Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:36:12 (1479654): wrapper (7.7.26015): starting
09:36:12 (1479654): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 09:36:12] Arguments: --nthreads 12
[2025-06-03 09:36:12] Threads: 12
[2025-06-03 09:36:12] Checking for CVMFS
[2025-06-03 09:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:36:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:36:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:36:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:36:15] 2.11.5.0 740348 22462 223720 146749 1 297 45155239 45568000 17042 130560 0 221648129 99.810 136000474 26228 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 09:36:15] CVMFS is ok
[2025-06-03 09:36:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:36:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:36:15] Further information can be found at the LHC@home message board.
[2025-06-03 09:36:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:36:15] Checking for apptainer binary...
[2025-06-03 09:36:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:36:15] Running /usr/bin/apptainer --version
[2025-06-03 09:36:15] apptainer version 1.4.0-1.el9
[2025-06-03 09:36:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:36:16] wns0100.triumf.lcg
[2025-06-03 09:36:16] apptainer works
[2025-06-03 09:36:16] Set ATHENA_PROC_NUMBER=12
[2025-06-03 09:36:16] Set ATHENA_CORE_NUMBER=12
[2025-06-03 09:36:16] Starting ATLAS job with PandaID=6677675785
[2025-06-03 09:36:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:41:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard info from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | WARNING  | wrong length of table data, x=[1748968721.0], y=[1766.0] (must be same and length>=4)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . Timing measurements:
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . get job = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . initial setup = 6 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload setup = 21 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-in = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload execution = 51 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-out = 1 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . log creation = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675785/pilotlog.txt
[2025-06-03 09:41:51] 2025-06-03 16:41:38,133 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 09:41:51] - Log from pilotlog.txt -
[2025-06-03 09:41:51] 2025-06-03 16:41:38,064 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:41:51] 2025-06-03 16:41:38,064 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677675785/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard info from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | WARNING  | wrong length of table data, x=[1748968721.0], y=[1766.0] (must be same and length>=4)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . Timing measurements:
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . get job = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . initial setup = 6 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload setup = 21 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-in = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload execution = 51 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-out = 1 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . log creation = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675785/pilotlog.txt
[2025-06-03 09:41:51] 2025-06-03 16:41:38,133 | WARNING  | 
[2025-06-03 09:41:51] [begin log extracts]
[2025-06-03 09:41:51] - Log from pilotlog.txt -
[2025-06-03 09:41:51] 2025-06-03 16:41:38,064 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:41:51] 2025-06-03 16:41:38,064 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677675785/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard info from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:41:51] 2025-06-03 16:41:38,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | WARNING  | wrong length of table data, x=[1748968721.0], y=[1766.0] (must be same and length>=4)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . Timing measurements:
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . get job = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . initial setup = 6 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload setup = 21 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-in = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . payload execution = 51 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . stage-out = 1 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | . log creation = 0 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,066 | INFO     | ..............................
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:41:51] 2025-06-03 16:41:38,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677675785/pilotlog.txt
[2025-06-03 09:41:51] [end log extracts]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,133 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,134 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | 
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | job summary report
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | --------------------------------------------------
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | PanDA job id: 6677675785
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | task id: 45006595
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 09:39:02,226 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | pilot state: failed 
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | transexitcode: 65
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | exeerrorcode: 65
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | exitcode: 65
[2025-06-03 09:41:51] 2025-06-03 16:41:38,560 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | cpuconsumptiontime: 19 s
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | nevents: 0
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | neventsw: 0
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | pid: 1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | pgrp: 1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | corecount: 12
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | event service: False
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | sizes: {0: 2405010, 1: 2405038, 2: 2405237, 13: 2405237, 24: 2405499, 35: 2405527, 77: 2428916, 78: 2428920, 80: 2433183, 81: 2433211, 225: 2433353}
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | --------------------------------------------------
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | 
[2025-06-03 09:41:51] 2025-06-03 16:41:38,561 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 09:41:51] 2025-06-03 16:41:38,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:41:51] 2025-06-03 16:41:38,792 | INFO     | job 6677675785 has completed (purged errors)
[2025-06-03 09:41:51] 2025-06-03 16:41:38,793 | INFO     | overall cleanup function is called
[2025-06-03 09:41:51] 2025-06-03 16:41:39,751 | INFO     | PID=1490422 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 09:41:51] 2025-06-03 16:41:39,751 | INFO     | .. there are 41 such processes running
[2025-06-03 09:41:51] 2025-06-03 16:41:39,800 | INFO     | --- collectZombieJob: --- 10, [1507832]
[2025-06-03 09:41:51] 2025-06-03 16:41:39,800 | INFO     | zombie collector waiting for pid 1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:39,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:41:51] 2025-06-03 16:41:39,800 | INFO     | collected zombie processes
[2025-06-03 09:41:51] 2025-06-03 16:41:39,800 | INFO     | will attempt to kill all subprocesses of pid=1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:40,772 | INFO     | process IDs to be killed: [1507832] (in reverse order)
[2025-06-03 09:41:51] 2025-06-03 16:41:40,925 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:41:51] 2025-06-03 16:41:40,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:41:51] 2025-06-03 16:41:40,957 | INFO     | did not find any defunct processes belonging to 1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:40,981 | INFO     | did not find any defunct processes belonging to 1507832
[2025-06-03 09:41:51] 2025-06-03 16:41:40,981 | INFO     | ready for new job
[2025-06-03 09:41:51] 2025-06-03 16:41:40,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:41:51] 2025-06-03 16:41:40,997 | INFO     | **************************************
[2025-06-03 09:41:51] 2025-06-03 16:41:40,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:41:51] 2025-06-03 16:41:40,997 | INFO     | **************************************
[2025-06-03 09:41:51] 2025-06-03 16:41:40,997 | INFO     | 
[2025-06-03 09:41:51] 2025-06-03 16:41:40,999 | INFO     | architecture information:
[2025-06-03 09:41:51] 2025-06-03 16:41:41,019 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:41:51] 2025-06-03 16:41:41,069 | INFO     | cat /etc/os-release:
[2025-06-03 09:41:51] NAME="CentOS Linux"
[2025-06-03 09:41:51] VERSION="7 (Core)"
[2025-06-03 09:41:51] ID="centos"
[2025-06-03 09:41:51] ID_LIKE="rhel fedora"
[2025-06-03 09:41:51] VERSION_ID="7"
[2025-06-03 09:41:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:41:51] ANSI_COLOR="0;31"
[2025-06-03 09:41:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:41:51] HOME_URL="https://www.centos.org/"
[2025-06-03 09:41:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:41:51] 
[2025-06-03 09:41:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:41:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:41:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:41:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:41:51] 
[2025-06-03 09:41:51] 2025-06-03 16:41:41,069 | INFO     | **************************************
[2025-06-03 09:41:51] 2025-06-03 16:41:41,573 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 09:41:51] 2025-06-03 16:41:41,657 | INFO     | sufficient remaining disk space (1183321161728 B)
[2025-06-03 09:41:51] 2025-06-03 16:41:41,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:41:51] 2025-06-03 16:41:41,657 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:41:51] 2025-06-03 16:41:41,657 | INFO     | update_server=False
[2025-06-03 09:41:51] 2025-06-03 16:41:41,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:41:51] 2025-06-03 16:41:41,659 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:41:51] 2025-06-03 16:41:41,769 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:41:51] 2025-06-03 16:41:41,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:41:51] 2025-06-03 16:41:41,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:41:51] 2025-06-03 16:41:41,807 | INFO     | all data control threads have been joined
[2025-06-03 09:41:51] 2025-06-03 16:41:41,845 | INFO     | all job control threads have been joined
[2025-06-03 09:41:51] 2025-06-03 16:41:42,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:41:51] 2025-06-03 16:41:42,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:41:51] 2025-06-03 16:41:42,556 | INFO     | aborting loop
[2025-06-03 09:41:51] 2025-06-03 16:41:42,664 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,761 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,767 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,813 | INFO     | [data] control thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,851 | INFO     | [job] control thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:42,901 | INFO     | all payload control threads have been joined
