Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:09:28 (16567): wrapper (7.7.26015): starting
04:09:28 (16567): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:09:28] Arguments: --nthreads 8
[2025-06-04 04:09:28] Threads: 8
[2025-06-04 04:09:28] Checking for CVMFS
[2025-06-04 04:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:09:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:09:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:09:29] 2.11.2.0 19945 32770 96864 146763 2 221 17497669 25165824 4120 130560 0 17079330 99.746 20301988 2156 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 04:09:29] CVMFS is ok
[2025-06-04 04:09:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:09:29] Checking for apptainer binary...
[2025-06-04 04:09:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:09:29] Running /usr/bin/apptainer --version
[2025-06-04 04:09:29] apptainer version 1.3.2-1.el7
[2025-06-04 04:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:09:30] cg-vwn324.simple-grid.lan
[2025-06-04 04:09:30] apptainer works
[2025-06-04 04:09:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:09:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:09:30] Starting ATLAS job with PandaID=6677621641
[2025-06-04 04:09:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:15:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:15:58] 2025-06-04 05:55:48,923 | INFO     | monitor loop #949: job 0:6677621641 is in state 'finished'
[2025-06-04 09:15:58] 2025-06-04 05:55:48,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:15:58] 2025-06-04 05:55:50,963 | INFO     | PID=20237 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:15:58] 2025-06-04 05:55:50,963 | INFO     | .. there are 9 such processes running
[2025-06-04 09:15:58] 2025-06-04 05:55:51,428 | INFO     | monitor loop #950: job 0:6677621641 is in state 'finished'
[2025-06-04 09:15:58] 2025-06-04 05:55:51,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,585 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:15:58] 2025-06-04 05:55:52,586 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677621641/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,587 | INFO     | extracted standard info from prmon json
[2025-06-04 09:15:58] 2025-06-04 05:55:52,587 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:15:58] 2025-06-04 05:55:52,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:15:58] 2025-06-04 05:55:52,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:15:58] 2025-06-04 05:55:52,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:15:58] 2025-06-04 05:55:52,593 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:15:58] 2025-06-04 05:55:52,594 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,596 | INFO     | sum of deviations: -10974696934.500004
[2025-06-04 09:15:58] 2025-06-04 05:55:52,596 | INFO     | mean x: 1749009722.5
[2025-06-04 09:15:58] 2025-06-04 05:55:52,596 | INFO     | mean y: 2505396.5318181817
[2025-06-04 09:15:58] 2025-06-04 05:55:52,596 | INFO     | -- intersect: 5816133765.24871
[2025-06-04 09:15:58] 2025-06-04 05:55:52,596 | INFO     | intersect: 5816133765.24871
[2025-06-04 09:15:58] 2025-06-04 05:55:52,597 | INFO     | chi2: 1.7270923771970663
[2025-06-04 09:15:58] 2025-06-04 05:55:52,597 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,599 | INFO     | sum of deviations: -10766877834.000008
[2025-06-04 09:15:58] 2025-06-04 05:55:52,599 | INFO     | mean x: 1749009570.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,599 | INFO     | mean y: 2505543.28372093
[2025-06-04 09:15:58] 2025-06-04 05:55:52,599 | INFO     | -- intersect: 6113298407.080195
[2025-06-04 09:15:58] 2025-06-04 05:55:52,599 | INFO     | intersect: 6113298407.080195
[2025-06-04 09:15:58] 2025-06-04 05:55:52,600 | INFO     | chi2: 1.7257872916394772
[2025-06-04 09:15:58] 2025-06-04 05:55:52,600 | INFO     | current chi2=1.7257872916394772 (change=0.07556547494623161 %)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,600 | INFO     | right removable region: 214
[2025-06-04 09:15:58] 2025-06-04 05:55:52,600 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,602 | INFO     | sum of deviations: -45718988514.99999
[2025-06-04 09:15:58] 2025-06-04 05:55:52,602 | INFO     | mean x: 1749009875.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,603 | INFO     | mean y: 2529243.8418604652
[2025-06-04 09:15:58] 2025-06-04 05:55:52,603 | INFO     | -- intersect: 25950563742.25608
[2025-06-04 09:15:58] 2025-06-04 05:55:52,603 | INFO     | intersect: 25950563742.25608
[2025-06-04 09:15:58] 2025-06-04 05:55:52,603 | INFO     | chi2: 0.20650587302169646
[2025-06-04 09:15:58] 2025-06-04 05:55:52,603 | INFO     | current chi2=0.20650587302169646 (change=88.04314837189897 %)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,604 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 09:15:58] 2025-06-04 05:55:52,606 | INFO     | sum of deviations: -41903116740.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,607 | INFO     | mean x: 1749010027.5
[2025-06-04 09:15:58] 2025-06-04 05:55:52,607 | INFO     | mean y: 2526444.7714285715
[2025-06-04 09:15:58] 2025-06-04 05:55:52,607 | INFO     | -- intersect: 25524377283.87821
[2025-06-04 09:15:58] 2025-06-04 05:55:52,607 | INFO     | intersect: 25524377283.87821
[2025-06-04 09:15:58] 2025-06-04 05:55:52,607 | INFO     | chi2: 0.19622578617943595
[2025-06-04 09:15:58] 2025-06-04 05:55:52,608 | INFO     | current chi2=0.19622578617943595 (change=4.97810870549935 %)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,608 | INFO     | left removable region: 20
[2025-06-04 09:15:58] 2025-06-04 05:55:52,608 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 09:15:58] 2025-06-04 05:55:52,610 | INFO     | sum of deviations: -27767729480.0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,610 | INFO     | mean x: 1749010149.5
[2025-06-04 09:15:58] 2025-06-04 05:55:52,610 | INFO     | mean y: 2516459.8350515463
[2025-06-04 09:15:58] 2025-06-04 05:55:52,610 | INFO     | -- intersect: 21454162636.637203
[2025-06-04 09:15:58] 2025-06-04 05:55:52,610 | INFO     | intersect: 21454162636.637203
[2025-06-04 09:15:58] 2025-06-04 05:55:52,611 | INFO     | chi2: 0.1679513801981548
[2025-06-04 09:15:58] 2025-06-04 05:55:52,611 | INFO     | -- intersect: 21454162636.637203
[2025-06-04 09:15:58] 2025-06-04 05:55:52,611 | INFO     | current memory leak: -12.27 B/s (using 194 data points, chi2=0.17)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | ..............................
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | . Timing measurements:
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | . get job = 0 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | . initial setup = 2 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | . payload setup = 13 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,612 | INFO     | . stage-in = 0 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,613 | INFO     | . payload execution = 13439 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,613 | INFO     | . stage-out = 2 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,613 | INFO     | . log creation = 0 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,613 | INFO     | ..............................
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | 
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | job summary report
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | --------------------------------------------------
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | PanDA job id: 6677621641
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | task id: 45006595
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | errors: (none)
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:15:58] 2025-06-04 05:55:52,837 | INFO     | pilot state: finished 
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | transexitcode: 0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | exeerrorcode: 0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | exeerrordiag: 
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | exitcode: 0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | exitmsg: OK
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | cpuconsumptiontime: 50175 s
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | nevents: 400
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | neventsw: 0
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | pid: 26764
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | pgrp: 26764
[2025-06-04 09:15:58] 2025-06-04 05:55:52,838 | INFO     | corecount: 8
[2025-06-04 09:15:58] 2025-06-04 05:55:52,839 | INFO     | event service: False
[2025-06-04 09:15:58] 2025-06-04 05:55:52,839 | INFO     | sizes: {0: 2405013, 1: 2405212, 10: 2405418, 12: 2405446, 13456: 2435046, 13457: 2435045, 13459: 2444170, 13463: 2444226, 13545: 2444396}
[2025-06-04 09:15:58] 2025-06-04 05:55:52,839 | INFO     | --------------------------------------------------
[2025-06-04 09:15:58] 2025-06-04 05:55:52,839 | INFO     | 
[2025-06-04 09:15:58] 2025-06-04 05:55:52,839 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 09:15:58] 2025-06-04 05:55:53,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:15:58] 2025-06-04 05:55:53,292 | INFO     | job 6677621641 has completed (purged errors)
[2025-06-04 09:15:58] 2025-06-04 05:55:53,292 | INFO     | overall cleanup function is called
[2025-06-04 09:15:58] 2025-06-04 05:55:54,301 | INFO     | --- collectZombieJob: --- 10, [26764]
[2025-06-04 09:15:58] 2025-06-04 05:55:54,301 | INFO     | zombie collector waiting for pid 26764
[2025-06-04 09:15:58] 2025-06-04 05:55:54,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:15:58] 2025-06-04 05:55:54,301 | INFO     | collected zombie processes
[2025-06-04 09:15:58] 2025-06-04 05:55:54,301 | INFO     | will attempt to kill all subprocesses of pid=26764
