06-04 00:33:50,165 | WARNING  | 
[2025-06-04 02:34:03] [begin log extracts]
[2025-06-04 02:34:03] - Log from pilotlog.txt -
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | sum of deviations: -198824803.0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean x: 1748996713.5
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | mean y: 2513953.0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | chi2: 0.013822488618643169
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | -- intersect: 2225107945220.1
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | current memory leak: -1272.22 B/s (using 8 data points, chi2=0.01)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . Timing measurements:
[2025-06-04 02:34:03] 2025-06-04 00:33:50,155 | INFO     | . get job = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . initial setup = 1 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload setup = 5 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-in = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . payload execution = 910 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . stage-out = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | . log creation = 0 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | ..............................
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:34:03] 2025-06-04 00:33:50,156 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677621683/pilotlog.txt
[2025-06-04 02:34:03] [end log extracts]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,165 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,165 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | 
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | job summary report
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | --------------------------------------------------
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | PanDA job id: 6677621683
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | task id: 45006595
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 00:31:37,835 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:34:03] 2025-06-04 00:33:50,231 | INFO     | pilot state: failed 
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | transexitcode: 65
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | exeerrorcode: 65
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | exitcode: 65
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | cpuconsumptiontime: 2076 s
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | nevents: 0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | neventsw: 0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | pid: 913215
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | pgrp: 913215
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | corecount: 3
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | event service: False
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | sizes: {0: 2405187, 6: 2405393, 11: 2405421, 919: 2432165, 920: 2436462, 1045: 2436576}
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | --------------------------------------------------
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | 
[2025-06-04 02:34:03] 2025-06-04 00:33:50,232 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | job 6677621683 has completed (purged errors)
[2025-06-04 02:34:03] 2025-06-04 00:33:50,248 | INFO     | overall cleanup function is called
[2025-06-04 02:34:03] 2025-06-04 00:33:51,255 | INFO     | --- collectZombieJob: --- 10, [913215]
[2025-06-04 02:34:03] 2025-06-04 00:33:51,255 | INFO     | zombie collector waiting for pid 913215
[2025-06-04 02:34:03] 2025-06-04 00:33:51,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:34:03] 2025-06-04 00:33:51,256 | INFO     | collected zombie processes
[2025-06-04 02:34:03] 2025-06-04 00:33:51,256 | INFO     | will attempt to kill all subprocesses of pid=913215
[2025-06-04 02:34:03] 2025-06-04 00:33:51,296 | INFO     | process IDs to be killed: [913215] (in reverse order)
[2025-06-04 02:34:03] 2025-06-04 00:33:51,322 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:34:03] 2025-06-04 00:33:51,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:34:03] 2025-06-04 00:33:51,323 | INFO     | did not find any defunct processes belonging to 913215
[2025-06-04 02:34:03] 2025-06-04 00:33:51,324 | INFO     | did not find any defunct processes belonging to 913215
[2025-06-04 02:34:03] 2025-06-04 00:33:51,324 | INFO     | ready for new job
[2025-06-04 02:34:03] 2025-06-04 00:33:51,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:34:03] 2025-06-04 00:33:51,325 | INFO     | **************************************
[2025-06-04 02:34:03] 2025-06-04 00:33:51,325 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:34:03] 2025-06-04 00:33:51,325 | INFO     | **************************************
[2025-06-04 02:34:03] 2025-06-04 00:33:51,325 | INFO     | 
[2025-06-04 02:34:03] 2025-06-04 00:33:51,326 | INFO     | architecture information:
[2025-06-04 02:34:03] 2025-06-04 00:33:51,326 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:34:03] 2025-06-04 00:33:51,336 | INFO     | cat /etc/os-release:
[2025-06-04 02:34:03] NAME="CentOS Linux"
[2025-06-04 02:34:03] VERSION="7 (Core)"
[2025-06-04 02:34:03] ID="centos"
[2025-06-04 02:34:03] ID_LIKE="rhel fedora"
[2025-06-04 02:34:03] VERSION_ID="7"
[2025-06-04 02:34:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:34:03] ANSI_COLOR="0;31"
[2025-06-04 02:34:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:34:03] HOME_URL="https://www.centos.org/"
[2025-06-04 02:34:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:34:03] 
[2025-06-04 02:34:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:34:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:34:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:34:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:34:03] 
[2025-06-04 02:34:03] 2025-06-04 00:33:51,336 | INFO     | **************************************
[2025-06-04 02:34:03] 2025-06-04 00:33:51,840 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 02:34:03] 2025-06-04 00:33:51,855 | INFO     | sufficient remaining disk space (824929419264 B)
[2025-06-04 02:34:03] 2025-06-04 00:33:51,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:34:03] 2025-06-04 00:33:51,855 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:34:03] 2025-06-04 00:33:51,855 | INFO     | update_server=False
[2025-06-04 02:34:03] 2025-06-04 00:33:51,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:34:03] 2025-06-04 00:33:51,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:34:03] 2025-06-04 00:33:51,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:34:03] 2025-06-04 00:33:52,012 | INFO     | all data control threads have been joined