[2025-06-03 09:41:51] 2025-06-03 16:41:42,930 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,104 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,176 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,333 | INFO     | [job] validate thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:41:51] 2025-06-03 16:41:43,562 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,628 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:43,907 | INFO     | [payload] control thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:44,256 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:44,535 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:45,668 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:41:51] 2025-06-03 16:41:45,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712173328192)>', '<ExcThread(monitor, started 140711626262272)>']
[2025-06-03 09:41:51] 2025-06-03 16:41:45,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:41:51] 2025-06-03 16:41:45,796 | INFO     | [monitor] control thread has ended
[2025-06-03 09:41:51] 2025-06-03 16:41:50,789 | INFO     | all workflow threads have been joined
[2025-06-03 09:41:51] 2025-06-03 16:41:50,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:41:51] 2025-06-03 16:41:50,789 | INFO     | traces error code: 0
[2025-06-03 09:41:51] 2025-06-03 16:41:50,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:41:51] 2025-06-03 16:41:50,929 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:41:51] 2025-06-03 16:41:50,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:41:51] 2025-06-03 16:41:50,934 [wrapper] pilotpid: 1490422
[2025-06-03 09:41:51] 2025-06-03 16:41:50,936 [wrapper] Pilot exit status: 0
[2025-06-03 09:41:51] 2025-06-03 16:41:50,947 [wrapper] pandaids: 6677675785
[2025-06-03 09:41:51] 2025-06-03 16:41:51,006 [wrapper] cleanup supervisor_pilot 1490438 1490423
[2025-06-03 09:41:51] 2025-06-03 16:41:51,009 [wrapper] Test setup, not cleaning
[2025-06-03 09:41:51] 2025-06-03 16:41:51,011 [wrapper] apfmon messages muted
[2025-06-03 09:41:51] 2025-06-03 16:41:51,013 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:41:51] 2025-06-03 16:41:51,016 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:41:51]  *** Error codes and diagnostics ***
[2025-06-03 09:41:51]     "exeErrorCode": 65,
[2025-06-03 09:41:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:41:51]     "pilotErrorCode": 1305,
[2025-06-03 09:41:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:41:51]  *** Listing of results directory ***
[2025-06-03 09:41:51] total 213216
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:52 pilot3.tar.gz
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:52 queuedata.json
[2025-06-03 09:41:51] -rwx------. 1 boinc boinc     37140 Jun  3 07:53 runpilot2-wrapper.sh
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:41:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:36 run_atlas
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:36 job.xml
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc 214297226 Jun  3 09:36 EVNT.45006593._001450.pool.root.1
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc      6602 Jun  3 09:36 init_data.xml
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:36 start_atlas.sh
[2025-06-03 09:41:51] drwxrwx--x. 2 boinc boinc      4096 Jun  3 09:36 shared
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc    508881 Jun  3 09:36 input.tar.gz
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:36 boinc_lockfile
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc      2525 Jun  3 09:36 pandaJob.out
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc    983734 Jun  3 09:36 agis_schedconf.cvmfs.json
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc   1603667 Jun  3 09:36 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:41:51] drwx------. 4 boinc boinc      4096 Jun  3 09:36 pilot3
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc       981 Jun  3 09:39 memory_monitor_summary.json
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc     21348 Jun  3 09:39 log.45006595._036085.job.log.tgz.1
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc        95 Jun  3 09:40 pilot_heartbeat.json
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc      8345 Jun  3 09:41 heartbeat.json
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc       523 Jun  3 09:41 boinc_task_state.xml
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:41 boinc_mmap_file
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc        22 Jun  3 09:41 wrapper_checkpoint.txt
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc      4352 Jun  3 09:41 pilotlog.txt
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc     80768 Jun  3 09:41 log.45006595._036085.job.log.1
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc       188 Jun  3 09:41 output.list
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:41 runtime_log
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc    122880 Jun  3 09:41 result.tar.gz
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc      8484 Jun  3 09:41 runtime_log.err
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc       644 Jun  3 09:41 mH4LDm5Big7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrekKDmyfhYem.diag
[2025-06-03 09:41:51] -rw-r--r--. 1 boinc boinc     21745 Jun  3 09:41 stderr.txt
[2025-06-03 09:41:51] No HITS result produced
[2025-06-03 09:41:51]  *** Contents of shared directory: ***
[2025-06-03 09:41:51] total 209912
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc 214297226 Jun  3 09:36 ATLAS.root_0
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:36 start_atlas.sh
[2025-06-03 09:41:51] -rw-r--r--. 2 boinc boinc    508881 Jun  3 09:36 input.tar.gz
[2025-06-03 09:41:51] -rw-------. 1 boinc boinc    122880 Jun  3 09:41 result.tar.gz
09:41:53 (1479654): run_atlas exited; CPU time 30.177578
09:41:53 (1479654): called boinc_finish(0)

</stderr_txt>
]]>

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