[2025-06-04 09:15:58] 2025-06-04 05:55:54,459 | INFO     | process IDs to be killed: [26764] (in reverse order)
[2025-06-04 09:15:58] 2025-06-04 05:55:54,668 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:15:58] 2025-06-04 05:55:54,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:15:58] 2025-06-04 05:55:54,673 | INFO     | did not find any defunct processes belonging to 26764
[2025-06-04 09:15:58] 2025-06-04 05:55:54,676 | INFO     | did not find any defunct processes belonging to 26764
[2025-06-04 09:15:58] 2025-06-04 05:55:54,677 | INFO     | ready for new job
[2025-06-04 09:15:58] 2025-06-04 05:55:54,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:15:58] 2025-06-04 05:55:54,679 | INFO     | **************************************
[2025-06-04 09:15:58] 2025-06-04 05:55:54,679 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:15:58] 2025-06-04 05:55:54,679 | INFO     | **************************************
[2025-06-04 09:15:58] 2025-06-04 05:55:54,679 | INFO     | 
[2025-06-04 09:15:58] 2025-06-04 05:55:54,680 | INFO     | pilot is running in a VM
[2025-06-04 09:15:58] 2025-06-04 05:55:54,680 | INFO     | architecture information:
[2025-06-04 09:15:58] 2025-06-04 05:55:54,687 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:15:58] 2025-06-04 05:55:54,976 | INFO     | cat /etc/os-release:
[2025-06-04 09:15:58] NAME="CentOS Linux"
[2025-06-04 09:15:58] VERSION="7 (Core)"
[2025-06-04 09:15:58] ID="centos"
[2025-06-04 09:15:58] ID_LIKE="rhel fedora"
[2025-06-04 09:15:58] VERSION_ID="7"
[2025-06-04 09:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:15:58] ANSI_COLOR="0;31"
[2025-06-04 09:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:15:58] HOME_URL="https://www.centos.org/"
[2025-06-04 09:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:15:58] 
[2025-06-04 09:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:15:58] 
[2025-06-04 09:15:58] 2025-06-04 05:55:54,976 | INFO     | **************************************
[2025-06-04 09:15:58] 2025-06-04 05:55:55,480 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 09:15:58] 2025-06-04 05:55:55,765 | INFO     | sufficient remaining disk space (497134075904 B)
[2025-06-04 09:15:58] 2025-06-04 05:55:55,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:15:58] 2025-06-04 05:55:55,766 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:15:58] 2025-06-04 05:55:55,766 | INFO     | update_server=False
[2025-06-04 09:15:58] 2025-06-04 05:55:55,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:15:58] 2025-06-04 05:55:55,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:15:58] 2025-06-04 05:55:55,767 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:15:58] 2025-06-04 05:55:55,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:15:58] 2025-06-04 05:55:55,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:15:58] 2025-06-04 05:55:55,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:15:58] 2025-06-04 05:55:55,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:15:58] 2025-06-04 05:55:55,771 | INFO     | aborting loop
[2025-06-04 09:15:58] 2025-06-04 05:55:56,041 | INFO     | all job control threads have been joined
[2025-06-04 09:15:58] 2025-06-04 05:55:56,465 | INFO     | all data control threads have been joined
[2025-06-04 09:15:58] 2025-06-04 05:55:56,772 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,777 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,860 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,872 | INFO     | [job] validate thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,900 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,903 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:56,922 | INFO     | all payload control threads have been joined
[2025-06-04 09:15:58] 2025-06-04 05:55:56,980 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,048 | INFO     | [job] control thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,095 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,471 | INFO     | [data] control thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:15:58] 2025-06-04 05:55:57,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:15:58] 2025-06-04 05:55:57,777 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,865 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:57,929 | INFO     | [payload] control thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:55:58,763 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:56:01,704 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:15:58] 2025-06-04 05:56:03,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529101395776)>', '<ExcThread(monitor, started 140528402278144)>']
[2025-06-04 09:15:58] 2025-06-04 05:56:03,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:15:58] 2025-06-04 05:56:03,814 | INFO     | [monitor] control thread has ended
[2025-06-04 09:15:58] 2025-06-04 05:56:08,612 | INFO     | all workflow threads have been joined
[2025-06-04 09:15:58] 2025-06-04 05:56:08,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:15:58] 2025-06-04 05:56:08,612 | INFO     | traces error code: 0
[2025-06-04 09:15:58] 2025-06-04 05:56:08,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:15:58] 2025-06-04 05:56:08,982 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:15:58] 2025-06-04 05:56:09,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:15:58] 2025-06-04 05:56:09,141 [wrapper] pilotpid: 20237
[2025-06-04 09:15:58] 2025-06-04 05:56:09,214 [wrapper] Pilot exit status: 0
[2025-06-04 09:15:58] 2025-06-04 05:56:09,730 [wrapper] pandaids: 6677621641
[2025-06-04 09:15:58] 2025-06-04 05:56:10,537 [wrapper] cleanup supervisor_pilot 18192 20238
[2025-06-04 09:15:58] 2025-06-04 05:56:10,561 [wrapper] Test setup, not cleaning
[2025-06-04 09:15:58] 2025-06-04 05:56:10,662 [wrapper] apfmon messages muted
[2025-06-04 09:15:58] 2025-06-04 05:56:10,692 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:15:58] 2025-06-04 05:56:10,724 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:15:58]  *** Error codes and diagnostics ***
[2025-06-04 09:15:58]     "exeErrorCode": 0,
[2025-06-04 09:15:58]     "exeErrorDiag": "",
[2025-06-04 09:15:58]     "pilotErrorCode": 0,
[2025-06-04 09:15:58]     "pilotErrorDiag": "",
[2025-06-04 09:15:58]  *** Listing of results directory ***
[2025-06-04 09:15:58] total 387844
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:23 queuedata.json
[2025-06-04 09:15:58] -rwx------. 1 boinc boinc     37140 Jun  3 15:24 runpilot2-wrapper.sh
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:15:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:09 run_atlas
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:09 job.xml
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc 214702713 Jun  4 04:09 EVNT.45006593._001358.pool.root.1
[2025-06-04 09:15:58] drwxrwx--x. 2 boinc boinc        68 Jun  4 04:09 shared
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc    508889 Jun  4 04:09 input.tar.gz
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc      6390 Jun  4 04:09 init_data.xml
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:09 start_atlas.sh
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:09 boinc_lockfile
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:09 pandaJob.out
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc    986077 Jun  4 04:09 agis_schedconf.cvmfs.json
[2025-06-04 09:15:58] drwx------. 4 boinc boinc      4096 Jun  4 04:09 pilot3
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc 175518996 Jun  4 07:53 HITS.45006595._033747.pool.root.1
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc       531 Jun  4 07:53 boinc_task_state.xml
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc      1018 Jun  4 07:54 memory_monitor_summary.json
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc   1603667 Jun  4 07:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc    374479 Jun  4 07:54 log.45006595._033747.job.log.tgz.1
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc        95 Jun  4 07:55 pilot_heartbeat.json
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc      7688 Jun  4 07:55 heartbeat.json
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc      4539 Jun  4 07:56 pilotlog.txt
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc   1178420 Jun  4 07:56 log.45006595._033747.job.log.1
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc       357 Jun  4 07:56 output.list
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:56 runtime_log
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc   1576960 Jun  4 07:56 result.tar.gz
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc      8659 Jun  4 07:56 runtime_log.err
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc       656 Jun  4 07:56 6JMMDmCogg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxhYKDmEgrx9m.diag
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc      8192 Jun  4 09:15 boinc_mmap_file
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc        28 Jun  4 09:15 wrapper_checkpoint.txt
[2025-06-04 09:15:58] -rw-r--r--. 1 boinc boinc     20835 Jun  4 09:15 stderr.txt
[2025-06-04 09:15:58] HITS file was successfully produced:
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc 175518996 Jun  4 07:53 shared/HITS.pool.root.1
[2025-06-04 09:15:58]  *** Contents of shared directory: ***
[2025-06-04 09:15:58] total 383136
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc 214702713 Jun  4 04:09 ATLAS.root_0
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc    508889 Jun  4 04:09 input.tar.gz
[2025-06-04 09:15:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:09 start_atlas.sh
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc 175518996 Jun  4 07:53 HITS.pool.root.1
[2025-06-04 09:15:58] -rw-------. 1 boinc boinc   1576960 Jun  4 07:56 result.tar.gz
09:16:00 (16567): run_atlas exited; CPU time 50348.028691
09:16:00 (16567): called boinc_finish(0)

</stderr_txt>
]]>

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