[2025-06-04 02:34:03] 2025-06-04 00:33:52,179 | INFO     | PID=906717 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 02:34:03] 2025-06-04 00:33:52,179 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:34:03] 2025-06-04 00:33:52,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:34:03] 2025-06-04 00:33:52,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:34:03] 2025-06-04 00:33:52,240 | INFO     | all payload control threads have been joined
[2025-06-04 02:34:03] 2025-06-04 00:33:52,315 | INFO     | all job control threads have been joined
[2025-06-04 02:34:03] 2025-06-04 00:33:52,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:34:03] 2025-06-04 00:33:52,660 | INFO     | aborting loop
[2025-06-04 02:34:03] 2025-06-04 00:33:52,860 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:52,861 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:52,873 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:52,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,018 | INFO     | [data] control thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:34:03] 2025-06-04 00:33:53,245 | INFO     | [payload] control thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,321 | INFO     | [job] control thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,485 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,666 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,765 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:53,862 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:54,063 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:54,250 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:54,251 | INFO     | [job] validate thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:54,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:57,144 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:34:03] 2025-06-04 00:33:58,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325686445888)>', '<ExcThread(monitor, started 140324970166016)>']
[2025-06-04 02:34:03] 2025-06-04 00:33:59,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:34:03] 2025-06-04 00:33:59,217 | INFO     | [monitor] control thread has ended
[2025-06-04 02:34:03] 2025-06-04 00:34:03,708 | INFO     | all workflow threads have been joined
[2025-06-04 02:34:03] 2025-06-04 00:34:03,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:34:03] 2025-06-04 00:34:03,709 | INFO     | traces error code: 0
[2025-06-04 02:34:03] 2025-06-04 00:34:03,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:34:03] 2025-06-04 00:34:03,760 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:34:03] 2025-06-04 00:34:03,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:34:03] 2025-06-04 00:34:03,766 [wrapper] pilotpid: 906717
[2025-06-04 02:34:03] 2025-06-04 00:34:03,769 [wrapper] Pilot exit status: 0
[2025-06-04 02:34:03] 2025-06-04 00:34:03,777 [wrapper] pandaids: 6677621683
[2025-06-04 02:34:03] 2025-06-04 00:34:03,795 [wrapper] cleanup supervisor_pilot  920041 906718
[2025-06-04 02:34:03] 2025-06-04 00:34:03,797 [wrapper] Test setup, not cleaning
[2025-06-04 02:34:03] 2025-06-04 00:34:03,800 [wrapper] apfmon messages muted
[2025-06-04 02:34:03] 2025-06-04 00:34:03,803 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:34:03] 2025-06-04 00:34:03,805 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:34:03]  *** Error codes and diagnostics ***
[2025-06-04 02:34:03]     "exeErrorCode": 65,
[2025-06-04 02:34:03]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-06-04 02:34:03]     "pilotErrorCode": 1305,
[2025-06-04 02:34:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-06-04 02:34:03]  *** Listing of results directory ***
[2025-06-04 02:34:03] total 215852
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:25 queuedata.json
[2025-06-04 02:34:03] -rwx------ 1 boinc boinc     37140 Jun  3 15:26 runpilot2-wrapper.sh
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:34:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:15 run_atlas
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:15 job.xml
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc 216536882 Jun  4 02:15 EVNT.45006593._001359.pool.root.1
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc      6678 Jun  4 02:15 init_data.xml
[2025-06-04 02:34:03] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:15 shared
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc    508887 Jun  4 02:15 input.tar.gz
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:15 start_atlas.sh
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:15 boinc_lockfile
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc      2525 Jun  4 02:15 pandaJob.out
[2025-06-04 02:34:03] -rw------- 1 boinc boinc    986077 Jun  4 02:16 agis_schedconf.cvmfs.json
[2025-06-04 02:34:03] -rw------- 1 boinc boinc   1603667 Jun  4 02:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:34:03] drwx------ 4 boinc boinc      4096 Jun  4 02:16 pilot3
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc       527 Jun  4 02:31 boinc_task_state.xml
[2025-06-04 02:34:03] -rw------- 1 boinc boinc      1010 Jun  4 02:31 memory_monitor_summary.json
[2025-06-04 02:34:03] -rw------- 1 boinc boinc    183537 Jun  4 02:31 log.45006595._033789.job.log.tgz.1
[2025-06-04 02:34:03] -rw------- 1 boinc boinc        95 Jun  4 02:33 pilot_heartbeat.json
[2025-06-04 02:34:03] -rw------- 1 boinc boinc      9778 Jun  4 02:33 heartbeat.json
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc        26 Jun  4 02:33 wrapper_checkpoint.txt
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc      8192 Jun  4 02:33 boinc_mmap_file
[2025-06-04 02:34:03] -rw------- 1 boinc boinc      4675 Jun  4 02:34 pilotlog.txt
[2025-06-04 02:34:03] -rw------- 1 boinc boinc    147658 Jun  4 02:34 log.45006595._033789.job.log.1
[2025-06-04 02:34:03] -rw------- 1 boinc boinc       188 Jun  4 02:34 output.list
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc       620 Jun  4 02:34 runtime_log
[2025-06-04 02:34:03] -rw------- 1 boinc boinc    348160 Jun  4 02:34 result.tar.gz
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc      8581 Jun  4 02:34 runtime_log.err
[2025-06-04 02:34:03] -rw------- 1 boinc boinc       654 Jun  4 02:34 LvhNDmcpgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyLkKDmVibImm.diag
[2025-06-04 02:34:03] -rw-r--r-- 1 boinc boinc     21633 Jun  4 02:34 stderr.txt
[2025-06-04 02:34:03] No HITS result produced
[2025-06-04 02:34:03]  *** Contents of shared directory: ***
[2025-06-04 02:34:03] total 212324
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc 216536882 Jun  4 02:15 ATLAS.root_0
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc    508887 Jun  4 02:15 input.tar.gz
[2025-06-04 02:34:03] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:15 start_atlas.sh
[2025-06-04 02:34:03] -rw------- 1 boinc boinc    348160 Jun  4 02:34 result.tar.gz
02:34:05 (903079): run_atlas exited; CPU time 2077.809665
02:34:05 (903079): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN