Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:15:54 (2598855): wrapper (7.7.26015): starting
09:15:54 (2598855): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 09:15:54] Arguments: --nthreads 12
[2025-06-03 09:15:54] Threads: 12
[2025-06-03 09:15:54] Checking for CVMFS
[2025-06-03 09:15:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:15:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:15:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:15:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:15:57] 2.11.5.0 769502 22423 235948 146748 1 706 29189250 45568001 17274 130560 0 258346432 99.802 165837526 26848 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 09:15:57] CVMFS is ok
[2025-06-03 09:15:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:15:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:15:57] Further information can be found at the LHC@home message board.
[2025-06-03 09:15:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:15:57] Checking for apptainer binary...
[2025-06-03 09:15:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:15:57] Running /usr/bin/apptainer --version
[2025-06-03 09:15:57] apptainer version 1.4.0-1.el9
[2025-06-03 09:15:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:15:57] wns0035.triumf.lcg
[2025-06-03 09:15:57] apptainer works
[2025-06-03 09:15:57] Set ATHENA_PROC_NUMBER=12
[2025-06-03 09:15:57] Set ATHENA_CORE_NUMBER=12
[2025-06-03 09:15:57] Starting ATLAS job with PandaID=6677675980
[2025-06-03 09:15:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:20:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:20:45] 2025-06-03 16:20:28,582 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:20:45] 2025-06-03 16:20:28,586 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677675980/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard info from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:20:45] 2025-06-03 16:20:28,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:20:45] 2025-06-03 16:20:28,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:20:45] 2025-06-03 16:20:28,602 | WARNING  | wrong length of table data, x=[1748967455.0], y=[1910.0] (must be same and length>=4)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . Timing measurements:
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . get job = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . initial setup = 4 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload setup = 19 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-in = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload execution = 56 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-out = 1 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . log creation = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675980/pilotlog.txt
[2025-06-03 09:20:45] 2025-06-03 16:20:28,684 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 09:20:45] - Log from pilotlog.txt -
[2025-06-03 09:20:45] 2025-06-03 16:20:28,582 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:20:45] 2025-06-03 16:20:28,586 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677675980/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard info from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:20:45] 2025-06-03 16:20:28,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:20:45] 2025-06-03 16:20:28,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:20:45] 2025-06-03 16:20:28,602 | WARNING  | wrong length of table data, x=[1748967455.0], y=[1910.0] (must be same and length>=4)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . Timing measurements:
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . get job = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . initial setup = 4 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload setup = 19 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-in = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload execution = 56 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-out = 1 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . log creation = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675980/pilotlog.txt
[2025-06-03 09:20:45] 2025-06-03 16:20:28,685 | WARNING  | 
[2025-06-03 09:20:45] [begin log extracts]
[2025-06-03 09:20:45] - Log from pilotlog.txt -
[2025-06-03 09:20:45] 2025-06-03 16:20:28,582 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:20:45] 2025-06-03 16:20:28,586 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677675980/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard info from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:20:45] 2025-06-03 16:20:28,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:20:45] 2025-06-03 16:20:28,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:20:45] 2025-06-03 16:20:28,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:20:45] 2025-06-03 16:20:28,602 | WARNING  | wrong length of table data, x=[1748967455.0], y=[1910.0] (must be same and length>=4)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . Timing measurements:
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . get job = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . initial setup = 4 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload setup = 19 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-in = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . payload execution = 56 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . stage-out = 1 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | . log creation = 0 s
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | ..............................
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:20:45] 2025-06-03 16:20:28,603 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675980/pilotlog.txt
[2025-06-03 09:20:45] [end log extracts]
[2025-06-03 09:20:45] 2025-06-03 16:20:28,685 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 09:20:45] 2025-06-03 16:20:28,686 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 09:20:45] 2025-06-03 16:20:29,346 | INFO     | 
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | job summary report
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | --------------------------------------------------
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | PanDA job id: 6677675980
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | task id: 45006595
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 09:18:06,811 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | pilot state: failed 
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | transexitcode: 65
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | exeerrorcode: 65
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | exitcode: 65
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | cpuconsumptiontime: 18 s
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | nevents: 0
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | neventsw: 0
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | pid: 2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:29,347 | INFO     | pgrp: 2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | corecount: 12
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | event service: False
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | sizes: {0: 2405181, 10: 2405387, 11: 2405415, 79: 2428624, 80: 2432859, 81: 2432887, 212: 2433157}
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | --------------------------------------------------
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | 
[2025-06-03 09:20:45] 2025-06-03 16:20:29,348 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | job 6677675980 has completed (purged errors)
[2025-06-03 09:20:45] 2025-06-03 16:20:29,412 | INFO     | overall cleanup function is called
[2025-06-03 09:20:45] 2025-06-03 16:20:30,418 | INFO     | --- collectZombieJob: --- 10, [2612635]
[2025-06-03 09:20:45] 2025-06-03 16:20:30,419 | INFO     | zombie collector waiting for pid 2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:30,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:20:45] 2025-06-03 16:20:30,419 | INFO     | collected zombie processes
[2025-06-03 09:20:45] 2025-06-03 16:20:30,419 | INFO     | will attempt to kill all subprocesses of pid=2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:30,912 | INFO     | process IDs to be killed: [2612635] (in reverse order)
[2025-06-03 09:20:45] 2025-06-03 16:20:30,989 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:20:45] 2025-06-03 16:20:30,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:20:45] 2025-06-03 16:20:30,999 | INFO     | did not find any defunct processes belonging to 2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:31,008 | INFO     | did not find any defunct processes belonging to 2612635
[2025-06-03 09:20:45] 2025-06-03 16:20:31,009 | INFO     | ready for new job
[2025-06-03 09:20:45] 2025-06-03 16:20:31,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:20:45] 2025-06-03 16:20:31,010 | INFO     | **************************************
[2025-06-03 09:20:45] 2025-06-03 16:20:31,010 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:20:45] 2025-06-03 16:20:31,010 | INFO     | **************************************
[2025-06-03 09:20:45] 2025-06-03 16:20:31,010 | INFO     | 
[2025-06-03 09:20:45] 2025-06-03 16:20:31,012 | INFO     | architecture information:
[2025-06-03 09:20:45] 2025-06-03 16:20:31,012 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:20:45] 2025-06-03 16:20:31,082 | INFO     | cat /etc/os-release:
[2025-06-03 09:20:45] NAME="CentOS Linux"
[2025-06-03 09:20:45] VERSION="7 (Core)"
[2025-06-03 09:20:45] ID="centos"
[2025-06-03 09:20:45] ID_LIKE="rhel fedora"
[2025-06-03 09:20:45] VERSION_ID="7"
[2025-06-03 09:20:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:20:45] ANSI_COLOR="0;31"
[2025-06-03 09:20:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:20:45] HOME_URL="https://www.centos.org/"
[2025-06-03 09:20:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:20:45] 
[2025-06-03 09:20:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:20:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:20:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:20:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:20:45] 
[2025-06-03 09:20:45] 2025-06-03 16:20:31,083 | INFO     | **************************************
[2025-06-03 09:20:45] 2025-06-03 16:20:31,587 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 09:20:45] 2025-06-03 16:20:31,648 | INFO     | sufficient remaining disk space (1936004743168 B)
[2025-06-03 09:20:45] 2025-06-03 16:20:31,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:20:45] 2025-06-03 16:20:31,648 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:20:45] 2025-06-03 16:20:31,648 | INFO     | update_server=False
[2025-06-03 09:20:45] 2025-06-03 16:20:31,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:20:45] 2025-06-03 16:20:31,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:20:45] 2025-06-03 16:20:31,874 | INFO     | all payload control threads have been joined
[2025-06-03 09:20:45] 2025-06-03 16:20:32,277 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:20:45] 2025-06-03 16:20:32,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:20:45] 2025-06-03 16:20:32,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:20:45] 2025-06-03 16:20:32,356 | INFO     | all data control threads have been joined
[2025-06-03 09:20:45] 2025-06-03 16:20:32,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:20:45] 2025-06-03 16:20:32,360 | INFO     | aborting loop
[2025-06-03 09:20:45] 2025-06-03 16:20:32,561 | INFO     | all job control threads have been joined
[2025-06-03 09:20:45] 2025-06-03 16:20:32,655 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:32,881 | INFO     | [payload] control thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:32,949 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,363 | INFO     | [data] control thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,366 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,465 | INFO     | [job] validate thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,568 | INFO     | [job] control thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,628 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,661 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,776 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:33,782 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:34,086 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:34,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:20:45] 2025-06-03 16:20:34,253 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:35,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:20:45] 2025-06-03 16:20:35,127 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:39,132 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:20:45] 2025-06-03 16:20:39,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667118692160)>', '<ExcThread(monitor, started 140666587821824)>']
[2025-06-03 09:20:45] 2025-06-03 16:20:39,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:20:45] 2025-06-03 16:20:39,320 | INFO     | [monitor] control thread has ended
[2025-06-03 09:20:45] 2025-06-03 16:20:44,221 | INFO     | all workflow threads have been joined
[2025-06-03 09:20:45] 2025-06-03 16:20:44,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:20:45] 2025-06-03 16:20:44,222 | INFO     | traces error code: 0
[2025-06-03 09:20:45] 2025-06-03 16:20:44,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:20:45] 2025-06-03 16:20:44,679 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:20:45] 2025-06-03 16:20:44,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:20:45] 2025-06-03 16:20:44,715 [wrapper] pilotpid: 2604419
[2025-06-03 09:20:45] 2025-06-03 16:20:44,735 [wrapper] Pilot exit status: 0
[2025-06-03 09:20:45] 2025-06-03 16:20:44,788 [wrapper] pandaids: 6677675980
[2025-06-03 09:20:45] 2025-06-03 16:20:44,855 [wrapper] cleanup supervisor_pilot 2604425 2604420
[2025-06-03 09:20:45] 2025-06-03 16:20:44,859 [wrapper] Test setup, not cleaning
[2025-06-03 09:20:45] 2025-06-03 16:20:44,868 [wrapper] apfmon messages muted
[2025-06-03 09:20:45] 2025-06-03 16:20:44,875 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:20:45] 2025-06-03 16:20:44,887 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:20:45]  *** Error codes and diagnostics ***
[2025-06-03 09:20:45]     "exeErrorCode": 65,
[2025-06-03 09:20:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:20:45]     "pilotErrorCode": 1305,
[2025-06-03 09:20:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:20:45]  *** Listing of results directory ***
[2025-06-03 09:20:45] total 212316
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:52 pilot3.tar.gz
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:54 queuedata.json
[2025-06-03 09:20:45] -rwx------. 1 boinc boinc     37140 Jun  3 07:54 runpilot2-wrapper.sh
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:20:45] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:15 run_atlas
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:15 job.xml
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc      6602 Jun  3 09:15 init_data.xml
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc 213372366 Jun  3 09:15 EVNT.45006593._001456.pool.root.1
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:15 start_atlas.sh
[2025-06-03 09:20:45] drwxrwx--x. 2 boinc boinc      4096 Jun  3 09:15 shared
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc    508872 Jun  3 09:15 input.tar.gz
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:15 boinc_lockfile
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc      2525 Jun  3 09:15 pandaJob.out
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc    983735 Jun  3 09:16 agis_schedconf.cvmfs.json
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc   1603667 Jun  3 09:16 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:20:45] drwx------. 4 boinc boinc      4096 Jun  3 09:16 pilot3
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc       523 Jun  3 09:18 boinc_task_state.xml
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc       968 Jun  3 09:18 memory_monitor_summary.json
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc     20773 Jun  3 09:18 log.45006595._036247.job.log.tgz.1
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc      8338 Jun  3 09:20 heartbeat.json
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc        95 Jun  3 09:20 pilot_heartbeat.json
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc        22 Jun  3 09:20 wrapper_checkpoint.txt
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc      4352 Jun  3 09:20 pilotlog.txt
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:20 boinc_mmap_file
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc     78445 Jun  3 09:20 log.45006595._036247.job.log.1
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc       188 Jun  3 09:20 output.list
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:20 runtime_log
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc    122880 Jun  3 09:20 result.tar.gz
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc      8484 Jun  3 09:20 runtime_log.err
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc       645 Jun  3 09:20 4BRLDmODig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhfkKDmDVTNLo.diag
[2025-06-03 09:20:45] -rw-r--r--. 1 boinc boinc     21628 Jun  3 09:20 stderr.txt
[2025-06-03 09:20:45] No HITS result produced
[2025-06-03 09:20:45]  *** Contents of shared directory: ***
[2025-06-03 09:20:45] total 209012
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc 213372366 Jun  3 09:15 ATLAS.root_0
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:15 start_atlas.sh
[2025-06-03 09:20:45] -rw-r--r--. 2 boinc boinc    508872 Jun  3 09:15 input.tar.gz
[2025-06-03 09:20:45] -rw-------. 1 boinc boinc    122880 Jun  3 09:20 result.tar.gz
09:20:46 (2598855): run_atlas exited; CPU time 26.522269
09:20:46 (2598855): called boinc_finish(0)

</stderr_txt>
]]>

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